WSTester updated to work plus hopefully all the other changes that need to go into...

[jabaws.git] / binaries / src / ViennaRNA / H / aln_util.h

diff --git a/binaries/src/ViennaRNA/H/aln_util.h b/binaries/src/ViennaRNA/H/aln_util.h
new file mode 100644 (file)
index 0000000..e1871e2
--- /dev/null
+++ b/binaries/src/ViennaRNA/H/aln_util.h
@@ -0,0 +1,10 @@
+#ifndef __VIENNA_RNA_PACKAGE_ALN_UTIL_H__
+#define __VIENNA_RNA_PACKAGE_ALN_UTIL_H__
+
+int read_clustal( FILE *clust,
+                  char *AlignedSeqs[],
+                  char *names[]);
+/*@only@*/ /*@notnull@*/ char *consensus(const char *AS[]);
+/*@only@*/ /*@notnull@*/ char *consens_mis(const char *AS[]);
+
+#endif