source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	7988	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	168773	AlignFrame.java	blob \| history \| raw
-rw-r--r--	30451	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48374	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18588	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13786	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24797	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9986	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35824	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	34264	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19586	AppJmol.java	blob \| history \| raw
-rw-r--r--	5264	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	14138	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2788	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23283	BlogReader.java	blob \| history \| raw
-rw-r--r--	17454	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23040	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10100	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17222	Console.java	blob \| history \| raw
-rw-r--r--	16846	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6263	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10868	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	106063	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21931	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1552	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	58692	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	50491	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10776	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	2770	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15538	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	14543	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3875	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	186969	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15684	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3626	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3729	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21542	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10771	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5927	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2575	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24077	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7650	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11778	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	21041	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6083	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	64263	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	43506	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6109	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7714	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15515	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17509	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	15117	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	62398	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	61549	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25431	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13958	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	12123	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	10322	SplashScreen.java	blob \| history \| raw
-rw-r--r--	23770	SplitFrame.java	blob \| history \| raw
-rw-r--r--	42825	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10388	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27595	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	27579	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22062	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	25940	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5195	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35310	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22202	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43554	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10437	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17311	WsPreferences.java	blob \| history \| raw