WSTester updated to work plus hopefully all the other changes that need to go into...
[jabaws.git] / binaries / src / ViennaRNA / doc / html / group__dos.html
1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
2 <html xmlns="http://www.w3.org/1999/xhtml">
3 <head>
4 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
5 <meta http-equiv="X-UA-Compatible" content="IE=9"/>
6 <title>RNAlib-2.1.2: Compute the Density of States</title>
7 <link href="tabs.css" rel="stylesheet" type="text/css"/>
8 <script type="text/javascript" src="jquery.js"></script>
9 <script type="text/javascript" src="dynsections.js"></script>
10 <link href="navtree.css" rel="stylesheet" type="text/css"/>
11 <script type="text/javascript" src="resize.js"></script>
12 <script type="text/javascript" src="navtree.js"></script>
13 <script type="text/javascript">
14   $(document).ready(initResizable);
15 </script>
16 <link href="doxygen.css" rel="stylesheet" type="text/css" />
17 </head>
18 <body>
19 <div id="top"><!-- do not remove this div, it is closed by doxygen! -->
20 <div id="titlearea">
21 <table cellspacing="0" cellpadding="0">
22  <tbody>
23  <tr style="height: 56px;">
24   <td style="padding-left: 0.5em;">
25    <div id="projectname">RNAlib-2.1.2
26    </div>
27   </td>
28  </tr>
29  </tbody>
30 </table>
31 </div>
32 <!-- end header part -->
33 <!-- Generated by Doxygen 1.8.1.1 -->
34   <div id="navrow1" class="tabs">
35     <ul class="tablist">
36       <li><a href="index.html"><span>Main&#160;Page</span></a></li>
37       <li><a href="pages.html"><span>Related&#160;Pages</span></a></li>
38       <li><a href="modules.html"><span>Modules</span></a></li>
39       <li><a href="annotated.html"><span>Data&#160;Structures</span></a></li>
40       <li><a href="files.html"><span>Files</span></a></li>
41     </ul>
42   </div>
43 </div><!-- top -->
44 <div id="side-nav" class="ui-resizable side-nav-resizable">
45   <div id="nav-tree">
46     <div id="nav-tree-contents">
47     </div>
48   </div>
49   <div id="splitbar" style="-moz-user-select:none;" 
50        class="ui-resizable-handle">
51   </div>
52 </div>
53 <script type="text/javascript">
54 $(document).ready(function(){initNavTree('group__dos.html','');});
55 </script>
56 <div id="doc-content">
57 <div class="header">
58   <div class="summary">
59 <a href="#var-members">Variables</a>  </div>
60   <div class="headertitle">
61 <div class="title">Compute the Density of States</div>  </div>
62 <div class="ingroups"><a class="el" href="group__class__fold.html">Classified Dynamic Programming</a></div></div><!--header-->
63 <div class="contents">
64 <div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
65   <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Collaboration diagram for Compute the Density of States:</div>
66 <div id="dynsection-0-summary" class="dynsummary" style="display:block;">
67 </div>
68 <div id="dynsection-0-content" class="dyncontent" style="display:none;">
69 <center><table><tr><td><img src="group__dos.png" border="0" alt="" usemap="#group____dos"/>
70 <map name="group____dos" id="group____dos">
71 <area shape="rect" id="node1" href="group__class__fold.html" title="Classified Dynamic\l Programming" alt="" coords="6,5,149,46"/></map>
72 </td></tr></table></center>
73 </div>
74 <table class="memberdecls">
75 <tr class="heading"><td colspan="2"><h2><a name="var-members"></a>
76 Variables</h2></td></tr>
77 <tr class="memitem:ga937634a76b46a22530a74906f1957a9e"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="group__dos.html#ga937634a76b46a22530a74906f1957a9e">density_of_states</a> [<a class="el" href="data__structures_8h.html#a5ec740b80afb4906ba4311dbd8ddbd89">MAXDOS</a>+1]</td></tr>
78 <tr class="memdesc:ga937634a76b46a22530a74906f1957a9e"><td class="mdescLeft">&#160;</td><td class="mdescRight">The Density of States.  <a href="#ga937634a76b46a22530a74906f1957a9e"></a><br/></td></tr>
79 </table>
80 <hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
81 <hr/><h2>Variable Documentation</h2>
82 <a class="anchor" id="ga937634a76b46a22530a74906f1957a9e"></a>
83 <div class="memitem">
84 <div class="memproto">
85       <table class="memname">
86         <tr>
87           <td class="memname">int density_of_states[<a class="el" href="data__structures_8h.html#a5ec740b80afb4906ba4311dbd8ddbd89">MAXDOS</a>+1]</td>
88         </tr>
89       </table>
90 </div><div class="memdoc">
91
92 <p>The Density of States. </p>
93 <p>This array contains the density of states for an RNA sequences after a call to <a class="el" href="group__subopt__wuchty.html#ga554dedfcdb249fdf151caade58666e4d" title="Returns list of subopt structures or writes to fp.">subopt_par()</a>, <a class="el" href="group__subopt__wuchty.html#ga700f662506a233e42dd7fda74fafd40e" title="Returns list of subopt structures or writes to fp.">subopt()</a> or <a class="el" href="group__subopt__wuchty.html#ga8634516e4740e0b6c9a46d2bae940340" title="Returns list of circular subopt structures or writes to fp.">subopt_circ()</a>.</p>
94 <dl class="section pre"><dt>Precondition:</dt><dd>Call one of the functions <a class="el" href="group__subopt__wuchty.html#ga554dedfcdb249fdf151caade58666e4d" title="Returns list of subopt structures or writes to fp.">subopt_par()</a>, <a class="el" href="group__subopt__wuchty.html#ga700f662506a233e42dd7fda74fafd40e" title="Returns list of subopt structures or writes to fp.">subopt()</a> or <a class="el" href="group__subopt__wuchty.html#ga8634516e4740e0b6c9a46d2bae940340" title="Returns list of circular subopt structures or writes to fp.">subopt_circ()</a> prior accessing the contents of this array </dd></dl>
95 <dl class="section see"><dt>See also:</dt><dd><a class="el" href="group__subopt__wuchty.html#ga554dedfcdb249fdf151caade58666e4d" title="Returns list of subopt structures or writes to fp.">subopt_par()</a>, <a class="el" href="group__subopt__wuchty.html#ga700f662506a233e42dd7fda74fafd40e" title="Returns list of subopt structures or writes to fp.">subopt()</a>, <a class="el" href="group__subopt__wuchty.html#ga8634516e4740e0b6c9a46d2bae940340" title="Returns list of circular subopt structures or writes to fp.">subopt_circ()</a> </dd></dl>
96
97 </div>
98 </div>
99 </div><!-- contents -->
100 </div><!-- doc-content -->
101 <!-- start footer part -->
102 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
103   <ul>
104     <li class="footer">Generated on Wed Jul 24 2013 13:39:00 for RNAlib-2.1.2 by
105     <a href="http://www.doxygen.org/index.html">
106     <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
107   </ul>
108 </div>
109 </body>
110 </html>