Wrapper for Clustal Omega.
[jabaws.git] / binaries / src / clustalo / src / hhalign / Makefile.am
1 # Some useful automake documentation:
2 # http://www.openismus.com/documents/linux/automake/automake.shtml
3 # http://www.bioinf.uni-freiburg.de/~mmann/HowTo/automake.html
4
5 #SUBDIRS = 
6 #EXTRA_DIST =
7 # LDADD = foofiles/libfoo.a
8
9 AM_CXXFLAGS = -fno-strict-aliasing -DCLUSTALO -DCLUSTALO_NOFILE -DDEFAULT_FILTER=90 @OPENMP_CXXFLAGS@ @AM_CXXFLAGS@ 
10
11 noinst_LTLIBRARIES = libhhalign.la
12
13 libhhalign_la_SOURCES =  hhalign.cpp hhalign.h \
14         hash-C.h hash.h hhdecl-C.h hhfunc-C.h hhfunc.h \
15         hhmatrices-C.h hhutil-C.h \
16         hhalignment-C.h hhalignment.h \
17         hhfullalignment-C.h hhfullalignment.h \
18         hhhalfalignment-C.h hhhalfalignment.h \
19         hhhit-C.h hhhit.h hhhitlist-C.h hhhitlist.h \
20         hhhmm-C.h hhhmm.h \
21         util-C.h list-C.h list.h \
22         general.h
23
24 library_includedir=$(includedir)/clustalo/hhalign
25
26 library_include_HEADERS = general.h hhfunc.h