testsrc/compbio/stat/collector/TestInputFilter.java

   1 package compbio.stat.collector;\r
   2 \r
   3 import java.io.File;\r
   4 import java.io.IOException;\r
   5 \r
   6 import org.testng.Assert;\r
   7 import org.testng.annotations.Test;\r
   8 \r
   9 import compbio.metadata.AllTestSuit;\r
  10 \r
  11 public class TestInputFilter {\r
  12 \r
  13         final static String FASTA_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
  14                         + "TO1381.fasta";\r
  15         final static String ALN_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
  16                         + "TO1381L.aln";\r
  17         final static String TEST_FASTA_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
  18                         + "test_input.fasta";\r
  19         final static String TEST_ALIGNMENT_INPUT = AllTestSuit.TEST_DATA_PATH_ABSOLUTE\r
  20                         + "test_input.aln";\r
  21         @Test\r
  22         public void TestInputFilter() {\r
  23                 InputFilter ifilter = new InputFilter();\r
  24                 try {\r
  25                         // Makes sure real files are accepted\r
  26                         Assert.assertTrue(ifilter.accept(new File(FASTA_INPUT)));\r
  27                         Assert.assertTrue(ifilter.accept(new File(ALN_INPUT)));\r
  28 \r
  29                         // .. and test files are not\r
  30                         Assert.assertFalse(ifilter.accept(new File(TEST_ALIGNMENT_INPUT)));\r
  31                         Assert.assertFalse(ifilter.accept(new File(TEST_FASTA_INPUT)));\r
  32                         // does not matter if the file is empty, it is still not a test\r
  33                         // file!\r
  34                         Assert.assertTrue(ifilter.accept(File.createTempFile("aaa", "bbb")));\r
  35                 } catch (IOException e) {\r
  36                         e.printStackTrace();\r
  37                         Assert.fail(e.getMessage());\r
  38                 }\r
  39         }\r
  40 }\r