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WSTester updated to work plus hopefully all the other changes that need to go into...
[jabaws.git] / binaries / src / ViennaRNA / doc / html / globals_0x63.html
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
+<title>RNAlib-2.1.2: Globals</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="resize.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<script type="text/javascript">
+  $(document).ready(initResizable);
+</script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr style="height: 56px;">
+  <td style="padding-left: 0.5em;">
+   <div id="projectname">RNAlib-2.1.2
+   </div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.8.1.1 -->
+  <div id="navrow1" class="tabs">
+    <ul class="tablist">
+      <li><a href="index.html"><span>Main&#160;Page</span></a></li>
+      <li><a href="pages.html"><span>Related&#160;Pages</span></a></li>
+      <li><a href="modules.html"><span>Modules</span></a></li>
+      <li><a href="annotated.html"><span>Data&#160;Structures</span></a></li>
+      <li class="current"><a href="files.html"><span>Files</span></a></li>
+    </ul>
+  </div>
+  <div id="navrow2" class="tabs2">
+    <ul class="tablist">
+      <li><a href="files.html"><span>File&#160;List</span></a></li>
+      <li class="current"><a href="globals.html"><span>Globals</span></a></li>
+    </ul>
+  </div>
+  <div id="navrow3" class="tabs2">
+    <ul class="tablist">
+      <li class="current"><a href="globals.html"><span>All</span></a></li>
+      <li><a href="globals_func.html"><span>Functions</span></a></li>
+      <li><a href="globals_vars.html"><span>Variables</span></a></li>
+      <li><a href="globals_defs.html"><span>Macros</span></a></li>
+    </ul>
+  </div>
+  <div id="navrow4" class="tabs3">
+    <ul class="tablist">
+      <li><a href="globals.html#index_a"><span>a</span></a></li>
+      <li><a href="globals_0x62.html#index_b"><span>b</span></a></li>
+      <li class="current"><a href="globals_0x63.html#index_c"><span>c</span></a></li>
+      <li><a href="globals_0x64.html#index_d"><span>d</span></a></li>
+      <li><a href="globals_0x65.html#index_e"><span>e</span></a></li>
+      <li><a href="globals_0x66.html#index_f"><span>f</span></a></li>
+      <li><a href="globals_0x67.html#index_g"><span>g</span></a></li>
+      <li><a href="globals_0x68.html#index_h"><span>h</span></a></li>
+      <li><a href="globals_0x69.html#index_i"><span>i</span></a></li>
+      <li><a href="globals_0x6a.html#index_j"><span>j</span></a></li>
+      <li><a href="globals_0x6b.html#index_k"><span>k</span></a></li>
+      <li><a href="globals_0x6c.html#index_l"><span>l</span></a></li>
+      <li><a href="globals_0x6d.html#index_m"><span>m</span></a></li>
+      <li><a href="globals_0x6e.html#index_n"><span>n</span></a></li>
+      <li><a href="globals_0x6f.html#index_o"><span>o</span></a></li>
+      <li><a href="globals_0x70.html#index_p"><span>p</span></a></li>
+      <li><a href="globals_0x72.html#index_r"><span>r</span></a></li>
+      <li><a href="globals_0x73.html#index_s"><span>s</span></a></li>
+      <li><a href="globals_0x74.html#index_t"><span>t</span></a></li>
+      <li><a href="globals_0x75.html#index_u"><span>u</span></a></li>
+      <li><a href="globals_0x76.html#index_v"><span>v</span></a></li>
+      <li><a href="globals_0x77.html#index_w"><span>w</span></a></li>
+      <li><a href="globals_0x78.html#index_x"><span>x</span></a></li>
+      <li><a href="globals_0x7a.html#index_z"><span>z</span></a></li>
+    </ul>
+  </div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+$(document).ready(function(){initNavTree('globals_0x63.html','');});
+</script>
+<div id="doc-content">
+<div class="contents">
+<div class="textblock">Here is a list of all documented functions, variables, defines, enums, and typedefs with links to the documentation:</div>
+
+<h3><a class="anchor" id="index_c"></a>- c -</h3><ul>
+<li>centroid()
+: <a class="el" href="part__func_8h.html#ae89a63bd83e75a80b2ba36d20b31ce81">part_func.h</a>
+</li>
+<li>circ
+: <a class="el" href="fold__vars_8h.html#af9202a1a09f5828dc731e2d9a10fa111">fold_vars.h</a>
+</li>
+<li>circalifold()
+: <a class="el" href="group__consensus__mfe__fold.html#gadbd3b0b1c144cbfb4efe704b2b260f96">alifold.h</a>
+</li>
+<li>circfold()
+: <a class="el" href="group__mfe__fold.html#ga4ac63ab3e8d9a80ced28b8052d94e423">fold.h</a>
+</li>
+<li>co_pf_fold()
+: <a class="el" href="group__pf__cofold.html#gaa86a5f998789ed71813d23d7307a791b">part_func_co.h</a>
+</li>
+<li>co_pf_fold_par()
+: <a class="el" href="group__pf__cofold.html#gabd873b450832ab5f21101fc5ab354d21">part_func_co.h</a>
+</li>
+<li>cofold()
+: <a class="el" href="group__mfe__cofold.html#gabc8517f22cfe70595ee81fc837910d52">cofold.h</a>
+</li>
+<li>cofold_par()
+: <a class="el" href="group__mfe__cofold.html#gafe430060533f14b11fc611f60b3f1f6f">cofold.h</a>
+</li>
+<li>compute_probabilities()
+: <a class="el" href="group__pf__cofold.html#ga15ae04ac5ab84e876dcf0093120cb617">part_func_co.h</a>
+</li>
+<li>constrain_ptypes()
+: <a class="el" href="utils_8h.html#a36c3a6c3218b041f992052767bc74549">utils.h</a>
+</li>
+<li>convert_parameter_file()
+: <a class="el" href="group__energy__parameters__convert.html#gafbe538bc4eb2cf2a33326e1010005f8a">convert_epars.h</a>
+</li>
+<li>copy_pair_table()
+: <a class="el" href="utils_8h.html#afeaa6d68eef3a99d0a7aa08aa91c6601">utils.h</a>
+</li>
+<li>cost_matrix
+: <a class="el" href="dist__vars_8h.html#ab65d8ff14c6937612212526a60f59b3c">dist_vars.h</a>
+</li>
+<li>csv
+: <a class="el" href="fold__vars_8h.html#af2763d55a74663a5e60652b8880baa5b">fold_vars.h</a>
+</li>
+<li>cut_point
+: <a class="el" href="fold__vars_8h.html#ab9b2c3a37a5516614c06d0ab54b97cda">fold_vars.h</a>
+, <a class="el" href="fold_8h.html#ab9b2c3a37a5516614c06d0ab54b97cda">fold.h</a>
+</li>
+<li>cv_fact
+: <a class="el" href="group__consensus__fold.html#gaf3cbac6ff5d706d6e414677841ddf94c">alifold.h</a>
+</li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated on Wed Jul 24 2013 13:39:00 for RNAlib-2.1.2 by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
+  </ul>
+</div>
+</body>
+</html>