JWS-112 Hotfix the last t-coffee version 11. The -mode quickaln preset breaks if...

[jabaws.git] / conf / Executable.properties.dundee

diff --git a/conf/Executable.properties.dundee b/conf/Executable.properties.dundee
index d11fdc3..ee909fc 100644 (file)
--- a/conf/Executable.properties.dundee
+++ b/conf/Executable.properties.dundee
@@ -119,8 +119,8 @@ mafft.cluster.settings  = -P webservices -R y -q 64bit-pri.q -q c6100.q -l h_cpu
 ###########################################################################################
 #                                  TCOFFEE CONFIGURATION                                  #
 ###########################################################################################
-local.tcoffee.bin         = binaries/src/tcoffee/t_coffee_source/t_coffee
-cluster.tcoffee.bin       = /homes/www-jws2/servers/tomcat-8.5.11_jaba-2.2/webapps/jabaws/binaries/src/tcoffee/t_coffee_source/t_coffee
+local.tcoffee.bin         = binaries/src/tcoffee/t_coffee_source/t_coffee.sh
+cluster.tcoffee.bin       = /homes/www-jws2/servers/tomcat-8.5.11_jaba-2.2/webapps/jabaws/binaries/src/tcoffee/t_coffee_source/t_coffee.sh
 # This variable is required by tcoffee
 tcoffee.bin.env           = HOME_4_TCOFFEE#jobsout;
 tcoffee.presets.file      = conf/settings/TcoffeePresets.xml
@@ -198,7 +198,7 @@ iupred.cluster.settings  = -P webservices -R y -q 64bit-pri.q -q c6100.q -l h_cp
 local.aacon.bin          = /homes/www-jws2/java/jdk/bin/java
 cluster.aacon.bin        = /homes/www-jws2/java/jdk/bin/java
 ### Path to the AACon library
-aacon.jar.file           = binaries/windows/aaconservation.jar
+aacon.jar.file           = binaries/windows/compbio-conservation-1.1.jar
 aacon.parameters.file    = conf/settings/AAConParameters.xml
 aacon.presets.file       = conf/settings/AAConPresets.xml
 aacon.limits.file        = conf/settings/AAConLimits.xml