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Merge branch 'releases/Release_2_11_4_Branch'
[jalview.git]
/
src
/
jalview
/
io
/ JPredFile.java
2023-11-03
James Procter
JAL-4090 JAL-1551 spotlessApply
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commitdiff
2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
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commitdiff
2021-09-21
Ben Soares
JAL-3691 automatic insertion of Locale.ROOT to toUpperC...
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commitdiff
2020-08-10
Jim Procter
JAL-3691 toUpperCase(Locale.ROOT) for all standard...
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commitdiff
2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
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commitdiff
2019-04-04
gmungoc
JAL-3220 j2sIgnore on 3 more main methods
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commitdiff
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
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commitdiff
2018-06-28
hansonr
JAL-3032 DND enabled; additional io changes for File...
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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commitdiff
2016-07-18
gmungoc
fileFormat enum wip changes
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commitdiff
2016-07-11
gmungoc
file format enum wip changes
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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commitdiff
2014-09-23
darolmar
JAL-1355
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commitdiff
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
2014-06-05
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch
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commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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commitdiff
2014-02-18
Jim Procter
Merge branch 'JAL-1445' into develop
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
2013-02-13
jprocter
fix merge conflicts for finess on JAL-1140 (introduced...
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commitdiff
2012-12-07
jprocter
proxy commit for Anne Menard <menard.annec@gmail.com...
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commitdiff
2012-12-04
jprocter
JAL-1140 - IO classes should only raise generic IOExcep...
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2012-11-15
jprocter
Merge branch 'develop' into menard
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2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
2012-08-14
Anne Menard
last version stay many bugs ..
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2012-07-10
Anne Menard
v2
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2012-07-05
Anne Menard
Add support RNAML format
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commitdiff
2011-10-10
jprocter
update author list in license for (JAL-826)
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commitdiff
2011-09-27
jprocter
apply version 2.7 copyright
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commitdiff
2010-09-23
jprocter
apply jalview code style
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2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
2010-04-30
jprocter
jalview 2.5 release banner
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commitdiff
2009-06-08
jprocter
apply gpl development license
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commitdiff
2008-09-16
jprocter
java 1.1 compatibility
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commitdiff
2008-09-16
jprocter
fix exception raised when JNet concise files with no...
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2008-09-04
jprocter
merge from 2_4_Release branch
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commitdiff
2008-01-29
jprocter
FileParse object can be re-used to read different files...
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commitdiff
2007-12-13
jprocter
java 1.1 compatibility (again)
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2007-12-13
jprocter
java 1.1 compatibility (again)
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commitdiff
2007-10-31
jprocter
concise files can now be read as a normal alignment...
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2007-10-24
jprocter
javadoc
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2007-05-10
jprocter
apparent bug in JpredFile parser where annotation was...
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2007-02-07
amwaterhouse
Formatting
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commitdiff
2007-01-30
amwaterhouse
Any character non aa or nucleotide is a space
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2006-12-21
amwaterhouse
remove unnecessary import
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2006-08-21
amwaterhouse
header updated
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2006-07-27
amwaterhouse
remove unnecessary constructor
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commitdiff
2006-07-07
amwaterhouse
Make 1.1 compatible
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2006-05-17
jprocter
added unofficial support for concise output parsing...
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2006-02-08
amwaterhouse
Report invalid chars
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2005-09-30
amwaterhouse
Remove redundancy in Eclipse
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2005-08-22
jprocter
fixed hanging on job finished bug.
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-05-25
jprocter
tidied up system.out messages and moved many to stderr.
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commitdiff
2005-05-23
jprocter
bug fix for wierdness retrieving QUERY sequence index.
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2005-05-03
jprocter
Better treatment of error states and cancellability...
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2005-04-06
jprocter
next version of Jpred functionality using new client...
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2005-04-01
amwaterhouse
ignore jnetconf
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2005-03-31
jprocter
doh - stupid jim.
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2005-02-28
jprocter
partial implementation of JNet server prediction.
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2005-02-23
jprocter
basic jpred concise prediction reader.
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