source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	175512	AlignFrame.java	blob \| history \| raw
-rw-r--r--	30623	AlignViewport.java	blob \| history \| raw
-rw-r--r--	43662	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17700	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13872	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24055	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8590	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	32135	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24793	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	9209	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	34903	AppJmol.java	blob \| history \| raw
-rw-r--r--	4959	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	12469	AppVarna.java	blob \| history \| raw
-rw-r--r--	26284	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2671	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23283	BlogReader.java	blob \| history \| raw
-rw-r--r--	32447	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16451	Console.java	blob \| history \| raw
-rw-r--r--	5610	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	6947	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22970	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	87451	Desktop.java	blob \| history \| raw
-rw-r--r--	3913	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2620	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15043	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12746	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50467	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	9357	Finder.java	blob \| history \| raw
-rwxr-xr-x	7157	FontChooser.java	blob \| history \| raw
-rw-r--r--	3318	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	1894	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11725	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12900	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3415	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14955	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	152945	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15120	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2057	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4237	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	7974	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2640	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23792	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11230	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19958	PCAPanel.java	blob \| history \| raw
-rw-r--r--	5409	PDBSearchPanel.java	blob \| history \| raw
-rwxr-xr-x	6338	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3988	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	76147	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	31753	Preferences.java	blob \| history \| raw
-rw-r--r--	6309	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7896	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15717	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	16642	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4177	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12725	ScalePanel.java	blob \| history \| raw
-rw-r--r--	18632	ScriptWindow.java	blob \| history \| raw
-rwxr-xr-x	23220	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	47812	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	26267	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13117	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8354	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	17921	SplitFrame.java	blob \| history \| raw
-rw-r--r--	20055	StructureChooser.java	blob \| history \| raw
-rw-r--r--	4750	StructureViewer.java	blob \| history \| raw
-rw-r--r--	4987	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5743	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	24960	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23307	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26756	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5266	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35078	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8595	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	24181	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43049	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9916	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17575	WsPreferences.java	blob \| history \| raw