WSTester updated to work plus hopefully all the other changes that need to go into...

[jabaws.git] / binaries / src / ViennaRNA / doc / html / utils_8h.js

diff --git a/binaries/src/ViennaRNA/doc/html/utils_8h.js b/binaries/src/ViennaRNA/doc/html/utils_8h.js
new file mode 100644 (file)
index 0000000..8fc09df
--- /dev/null
+++ b/binaries/src/ViennaRNA/doc/html/utils_8h.js
@@ -0,0 +1,74 @@
+var utils_8h =
+[
+    [ "VRNA_INPUT_ERROR", "utils_8h.html#ad403c9ea58f1836689404c2931419c8c", null ],
+    [ "VRNA_INPUT_QUIT", "utils_8h.html#a72f3c6ca5c83d2b9baed2922d19c403d", null ],
+    [ "VRNA_INPUT_MISC", "utils_8h.html#a8e3241b321c9c1a78a69e59e2e019a71", null ],
+    [ "VRNA_INPUT_FASTA_HEADER", "utils_8h.html#a2f0d8069e93d3ac54d9320d6bdb8e7e7", null ],
+    [ "VRNA_INPUT_SEQUENCE", "utils_8h.html#a8566d6787972100e68b5a2a159b4cf45", null ],
+    [ "VRNA_INPUT_CONSTRAINT", "utils_8h.html#ac08a9df45b9721b97a47dbfe7a6e5f85", null ],
+    [ "VRNA_INPUT_NO_TRUNCATION", "utils_8h.html#a086742158293217a46ae2f71bb296937", null ],
+    [ "VRNA_INPUT_NO_REST", "utils_8h.html#a7a2e8c50a0c7ce82e60da1016e1367fd", null ],
+    [ "VRNA_INPUT_NO_SPAN", "utils_8h.html#a0de536599b881c787b0943a2671da476", null ],
+    [ "VRNA_INPUT_NOSKIP_BLANK_LINES", "utils_8h.html#ab4db885222b3b69608310d7c7e63e286", null ],
+    [ "VRNA_INPUT_BLANK_LINE", "utils_8h.html#a305474b93ccb79ae4c7754016a8ddd84", null ],
+    [ "VRNA_INPUT_NOSKIP_COMMENTS", "utils_8h.html#a0f6311f11bed1842e3a527ab27b294c6", null ],
+    [ "VRNA_INPUT_COMMENT", "utils_8h.html#af2062e0eeefffd3ed639af460b3d4fab", null ],
+    [ "VRNA_CONSTRAINT_PIPE", "utils_8h.html#a4e8d7120619b21df0309af425acbc9a2", null ],
+    [ "VRNA_CONSTRAINT_DOT", "utils_8h.html#a55e1d16fd693ae9ec8e987b0750da804", null ],
+    [ "VRNA_CONSTRAINT_X", "utils_8h.html#a077c56550c915d4516d84a5ed8d051f4", null ],
+    [ "VRNA_CONSTRAINT_ANG_BRACK", "utils_8h.html#a0512d790f738742cbdcf3f7c87b46f48", null ],
+    [ "VRNA_CONSTRAINT_RND_BRACK", "utils_8h.html#aa20bfca4bb2903c8548000a33d7bbb53", null ],
+    [ "VRNA_CONSTRAINT_MULTILINE", "utils_8h.html#a7d725ef525b29891abef3f1ed42599a4", null ],
+    [ "VRNA_CONSTRAINT_NO_HEADER", "utils_8h.html#a08d12a9a846ea593b7171d277c9f033f", null ],
+    [ "VRNA_CONSTRAINT_ALL", "utils_8h.html#a0a697f77a6fbb10f34e16fa68ed9e655", null ],
+    [ "VRNA_CONSTRAINT_G", "utils_8h.html#a99dc6b23dc4080a76e2ed1a81c20e94d", null ],
+    [ "VRNA_OPTION_MULTILINE", "utils_8h.html#abec89c09874528c6cb73140a4c3d86d7", null ],
+    [ "MIN2", "utils_8h.html#ae0b9cd0ce090bd69b951aa73e8fa4f7d", null ],
+    [ "MAX2", "utils_8h.html#a33297b3679c713b0c4d897cd0fe3b122", null ],
+    [ "MIN3", "utils_8h.html#a721b8d5f3abef17f10293f1f7f8c958e", null ],
+    [ "MAX3", "utils_8h.html#a8d577123d2e66d2b7d0bf9af6e172b93", null ],
+    [ "XSTR", "utils_8h.html#a03943706e48069237cd57f2d35ca987e", null ],
+    [ "STR", "utils_8h.html#a6388870e639eee9c0a69446876f1f8cc", null ],
+    [ "FILENAME_MAX_LENGTH", "utils_8h.html#afb228174279df9486a5cb56ac0bc79a3", null ],
+    [ "FILENAME_ID_LENGTH", "utils_8h.html#a33c3b1826b8e2739f09f111ec719ded5", null ],
+    [ "space", "utils_8h.html#ad7e1e137b3bf1f7108933d302a7f0177", null ],
+    [ "xrealloc", "utils_8h.html#a9037ada838835b1b9db41581a021b0c8", null ],
+    [ "nrerror", "utils_8h.html#a127ce946e56b5a5773781cabe68e38c5", null ],
+    [ "warn_user", "utils_8h.html#af2355fa8746f2f30fbe71db65dea3d51", null ],
+    [ "init_rand", "utils_8h.html#a8aaa6d9be6f803f496d9b97375c371f3", null ],
+    [ "urn", "utils_8h.html#aaa328491c84996e445d027fde9800f2e", null ],
+    [ "int_urn", "utils_8h.html#a68ff0849d44f62fe491800378a5ffcb4", null ],
+    [ "filecopy", "utils_8h.html#ab213334ce977b6d21611cdea6b80c3bf", null ],
+    [ "time_stamp", "utils_8h.html#a7afeb906cb36e9d77379eabc6907ac46", null ],
+    [ "random_string", "utils_8h.html#a1b95eac365a021572e1c37e5993a89be", null ],
+    [ "hamming", "utils_8h.html#ad9dc7bfc9aa664dc6698f17ce07fc7e7", null ],
+    [ "hamming_bound", "utils_8h.html#a96d3c36717d624514055ce201cab1542", null ],
+    [ "get_line", "utils_8h.html#abe51806d14cff0789a8c1df7dbc45b71", null ],
+    [ "skip_comment_lines", "utils_8h.html#ac1cd06b8e0cc1dc571c3652bb83b60f1", null ],
+    [ "get_input_line", "utils_8h.html#a8ef1835eb83f542396f59f0b205965e5", null ],
+    [ "get_multi_input_line", "utils_8h.html#a61b9a7a4716c98a315ee9da411515f9c", null ],
+    [ "read_record", "utils_8h.html#afd194a69af9d92b5b0412a7627ac1595", null ],
+    [ "extract_record_rest_structure", "utils_8h.html#a39af7b684657ed0efa467ef9865777b3", null ],
+    [ "pack_structure", "utils_8h.html#ac6dfa5e22928c087c6e09ff0054a7ced", null ],
+    [ "unpack_structure", "utils_8h.html#a071c6921efe1eb974f115ee6fefa3c39", null ],
+    [ "make_pair_table", "utils_8h.html#a89c32307ee50a0026f4a3131fac0845a", null ],
+    [ "make_pair_table_pk", "utils_8h.html#ade238ede0090a5ca07f9b4dc0eea8a42", null ],
+    [ "copy_pair_table", "utils_8h.html#afeaa6d68eef3a99d0a7aa08aa91c6601", null ],
+    [ "alimake_pair_table", "utils_8h.html#a3c81b3967056c3888b8472b65fbb16f5", null ],
+    [ "make_pair_table_snoop", "utils_8h.html#a9aa3bf3b4346bb7fb88efc154dd07a79", null ],
+    [ "make_loop_index_pt", "utils_8h.html#a4358e89f64cc87a563b7ef3855f75bed", null ],
+    [ "bp_distance", "utils_8h.html#a6ebbcd29a754f0e4f1a66d1fd84184db", null ],
+    [ "print_tty_input_seq", "utils_8h.html#a6bf778117d31b7fd90db435323f4ef74", null ],
+    [ "print_tty_input_seq_str", "utils_8h.html#ae4ef89b662a3e9b5b5f0781d9757aba0", null ],
+    [ "print_tty_constraint_full", "utils_8h.html#ae8ae8a34962b9959be3f6c40f0a80ac1", null ],
+    [ "print_tty_constraint", "utils_8h.html#a4d167deb70bb51723e44374dc981deb2", null ],
+    [ "str_DNA2RNA", "utils_8h.html#ad3f18dd83f958f18b2f26ecb99305208", null ],
+    [ "str_uppercase", "utils_8h.html#a17b796b806f96b70382077fb5bc519bb", null ],
+    [ "get_iindx", "utils_8h.html#a55c0f6b3b07b6adf2ee235ba901fe397", null ],
+    [ "get_indx", "utils_8h.html#a4d9ee1572c1bfcd02d3d3f2db8a6530f", null ],
+    [ "getConstraint", "utils_8h.html#a75347bed52f681908ed7c378abc207b7", null ],
+    [ "constrain_ptypes", "utils_8h.html#a36c3a6c3218b041f992052767bc74549", null ],
+    [ "make_referenceBP_array", "utils_8h.html#a578cd9712dee812fb1c58aa3cc489864", null ],
+    [ "compute_BPdifferences", "utils_8h.html#add463184355d0803b6ee6e09f29182f2", null ],
+    [ "xsubi", "utils_8h.html#af9a866c8417afda7368bbac939ab3c47", null ]
+];
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