source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	7997	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	174039	AlignFrame.java	blob \| history \| raw
-rw-r--r--	31058	AlignViewport.java	blob \| history \| raw
-rw-r--r--	51788	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13796	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	25016	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9537	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35193	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	35044	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	20057	AppJmol.java	blob \| history \| raw
-rw-r--r--	5562	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20038	AppVarna.java	blob \| history \| raw
-rw-r--r--	14147	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2959	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23311	BlogReader.java	blob \| history \| raw
-rw-r--r--	21499	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23058	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10099	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1963	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17300	Console.java	blob \| history \| raw
-rw-r--r--	16759	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6297	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10931	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	108686	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21944	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1599	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	57692	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	50899	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10734	Finder.java	blob \| history \| raw
-rwxr-xr-x	12260	FontChooser.java	blob \| history \| raw
-rw-r--r--	3767	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	16028	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	16938	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3069	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1968	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2269	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3626	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3746	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21660	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10551	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5928	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2584	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24077	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	8654	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	12336	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20275	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6540	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	67032	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	49770	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6118	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7714	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15533	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22456	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	16267	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	66233	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	73453	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25297	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13958	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	13030	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	10508	SplashScreen.java	blob \| history \| raw
-rw-r--r--	23744	SplitFrame.java	blob \| history \| raw
-rw-r--r--	40370	StructureChooser.java	blob \| history \| raw
-rw-r--r--	14545	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27644	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26556	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22058	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26195	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5213	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35275	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22247	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43563	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10457	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17366	WsPreferences.java	blob \| history \| raw