source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	4613	APQHandlers.java	blob \| history \| raw
-rw-r--r--	3080	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	167477	AlignFrame.java	blob \| history \| raw
-rw-r--r--	29632	AlignViewport.java	blob \| history \| raw
-rw-r--r--	49003	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13834	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24863	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9482	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	34621	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	33821	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19825	AppJmol.java	blob \| history \| raw
-rw-r--r--	5237	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	13976	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2788	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23287	BlogReader.java	blob \| history \| raw
-rw-r--r--	18837	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23179	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10068	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17222	Console.java	blob \| history \| raw
-rw-r--r--	16830	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6241	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10812	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	104967	Desktop.java	blob \| history \| raw
-rw-r--r--	4256	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2811	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	18279	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	54500	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	49952	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	11085	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	4217	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2781	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15246	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	15431	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3875	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2269	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3626	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	3729	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	9976	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10452	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2575	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24077	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7591	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11581	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20793	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6129	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	63954	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	44055	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6109	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7703	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15515	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22463	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4211	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	15803	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	61975	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	70577	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	30635	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14347	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	12165	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	23782	SplitFrame.java	blob \| history \| raw
-rw-r--r--	42431	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10388	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27292	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	7698	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26415	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23835	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	25804	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5195	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35310	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22178	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43554	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10371	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17315	WsPreferences.java	blob \| history \| raw