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+ <li><a href="annotated.html"><span>Data Structures</span></a></li>
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+</script>
+<div id="doc-content">
+<div class="contents">
+<div class="textblock">Here is a list of all documented functions, variables, defines, enums, and typedefs with links to the documentation:</div>
+
+<h3><a class="anchor" id="index_a"></a>- a -</h3><ul>
+<li>add_root()
+: <a class="el" href="RNAstruct_8h.html#a880d33066dd95441e5fbb73c57ed1c3e">RNAstruct.h</a>
+</li>
+<li>alifold()
+: <a class="el" href="group__consensus__mfe__fold.html#ga4cf00f0659e5f0480335d69e797f05b1">alifold.h</a>
+</li>
+<li>aligned_line
+: <a class="el" href="dist__vars_8h.html#ac1605fe3448ad0a0b809c4fb8f6a854a">dist_vars.h</a>
+</li>
+<li>aliLfold()
+: <a class="el" href="group__local__consensus__fold.html#ga20a173a3cdb83f5d1778e36c1a6b1f2b">Lfold.h</a>
+</li>
+<li>alimake_pair_table()
+: <a class="el" href="utils_8h.html#a3c81b3967056c3888b8472b65fbb16f5">utils.h</a>
+</li>
+<li>alipbacktrack()
+: <a class="el" href="group__consensus__stochbt.html#ga0df40248788f0fb17ebdc59d74116d1c">alifold.h</a>
+</li>
+<li>alipf_circ_fold()
+: <a class="el" href="group__consensus__pf__fold.html#ga6b4dde1d43b79ab3753508c46cf50363">alifold.h</a>
+</li>
+<li>alipf_fold()
+: <a class="el" href="group__consensus__pf__fold.html#gad32ded7d753ccaf211ab35782d1f42a9">alifold.h</a>
+</li>
+<li>alipf_fold_par()
+: <a class="el" href="group__consensus__pf__fold.html#ga4d2ff54d8210fc7cceeeff389d4dbd1d">alifold.h</a>
+</li>
+<li>aliPS_color_aln()
+: <a class="el" href="PS__dot_8h.html#aab48d4dac655d688abe921389ac2847c">PS_dot.h</a>
+</li>
+<li>alloc_sequence_arrays()
+: <a class="el" href="group__consensus__fold.html#ga8a560930f7f2582cc3967723a86cfdfa">alifold.h</a>
+</li>
+<li>assign_plist_from_db()
+: <a class="el" href="fold_8h.html#adaa59b81664e2e36cb9932e891558fae">fold.h</a>
+</li>
+<li>assign_plist_from_pr()
+: <a class="el" href="group__pf__fold.html#ga03e15e831a31b1154855ab47edbdb019">part_func.h</a>
+</li>
+</ul>
+</div><!-- contents -->
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+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+ <li class="footer">Generated on Wed Jul 24 2013 13:39:00 for RNAlib-2.1.2 by
+ <a href="http://www.doxygen.org/index.html">
+ <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
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