source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	61	.cvsignore	blob \| history \| raw
-rwxr-xr-x	22178	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	26539	AlignSeq.java	blob \| history \| raw
-rw-r--r--	8184	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	24605	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	94732	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	10838	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	2602	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3437	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	22929	Conservation.java	blob \| history \| raw
-rw-r--r--	36609	CrossRef.java	blob \| history \| raw
-rw-r--r--	28799	Dna.java	blob \| history \| raw
-rw-r--r--	9276	Finder.java	blob \| history \| raw
-rw-r--r--	11087	Grouping.java	blob \| history \| raw
-rw-r--r--	3426	NJTree.java	blob \| history \| raw
-rwxr-xr-x	5321	PCA.java	blob \| history \| raw
-rw-r--r--	5472	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12843	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	8994	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9223	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13506	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	9154	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	15084	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history