webservices/compbio/ws/server/IUPredWS.java

   1 package compbio.ws.server;\r
   2 \r
   3 import java.util.List;\r
   4 \r
   5 import javax.jws.WebService;\r
   6 \r
   7 import org.apache.log4j.Logger;\r
   8 \r
   9 import compbio.data.msa.SequenceAnnotation;\r
  10 import compbio.data.sequence.FastaSequence;\r
  11 import compbio.metadata.JobSubmissionException;\r
  12 import compbio.metadata.LimitExceededException;\r
  13 import compbio.metadata.Preset;\r
  14 import compbio.metadata.UnsupportedRuntimeException;\r
  15 import compbio.metadata.WrongParameterException;\r
  16 import compbio.runner.disorder.IUPred;\r
  17 \r
  18 @WebService(endpointInterface = "compbio.data.msa.SequenceAnnotation", targetNamespace = "http://msa.data.compbio/01/12/2010/", serviceName = "IUPredWS")\r
  19 public class IUPredWS extends SAService<IUPred>\r
  20                 implements\r
  21                         SequenceAnnotation<IUPred> {\r
  22 \r
  23         private static Logger log = Logger.getLogger(IUPredWS.class);\r
  24 \r
  25         public IUPredWS() {\r
  26                 super(new IUPred(), log);\r
  27         }\r
  28 \r
  29         /*\r
  30          * No presets are supported, thus the result of this call will be as simple\r
  31          * call to analize without parameters\r
  32          */\r
  33         @Override\r
  34         public String presetAnalize(List<FastaSequence> sequences,\r
  35                         Preset<IUPred> preset) throws UnsupportedRuntimeException,\r
  36                         LimitExceededException, JobSubmissionException,\r
  37                         WrongParameterException {\r
  38 \r
  39                 return analize(sequences);\r
  40         }\r
  41 \r
  42 }\r