docker/Dockerfile

   1 ### JABAWS 2.2 ###
   2
   3 FROM tomcat:8.5
   4
   5 RUN apt-get update; apt-get -y install g++ && apt-get -y install make && \
   6   apt-get -y install libargtable2-dev && apt-get -y install gfortran
   7
   8 RUN wget --no-check-certificate https://www.python.org/ftp/python/2.7.13/Python-2.7.13.tgz && \
   9   tar -xzf Python-2.7.13.tgz && cd Python-2.7.13 && ./configure && make && make install
  10
  11 ENV WAR http://www.compbio.dundee.ac.uk/jabaws22/archive/jabaws.war
  12 RUN wget $WAR -O ./jabaws.war
  13 RUN mkdir -p $CATALINA_HOME/webapps/jabaws
  14 RUN unzip ./jabaws.war -d $CATALINA_HOME/webapps/jabaws
  15
  16 ENV EXEC http://www.compbio.dundee.ac.uk/jabaws22/archive/docker/Executable.properties
  17 RUN wget $EXEC -O ./Executable.properties
  18 RUN mv ./Executable.properties $CATALINA_HOME/webapps/jabaws/conf/
  19
  20 RUN mkdir -p $CATALINA_HOME/webapps/jabaws/jobsout
  21
  22 WORKDIR $CATALINA_HOME/webapps/jabaws/binaries/src/
  23
  24 # compile the binaries
  25 #RUN chmod +x ./compilebin.sh && ./compilebin.sh
  26 RUN chmod +x ./setexecflag.sh && ./setexecflag.sh
  27
  28 WORKDIR $CATALINA_HOME
  29
  30 EXPOSE 8080
  31 CMD ["catalina.sh", "run"]