WSTester updated to work plus hopefully all the other changes that need to go into...
[jabaws.git] / binaries / src / ViennaRNA / doc / html / group__dos.html
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+<title>RNAlib-2.1.2: Compute the Density of States</title>
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+ <tr style="height: 56px;">
+  <td style="padding-left: 0.5em;">
+   <div id="projectname">RNAlib-2.1.2
+   </div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
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+<!-- Generated by Doxygen 1.8.1.1 -->
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+</script>
+<div id="doc-content">
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+<a href="#var-members">Variables</a>  </div>
+  <div class="headertitle">
+<div class="title">Compute the Density of States</div>  </div>
+<div class="ingroups"><a class="el" href="group__class__fold.html">Classified Dynamic Programming</a></div></div><!--header-->
+<div class="contents">
+<div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
+  <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Collaboration diagram for Compute the Density of States:</div>
+<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
+</div>
+<div id="dynsection-0-content" class="dyncontent" style="display:none;">
+<center><table><tr><td><img src="group__dos.png" border="0" alt="" usemap="#group____dos"/>
+<map name="group____dos" id="group____dos">
+<area shape="rect" id="node1" href="group__class__fold.html" title="Classified Dynamic\l Programming" alt="" coords="6,5,149,46"/></map>
+</td></tr></table></center>
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+<tr class="heading"><td colspan="2"><h2><a name="var-members"></a>
+Variables</h2></td></tr>
+<tr class="memitem:ga937634a76b46a22530a74906f1957a9e"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="group__dos.html#ga937634a76b46a22530a74906f1957a9e">density_of_states</a> [<a class="el" href="data__structures_8h.html#a5ec740b80afb4906ba4311dbd8ddbd89">MAXDOS</a>+1]</td></tr>
+<tr class="memdesc:ga937634a76b46a22530a74906f1957a9e"><td class="mdescLeft">&#160;</td><td class="mdescRight">The Density of States.  <a href="#ga937634a76b46a22530a74906f1957a9e"></a><br/></td></tr>
+</table>
+<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
+<hr/><h2>Variable Documentation</h2>
+<a class="anchor" id="ga937634a76b46a22530a74906f1957a9e"></a>
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">int density_of_states[<a class="el" href="data__structures_8h.html#a5ec740b80afb4906ba4311dbd8ddbd89">MAXDOS</a>+1]</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>The Density of States. </p>
+<p>This array contains the density of states for an RNA sequences after a call to <a class="el" href="group__subopt__wuchty.html#ga554dedfcdb249fdf151caade58666e4d" title="Returns list of subopt structures or writes to fp.">subopt_par()</a>, <a class="el" href="group__subopt__wuchty.html#ga700f662506a233e42dd7fda74fafd40e" title="Returns list of subopt structures or writes to fp.">subopt()</a> or <a class="el" href="group__subopt__wuchty.html#ga8634516e4740e0b6c9a46d2bae940340" title="Returns list of circular subopt structures or writes to fp.">subopt_circ()</a>.</p>
+<dl class="section pre"><dt>Precondition:</dt><dd>Call one of the functions <a class="el" href="group__subopt__wuchty.html#ga554dedfcdb249fdf151caade58666e4d" title="Returns list of subopt structures or writes to fp.">subopt_par()</a>, <a class="el" href="group__subopt__wuchty.html#ga700f662506a233e42dd7fda74fafd40e" title="Returns list of subopt structures or writes to fp.">subopt()</a> or <a class="el" href="group__subopt__wuchty.html#ga8634516e4740e0b6c9a46d2bae940340" title="Returns list of circular subopt structures or writes to fp.">subopt_circ()</a> prior accessing the contents of this array </dd></dl>
+<dl class="section see"><dt>See also:</dt><dd><a class="el" href="group__subopt__wuchty.html#ga554dedfcdb249fdf151caade58666e4d" title="Returns list of subopt structures or writes to fp.">subopt_par()</a>, <a class="el" href="group__subopt__wuchty.html#ga700f662506a233e42dd7fda74fafd40e" title="Returns list of subopt structures or writes to fp.">subopt()</a>, <a class="el" href="group__subopt__wuchty.html#ga8634516e4740e0b6c9a46d2bae940340" title="Returns list of circular subopt structures or writes to fp.">subopt_circ()</a> </dd></dl>
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