Wrapper for Clustal Omega.

[jabaws.git] / binaries / windows / clustalo / ChangeLog.txt

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+2010-06-17 Release 0.0.1 (Dubliniensis)\r
+               \r
+               First "release" as program has been able for a while to perform\r
+               all basic tasks without problems.\r
+\r
+               Non-standard features already built-in include:\r
+               HMM-iteration (using HMMER for building an HMM) and guide-tree\r
+               iteration. On top of that HMM input works fine and\r
+               background-frequencies are added to the HHalign process.\r
+               \r
+               Known issues: RNA/DNA alignment is considered buggy. Aligned\r
+               sequences have to be dealigned for HHalign to work properly.\r
+               \r
+               The HMMER version message can be ignored if no HMM-iteration\r
+               was used.\r