source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	5526	APQHandlers.java	blob \| history \| raw
-rw-r--r--	7988	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	183166	AlignFrame.java	blob \| history \| raw
-rw-r--r--	33389	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48943	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13772	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24998	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	12132	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	40460	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	34849	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19605	AppJmol.java	blob \| history \| raw
-rw-r--r--	5562	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	14138	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2755	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23315	BlogReader.java	blob \| history \| raw
-rw-r--r--	18942	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23045	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10068	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17252	Console.java	blob \| history \| raw
-rw-r--r--	17416	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6297	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10868	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	96944	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21931	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1513	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	65419	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	51762	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10716	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	3767	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15172	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	16318	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	4077	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	3134	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3690	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3729	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21660	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	9826	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5927	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2575	OOMWarning.java	blob \| history \| raw
-rw-r--r--	33338	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7714	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11823	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20295	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6540	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5186	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	70318	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	50218	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6109	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7714	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15651	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22463	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	15831	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	64214	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	76785	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25653	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14347	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	12054	SliderPanel.java	blob \| history \| raw
-rw-r--r--	10428	SlivkaPreferences.java	blob \| history \| raw
-rwxr-xr-x	8316	SplashScreen.java	blob \| history \| raw
-rw-r--r--	33496	SplitFrame.java	blob \| history \| raw
-rw-r--r--	43094	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10388	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27639	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26556	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22058	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26168	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5162	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35354	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	23031	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	34567	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10511	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17480	WsPreferences.java	blob \| history \| raw