source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	7988	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	169860	AlignFrame.java	blob \| history \| raw
-rw-r--r--	30496	AlignViewport.java	blob \| history \| raw
-rw-r--r--	47694	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13772	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24965	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9537	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35022	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	35012	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19586	AppJmol.java	blob \| history \| raw
-rw-r--r--	5264	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	14138	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2788	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23283	BlogReader.java	blob \| history \| raw
-rw-r--r--	18906	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23040	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10100	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17222	Console.java	blob \| history \| raw
-rw-r--r--	16846	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6263	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10868	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	106720	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21931	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1552	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	57312	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	50616	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10716	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	2781	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15352	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	16889	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3875	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2269	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3626	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3729	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21542	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10771	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5927	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2575	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24077	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7650	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11827	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20274	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6083	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	65159	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	44741	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6109	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7714	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15515	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22456	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	15574	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	62874	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	72780	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25492	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13958	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	12089	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	10322	SplashScreen.java	blob \| history \| raw
-rw-r--r--	23770	SplitFrame.java	blob \| history \| raw
-rw-r--r--	42825	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10388	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27639	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26556	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22058	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	25940	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5195	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35310	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22202	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43554	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10437	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17311	WsPreferences.java	blob \| history \| raw