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+<a href="#func-members">Functions</a> |
+<a href="#var-members">Variables</a> </div>
+ <div class="headertitle">
+<div class="title">inverse.h File Reference<div class="ingroups"><a class="el" href="group__inverse__fold.html">Searching Sequences for Predefined Structures</a></div></div> </div>
+</div><!--header-->
+<div class="contents">
+
+<p>Inverse folding routines.
+<a href="#details">More...</a></p>
+
+<p><a href="inverse_8h_source.html">Go to the source code of this file.</a></p>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2><a name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:ga7af026de55d4babad879f2c92559cbbc"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="group__inverse__fold.html#ga7af026de55d4babad879f2c92559cbbc">inverse_fold</a> (char *start, const char *target)</td></tr>
+<tr class="memdesc:ga7af026de55d4babad879f2c92559cbbc"><td class="mdescLeft"> </td><td class="mdescRight">Find sequences with predefined structure. <a href="group__inverse__fold.html#ga7af026de55d4babad879f2c92559cbbc"></a><br/></td></tr>
+<tr class="memitem:gaeef52ecbf2a2450ad585a344f9826806"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="group__inverse__fold.html#gaeef52ecbf2a2450ad585a344f9826806">inverse_pf_fold</a> (char *start, const char *target)</td></tr>
+<tr class="memdesc:gaeef52ecbf2a2450ad585a344f9826806"><td class="mdescLeft"> </td><td class="mdescRight">Find sequence that maximizes probability of a predefined structure. <a href="group__inverse__fold.html#gaeef52ecbf2a2450ad585a344f9826806"></a><br/></td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2><a name="var-members"></a>
+Variables</h2></td></tr>
+<tr class="memitem:ga8f791e7740a5a28b9f6fafb4e60301d9"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ga8f791e7740a5a28b9f6fafb4e60301d9"></a>
+char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__inverse__fold.html#ga8f791e7740a5a28b9f6fafb4e60301d9">symbolset</a></td></tr>
+<tr class="memdesc:ga8f791e7740a5a28b9f6fafb4e60301d9"><td class="mdescLeft"> </td><td class="mdescRight">This global variable points to the allowed bases, initially "AUGC". It can be used to design sequences from reduced alphabets. <br/></td></tr>
+<tr class="memitem:ga7f17d3b169af048d32bb185039a9c09c"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="group__inverse__fold.html#ga7f17d3b169af048d32bb185039a9c09c">final_cost</a></td></tr>
+<tr class="memitem:ga7ec4ba51f86e1717a1e174264e4a75ce"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="group__inverse__fold.html#ga7ec4ba51f86e1717a1e174264e4a75ce">give_up</a></td></tr>
+<tr class="memitem:gafcfc65fba01b9cca5946726ed9057a63"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="group__inverse__fold.html#gafcfc65fba01b9cca5946726ed9057a63">inv_verbose</a></td></tr>
+</table>
+<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
+<div class="textblock"><p>Inverse folding routines. </p>
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