source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	3065	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	173756	AlignFrame.java	blob \| history \| raw
-rw-r--r--	32491	AlignViewport.java	blob \| history \| raw
-rw-r--r--	50697	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18577	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13928	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26137	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9361	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35483	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	28161	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	10150	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	31055	AppJmol.java	blob \| history \| raw
-rw-r--r--	5076	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19366	AppVarna.java	blob \| history \| raw
-rw-r--r--	13967	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2794	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23352	BlogReader.java	blob \| history \| raw
-rw-r--r--	31369	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16952	Console.java	blob \| history \| raw
-rw-r--r--	10575	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6131	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10758	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	23249	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	96022	Desktop.java	blob \| history \| raw
-rw-r--r--	4210	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2808	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15501	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	13312	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	51544	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10196	Finder.java	blob \| history \| raw
-rwxr-xr-x	9485	FontChooser.java	blob \| history \| raw
-rw-r--r--	4171	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2770	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11808	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	13807	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3954	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	15708	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	175630	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15350	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3566	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4287	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8378	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2614	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24406	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	12293	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20180	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6338	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3988	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	68183	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	34375	Preferences.java	blob \| history \| raw
-rw-r--r--	6965	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6319	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7953	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15659	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17216	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4165	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	13990	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23396	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	50986	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	30775	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14225	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8467	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	22193	SplitFrame.java	blob \| history \| raw
-rw-r--r--	36585	StructureChooser.java	blob \| history \| raw
-rw-r--r--	7011	StructureViewer.java	blob \| history \| raw
-rw-r--r--	14716	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	6040	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26331	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23499	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26884	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5325	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35373	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8289	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22009	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43166	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9919	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17571	WsPreferences.java	blob \| history \| raw