WSTester updated to work plus hopefully all the other changes that need to go into...
[jabaws.git] / binaries / src / ViennaRNA / doc / html / stringdist_8h.html
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
+<title>RNAlib-2.1.2: /home/mescalin/ronny/public_html/programs/ViennaRNA/H/stringdist.h File Reference</title>
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+<body>
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+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr style="height: 56px;">
+  <td style="padding-left: 0.5em;">
+   <div id="projectname">RNAlib-2.1.2
+   </div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.8.1.1 -->
+  <div id="navrow1" class="tabs">
+    <ul class="tablist">
+      <li><a href="index.html"><span>Main&#160;Page</span></a></li>
+      <li><a href="pages.html"><span>Related&#160;Pages</span></a></li>
+      <li><a href="modules.html"><span>Modules</span></a></li>
+      <li><a href="annotated.html"><span>Data&#160;Structures</span></a></li>
+      <li class="current"><a href="files.html"><span>Files</span></a></li>
+    </ul>
+  </div>
+  <div id="navrow2" class="tabs2">
+    <ul class="tablist">
+      <li><a href="files.html"><span>File&#160;List</span></a></li>
+      <li><a href="globals.html"><span>Globals</span></a></li>
+    </ul>
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+$(document).ready(function(){initNavTree('stringdist_8h.html','');});
+</script>
+<div id="doc-content">
+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle">
+<div class="title">stringdist.h File Reference</div>  </div>
+</div><!--header-->
+<div class="contents">
+
+<p>Functions for String Alignment.  
+<a href="#details">More...</a></p>
+<div class="textblock"><div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
+  <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Include dependency graph for stringdist.h:</div>
+<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
+</div>
+<div id="dynsection-0-content" class="dyncontent" style="display:none;">
+<div class="center"><img src="stringdist_8h__incl.png" border="0" usemap="#_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2stringdist_8h" alt=""/></div>
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+</div>
+</div>
+<p><a href="stringdist_8h_source.html">Go to the source code of this file.</a></p>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2><a name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a3125991b3a403b3f89230474deb3f22e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structswString.html">swString</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="stringdist_8h.html#a3125991b3a403b3f89230474deb3f22e">Make_swString</a> (char *string)</td></tr>
+<tr class="memdesc:a3125991b3a403b3f89230474deb3f22e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Convert a structure into a format suitable for <a class="el" href="stringdist_8h.html#a89e3c335ef17780576d7c0e713830db9" title="Calculate the string edit distance of T1 and T2.">string_edit_distance()</a>.  <a href="#a3125991b3a403b3f89230474deb3f22e"></a><br/></td></tr>
+<tr class="memitem:a89e3c335ef17780576d7c0e713830db9"><td class="memItemLeft" align="right" valign="top">float&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="stringdist_8h.html#a89e3c335ef17780576d7c0e713830db9">string_edit_distance</a> (<a class="el" href="structswString.html">swString</a> *T1, <a class="el" href="structswString.html">swString</a> *T2)</td></tr>
+<tr class="memdesc:a89e3c335ef17780576d7c0e713830db9"><td class="mdescLeft">&#160;</td><td class="mdescRight">Calculate the string edit distance of T1 and T2.  <a href="#a89e3c335ef17780576d7c0e713830db9"></a><br/></td></tr>
+</table>
+<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
+<div class="textblock"><p>Functions for String Alignment. </p>
+</div><hr/><h2>Function Documentation</h2>
+<a class="anchor" id="a3125991b3a403b3f89230474deb3f22e"></a>
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"><a class="el" href="structswString.html">swString</a>* Make_swString </td>
+          <td>(</td>
+          <td class="paramtype">char *&#160;</td>
+          <td class="paramname"><em>string</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Convert a structure into a format suitable for <a class="el" href="stringdist_8h.html#a89e3c335ef17780576d7c0e713830db9" title="Calculate the string edit distance of T1 and T2.">string_edit_distance()</a>. </p>
+<dl class="params"><dt>Parameters:</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">string</td><td></td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns:</dt><dd></dd></dl>
+
+</div>
+</div>
+<a class="anchor" id="a89e3c335ef17780576d7c0e713830db9"></a>
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">float string_edit_distance </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="structswString.html">swString</a> *&#160;</td>
+          <td class="paramname"><em>T1</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="structswString.html">swString</a> *&#160;</td>
+          <td class="paramname"><em>T2</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Calculate the string edit distance of T1 and T2. </p>
+<dl class="params"><dt>Parameters:</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">T1</td><td></td></tr>
+    <tr><td class="paramname">T2</td><td></td></tr>
+  </table>
+  </dd>
+</dl>
+<dl class="section return"><dt>Returns:</dt><dd></dd></dl>
+
+</div>
+</div>
+</div><!-- contents -->
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+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
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