WSTester updated to work plus hopefully all the other changes that need to go into...

[jabaws.git] / binaries / src / ViennaRNA / RNAforester / src / Makefile.am

diff --git a/binaries/src/ViennaRNA/RNAforester/src/Makefile.am b/binaries/src/ViennaRNA/RNAforester/src/Makefile.am
new file mode 100644 (file)
index 0000000..eb67e8e
--- /dev/null
+++ b/binaries/src/ViennaRNA/RNAforester/src/Makefile.am
@@ -0,0 +1,62 @@
+## Process this file with automake to produce Makefile.in
+
+bin_PROGRAMS = RNAforester 
+
+RNAforester_SOURCES = \
+       algebra.h\
+       alignment.h\
+       Arguments.cpp\
+       Arguments.h\
+       debug.h\
+       fold.h\
+       fold_vars.h\
+       glib.c\
+       graphtypes.h\
+       main.cpp\
+       matrix.h\
+       misc.h\
+       part_func.h\
+       ppforestali.h\
+       ppforestbase.cpp\
+       ppforestbase.h\
+       ppforest.h\
+       ppforestsz.h\
+       progressive_align.h\
+       progressive_align.cpp\
+       rna_profile_alignment.h\
+       rna_profile_alignment.cpp\
+       rna_alignment.cpp\
+       rna_alignment.h\
+       rna_algebra.h\
+       rna_algebra.cpp\
+       rna_alphabet.cpp\
+       rna_alphabet.h\
+       rnaforest.cpp\
+       rnaforest.h\
+       rnaforestsz.cpp\
+       rnaforestsz.h\
+       rnafuncs.cpp\
+       rnafuncs.h\
+       rnaforester_options.h\
+       rnaforester_options.cpp\
+       treeedit.h\
+       types.h\
+       utils.h\
+       wmatch.h\
+       wmatch.c
+
+#INCLUDES = -I${includedir}
+
+EXTRA_DIST = \
+       alignment.t.cpp\
+       misc.t.cpp\
+       ppforest.t.cpp\
+       ppforestsz.t.cpp\
+       treeedit.t.cpp\
+       match.defs\
+       pairs.c\
+       pointer.c\
+       readgraph.c\
+       term.c\
+       unpairs.c
+