WSTester updated to work plus hopefully all the other changes that need to go into...

[jabaws.git] / binaries / src / ViennaRNA / lib / dist_vars.c

diff --git a/binaries/src/ViennaRNA/lib/dist_vars.c b/binaries/src/ViennaRNA/lib/dist_vars.c
new file mode 100644 (file)
index 0000000..cac12c1
--- /dev/null
+++ b/binaries/src/ViennaRNA/lib/dist_vars.c
@@ -0,0 +1,9 @@
+/* Last changed Time-stamp: <> */
+/*             Global variables for Distance-Package */
+
+int  edit_backtrack = 0;  /* calculate aligned representation */
+
+char *aligned_line[4];    /* containes the aligned string representations */
+
+int  cost_matrix = 0;     /* 0 for usual costs, 1 for Shapiro's costs */
+