source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	111	.cvsignore	blob \| history \| raw
-rw-r--r--	2037	AlignedCodon.java	blob \| history \| raw
-rw-r--r--	11664	AlignedCodonFrame.java	blob \| history \| raw
-rwxr-xr-x	38352	Alignment.java	blob \| history \| raw
-rwxr-xr-x	36899	AlignmentAnnotation.java	blob \| history \| raw
-rwxr-xr-x	13990	AlignmentI.java	blob \| history \| raw
-rwxr-xr-x	7250	AlignmentOrder.java	blob \| history \| raw
-rw-r--r--	35656	AlignmentView.java	blob \| history \| raw
-rw-r--r--	1527	AnnotatedCollectionI.java	blob \| history \| raw
-rwxr-xr-x	4614	Annotation.java	blob \| history \| raw
-rwxr-xr-x	5341	BinaryNode.java	blob \| history \| raw
-rwxr-xr-x	4497	BinarySequence.java	blob \| history \| raw
-rw-r--r--	10838	CigarArray.java	blob \| history \| raw
-rw-r--r--	19530	CigarBase.java	blob \| history \| raw
-rw-r--r--	1697	CigarCigar.java	blob \| history \| raw
-rw-r--r--	1172	CigarSimple.java	blob \| history \| raw
-rw-r--r--	33637	ColumnSelection.java	blob \| history \| raw
-rwxr-xr-x	4614	DBRefEntry.java	blob \| history \| raw
-rwxr-xr-x	3629	DBRefSource.java	blob \| history \| raw
-rw-r--r--	2129	FeatureProperties.java	blob \| history \| raw
-rwxr-xr-x	2011	GraphLine.java	blob \| history \| raw
-rwxr-xr-x	6950	HiddenSequences.java	blob \| history \| raw
-rw-r--r--	242	IncompleteCodonException.java	blob \| history \| raw
-rw-r--r--	16029	Mapping.java	blob \| history \| raw
-rw-r--r--	999	NodeTransformI.java	blob \| history \| raw
-rwxr-xr-x	3542	PDBEntry.java	blob \| history \| raw
-rwxr-xr-x	1421	Provenance.java	blob \| history \| raw
-rwxr-xr-x	1331	ProvenanceEntry.java	blob \| history \| raw
-rwxr-xr-x	6533	SearchResults.java	blob \| history \| raw
-rw-r--r--	1502	SecondaryStructureAnnotation.java	blob \| history \| raw
-rw-r--r--	17474	SeqCigar.java	blob \| history \| raw
-rwxr-xr-x	28300	Sequence.java	blob \| history \| raw
-rw-r--r--	1799	SequenceCollectionI.java	blob \| history \| raw
-rwxr-xr-x	5949	SequenceFeature.java	blob \| history \| raw
-rwxr-xr-x	29647	SequenceGroup.java	blob \| history \| raw
-rwxr-xr-x	10595	SequenceI.java	blob \| history \| raw
-rwxr-xr-x	4035	SequenceNode.java	blob \| history \| raw
-rwxr-xr-x	1477	SequencePoint.java	blob \| history \| raw
-rw-r--r--	3535	StructureViewerModel.java	blob \| history \| raw
-rwxr-xr-x	2132	UniprotEntry.java	blob \| history \| raw
-rwxr-xr-x	1270	UniprotFile.java	blob \| history \| raw
-rwxr-xr-x	1336	UniprotProteinName.java	blob \| history \| raw
-rwxr-xr-x	1531	UniprotSequence.java	blob \| history \| raw
drwxr-xr-x	-	xdb	tree \| history