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+ sed -e "s|^$$srcdirstrip/||;t" \
+ -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+ case $$dist_files in \
+ */*) $(MKDIR_P) `echo "$$dist_files" | \
+ sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+ sort -u` ;; \
+ esac; \
+ for file in $$dist_files; do \
+ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
+ if test -d $$d/$$file; then \
+ dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+ if test -d "$(distdir)/$$file"; then \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
+ if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+ cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
+ cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
+ else \
+ test -f "$(distdir)/$$file" \
+ || cp -p $$d/$$file "$(distdir)/$$file" \
+ || exit 1; \
+ fi; \
+ done
+ $(MAKE) $(AM_MAKEFLAGS) \
+ top_distdir="$(top_distdir)" distdir="$(distdir)" \
+ dist-info
+check-am: all-am
+check: check-am
+all-am: Makefile $(INFO_DEPS) $(MANS)
+installdirs:
+ for dir in "$(DESTDIR)$(infodir)" "$(DESTDIR)$(man1dir)"; do \
+ test -z "$$dir" || $(MKDIR_P) "$$dir"; \
+ done
+install: install-am
+install-exec: install-exec-am
+install-data: install-data-am
+uninstall: uninstall-am
+
+install-am: all-am
+ @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
+
+installcheck: installcheck-am
+install-strip:
+ if test -z '$(STRIP)'; then \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
+mostlyclean-generic:
+
+clean-generic:
+
+distclean-generic:
+ -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+
+maintainer-clean-generic:
+ @echo "This command is intended for maintainers to use"
+ @echo "it deletes files that may require special tools to rebuild."
+clean: clean-am
+
+clean-am: clean-aminfo clean-generic mostlyclean-am
+
+distclean: distclean-am
+ -rm -f Makefile
+distclean-am: clean-am distclean-generic
+
+dvi: dvi-am
+
+dvi-am: $(DVIS)
+
+html: html-am
+
+html-am: $(HTMLS)
+
+info: info-am
+
+info-am: $(INFO_DEPS)
+
+install-data-am: install-info-am install-man
+
+install-dvi: install-dvi-am
+
+install-dvi-am: $(DVIS)
+ @$(NORMAL_INSTALL)
+ @list='$(DVIS)'; test -n "$(dvidir)" || list=; \
+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(dvidir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(dvidir)" || exit 1; \
+ fi; \
+ for p in $$list; do \
+ if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+ echo "$$d$$p"; \
+ done | $(am__base_list) | \
+ while read files; do \
+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(dvidir)'"; \
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+ done
+install-exec-am:
+
+install-html: install-html-am
+
+install-html-am: $(HTMLS)
+ @$(NORMAL_INSTALL)
+ @list='$(HTMLS)'; list2=; test -n "$(htmldir)" || list=; \
+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(htmldir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(htmldir)" || exit 1; \
+ fi; \
+ for p in $$list; do \
+ if test -f "$$p" || test -d "$$p"; then d=; else d="$(srcdir)/"; fi; \
+ $(am__strip_dir) \
+ d2=$$d$$p; \
+ if test -d "$$d2"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(htmldir)/$$f'"; \
+ $(MKDIR_P) "$(DESTDIR)$(htmldir)/$$f" || exit 1; \
+ echo " $(INSTALL_DATA) '$$d2'/* '$(DESTDIR)$(htmldir)/$$f'"; \
+ $(INSTALL_DATA) "$$d2"/* "$(DESTDIR)$(htmldir)/$$f" || exit $$?; \
+ else \
+ list2="$$list2 $$d2"; \
+ fi; \
+ done; \
+ test -z "$$list2" || { echo "$$list2" | $(am__base_list) | \
+ while read files; do \
+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(htmldir)'"; \
+ $(INSTALL_DATA) $$files "$(DESTDIR)$(htmldir)" || exit $$?; \
+ done; }
+install-info: install-info-am
+
+install-info-am: $(INFO_DEPS)
+ @$(NORMAL_INSTALL)
+ @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+ list='$(INFO_DEPS)'; test -n "$(infodir)" || list=; \
+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(infodir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(infodir)" || exit 1; \
+ fi; \
+ for file in $$list; do \
+ case $$file in \
+ $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+ esac; \
+ if test -f $$file; then d=.; else d=$(srcdir); fi; \
+ file_i=`echo "$$file" | sed 's|\.info$$||;s|$$|.i|'`; \
+ for ifile in $$d/$$file $$d/$$file-[0-9] $$d/$$file-[0-9][0-9] \
+ $$d/$$file_i[0-9] $$d/$$file_i[0-9][0-9] ; do \
+ if test -f $$ifile; then \
+ echo "$$ifile"; \
+ else : ; fi; \
+ done; \
+ done | $(am__base_list) | \
+ while read files; do \
+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(infodir)'"; \
+ $(INSTALL_DATA) $$files "$(DESTDIR)$(infodir)" || exit $$?; done
+ @$(POST_INSTALL)
+ @if $(am__can_run_installinfo); then \
+ list='$(INFO_DEPS)'; test -n "$(infodir)" || list=; \
+ for file in $$list; do \
+ relfile=`echo "$$file" | sed 's|^.*/||'`; \
+ echo " install-info --info-dir='$(DESTDIR)$(infodir)' '$(DESTDIR)$(infodir)/$$relfile'";\
+ install-info --info-dir="$(DESTDIR)$(infodir)" "$(DESTDIR)$(infodir)/$$relfile" || :;\
+ done; \
+ else : ; fi
+install-man: install-man1
+
+install-pdf: install-pdf-am
+
+install-pdf-am: $(PDFS)
+ @$(NORMAL_INSTALL)
+ @list='$(PDFS)'; test -n "$(pdfdir)" || list=; \
+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(pdfdir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(pdfdir)" || exit 1; \
+ fi; \
+ for p in $$list; do \
+ if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+ echo "$$d$$p"; \
+ done | $(am__base_list) | \
+ while read files; do \
+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(pdfdir)'"; \
+ $(INSTALL_DATA) $$files "$(DESTDIR)$(pdfdir)" || exit $$?; done
+install-ps: install-ps-am
+
+install-ps-am: $(PSS)
+ @$(NORMAL_INSTALL)
+ @list='$(PSS)'; test -n "$(psdir)" || list=; \
+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(psdir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(psdir)" || exit 1; \
+ fi; \
+ for p in $$list; do \
+ if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+ echo "$$d$$p"; \
+ done | $(am__base_list) | \
+ while read files; do \
+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(psdir)'"; \
+ $(INSTALL_DATA) $$files "$(DESTDIR)$(psdir)" || exit $$?; done
+installcheck-am:
+
+maintainer-clean: maintainer-clean-am
+ -rm -f Makefile
+maintainer-clean-am: distclean-am maintainer-clean-aminfo \
+ maintainer-clean-generic maintainer-clean-local
+
+mostlyclean: mostlyclean-am
+
+mostlyclean-am: mostlyclean-aminfo mostlyclean-generic
+
+pdf: pdf-am
+
+pdf-am: $(PDFS)
+
+ps: ps-am
+
+ps-am: $(PSS)
+
+uninstall-am: uninstall-dvi-am uninstall-html-am uninstall-info-am \
+ uninstall-man uninstall-pdf-am uninstall-ps-am
+
+uninstall-man: uninstall-man1
+
+.MAKE: install-am install-strip
+
+.PHONY: all all-am check check-am clean clean-aminfo clean-generic \
+ dist-info distclean distclean-generic distdir dvi dvi-am html \
+ html-am info info-am install install-am install-data \
+ install-data-am install-dvi install-dvi-am install-exec \
+ install-exec-am install-html install-html-am install-info \
+ install-info-am install-man install-man1 install-pdf \
+ install-pdf-am install-ps install-ps-am install-strip \
+ installcheck installcheck-am installdirs maintainer-clean \
+ maintainer-clean-aminfo maintainer-clean-generic \
+ maintainer-clean-local mostlyclean mostlyclean-aminfo \
+ mostlyclean-generic pdf pdf-am ps ps-am uninstall uninstall-am \
+ uninstall-dvi-am uninstall-html-am uninstall-info-am \
+ uninstall-man uninstall-man1 uninstall-pdf-am uninstall-ps-am
+
+
+# remove all generated man pages
+maintainer-clean-local:
+ -rm -f $(dist_man_MANS)
+
+RNA2Dfold.1: ../Progs/RNA2Dfold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNA2Dfold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNA2Dfold.ggo" > RNA2Dfold.1
+
+RNAaliduplex.1: ../Progs/RNAaliduplex.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAaliduplex.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAaliduplex.ggo" > RNAaliduplex.1
+
+RNAalifold.1: ../Progs/RNAalifold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAalifold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAalifold.ggo" > RNAalifold.1
+
+RNAcofold.1: ../Progs/RNAcofold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAcofold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAcofold.ggo" > RNAcofold.1
+
+RNAduplex.1: ../Progs/RNAduplex.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAduplex.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAduplex.ggo" > RNAduplex.1
+
+RNAeval.1: ../Progs/RNAeval.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAeval.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAeval.ggo" > RNAeval.1
+
+RNAfold.1: ../Progs/RNAfold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAfold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAfold.ggo" > RNAfold.1
+
+RNAheat.1: ../Progs/RNAheat.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAheat.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAheat.ggo" > RNAheat.1
+
+RNAinverse.1: ../Progs/RNAinverse.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAinverse.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAinverse.ggo" > RNAinverse.1
+
+RNALalifold.1: ../Progs/RNALalifold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAalifold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNALalifold.ggo" > RNALalifold.1
+
+RNALfold.1: ../Progs/RNALfold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNALfold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNALfold.ggo" > RNALfold.1
+
+RNApaln.1: ../Progs/RNApaln.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNApaln.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNApaln.ggo" > RNApaln.1
+
+RNAparconv.1: ../Progs/RNAparconv.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAparconv.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAparconv.ggo" > RNAparconv.1
+
+RNAplfold.1: ../Progs/RNAplfold.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAplfold.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAplfold.ggo" > RNAplfold.1
+
+RNAplot.1: ../Progs/RNAplot.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAplot.inc\
+ "./cmdlopt.sh ../Progs/RNAplot.ggo" > RNAplot.1
+
+RNAsubopt.1: ../Progs/RNAsubopt.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAsubopt.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAsubopt.ggo" > RNAsubopt.1
+
+RNAup.1: ../Progs/RNAup.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAup.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAup.ggo" > RNAup.1
+
+RNAplex.1: ../Progs/RNAplex.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAplex.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAplex.ggo" > RNAplex.1
+
+RNAPKplex.1: ../Progs/RNAPKplex.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAPKplex.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAPKplex.ggo" > RNAPKplex.1
+
+RNAsnoop.1: ../Progs/RNAsnoop.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAsnoop.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNAsnoop.ggo" > RNAsnoop.1
+
+RNAdistance.1: ../Progs/RNAdistance.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNAdistance.inc\
+ "./cmdlopt.sh ../Progs/RNAdistance.ggo" > RNAdistance.1
+
+RNApdist.1: ../Progs/RNApdist.ggo
+ ./help2man -N --help-option=--detailed-help\
+ --opt-include=./include/ref_package.inc\
+ --opt-include=./include/RNApdist.inc\
+ --opt-include=./include/ref_energy_par.inc\
+ "./cmdlopt.sh ../Progs/RNApdist.ggo" > RNApdist.1
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:
git://source.jalview.org / jabaws.git / blobdiff