binaries/src/ViennaRNA/doc/latex/inverse_8h.tex

   1 \hypertarget{inverse_8h}{\section{/home/asherstnev/\-Projects/\-Java.projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/inverse.h File Reference}
   2 \label{inverse_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/inverse.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/inverse.\-h}}
   3 }
   4
   5
   6 Inverse folding routines.
   7
   8
   9 \subsection*{Functions}
  10 \begin{DoxyCompactItemize}
  11 \item
  12 float \hyperlink{group__inverse__fold_ga7af026de55d4babad879f2c92559cbbc}{inverse\-\_\-fold} (char $\ast$start, const char $\ast$target)
  13 \begin{DoxyCompactList}\small\item\em Find sequences with predefined structure. \end{DoxyCompactList}\item
  14 float \hyperlink{group__inverse__fold_gaeef52ecbf2a2450ad585a344f9826806}{inverse\-\_\-pf\-\_\-fold} (char $\ast$start, const char $\ast$target)
  15 \begin{DoxyCompactList}\small\item\em Find sequence that maximizes probability of a predefined structure. \end{DoxyCompactList}\end{DoxyCompactItemize}
  16 \subsection*{Variables}
  17 \begin{DoxyCompactItemize}
  18 \item
  19 \hypertarget{group__inverse__fold_ga8f791e7740a5a28b9f6fafb4e60301d9}{char $\ast$ \hyperlink{group__inverse__fold_ga8f791e7740a5a28b9f6fafb4e60301d9}{symbolset}}\label{group__inverse__fold_ga8f791e7740a5a28b9f6fafb4e60301d9}
  20
  21 \begin{DoxyCompactList}\small\item\em This global variable points to the allowed bases, initially \char`\"{}\-A\-U\-G\-C\char`\"{}. It can be used to design sequences from reduced alphabets. \end{DoxyCompactList}\item
  22 float \hyperlink{group__inverse__fold_ga7f17d3b169af048d32bb185039a9c09c}{final\-\_\-cost}
  23 \item
  24 int \hyperlink{group__inverse__fold_ga7ec4ba51f86e1717a1e174264e4a75ce}{give\-\_\-up}
  25 \item
  26 int \hyperlink{group__inverse__fold_gafcfc65fba01b9cca5946726ed9057a63}{inv\-\_\-verbose}
  27 \end{DoxyCompactItemize}
  28
  29
  30 \subsection{Detailed Description}
  31 Inverse folding routines.