webservices/compbio/ws/server/resource/ClustalWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/01/2010/" xmlns:tns="http://msa.data.compbio/01/01/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="align" type="tns:align"/>
  15
  16   <xs:element name="alignResponse" type="tns:alignResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAlign" type="tns:customAlign"/>
  23
  24   <xs:element name="customAlignResponse" type="tns:customAlignResponse"/>
  25
  26   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  27
  28   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  29
  30   <xs:element name="getLimit" type="tns:getLimit"/>
  31
  32   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  33
  34   <xs:element name="getLimits" type="tns:getLimits"/>
  35
  36   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  37
  38   <xs:element name="getPresets" type="tns:getPresets"/>
  39
  40   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  41
  42   <xs:element name="getResult" type="tns:getResult"/>
  43
  44   <xs:element name="getResultResponse" type="tns:getResultResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="presetAlign" type="tns:presetAlign"/>
  51
  52   <xs:element name="presetAlignResponse" type="tns:presetAlignResponse"/>
  53
  54   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  55
  56   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  57
  58   <xs:complexType name="getJobStatus">
  59     <xs:sequence>
  60       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
  61     </xs:sequence>
  62   </xs:complexType>
  63
  64   <xs:complexType name="getJobStatusResponse">
  65     <xs:sequence>
  66       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
  67     </xs:sequence>
  68   </xs:complexType>
  69
  70   <xs:complexType name="getRunnerOptions">
  71     <xs:sequence/>
  72   </xs:complexType>
  73
  74   <xs:complexType name="getRunnerOptionsResponse">
  75     <xs:sequence>
  76       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
  77     </xs:sequence>
  78   </xs:complexType>
  79
  80   <xs:complexType name="runnerConfig">
  81     <xs:sequence>
  82       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  83       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  84       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
  85       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
  86     </xs:sequence>
  87   </xs:complexType>
  88
  89   <xs:complexType name="option">
  90     <xs:sequence>
  91       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
  92       <xs:element name="description" type="xs:string" minOccurs="0"/>
  93       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
  94       <xs:element name="name" type="xs:string" minOccurs="0"/>
  95       <xs:element name="required" type="xs:boolean"/>
  96     </xs:sequence>
  97   </xs:complexType>
  98
  99   <xs:complexType name="parameter">
 100     <xs:complexContent>
 101       <xs:extension base="tns:option">
 102         <xs:sequence>
 103           <xs:element name="optionName" type="xs:string" minOccurs="0"/>
 104           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 105         </xs:sequence>
 106       </xs:extension>
 107     </xs:complexContent>
 108   </xs:complexType>
 109
 110   <xs:complexType name="valueConstrain">
 111     <xs:sequence>
 112       <xs:element name="type" type="tns:type" minOccurs="0"/>
 113     </xs:sequence>
 114   </xs:complexType>
 115
 116   <xs:complexType name="getResult">
 117     <xs:sequence>
 118       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 119     </xs:sequence>
 120   </xs:complexType>
 121
 122   <xs:complexType name="getResultResponse">
 123     <xs:sequence>
 124       <xs:element name="return" type="tns:alignment" minOccurs="0"/>
 125     </xs:sequence>
 126   </xs:complexType>
 127
 128   <xs:complexType name="alignment" final="extension restriction">
 129     <xs:sequence/>
 130   </xs:complexType>
 131
 132   <xs:complexType name="ResultNotAvailableException">
 133     <xs:sequence>
 134       <xs:element name="message" type="xs:string" minOccurs="0"/>
 135     </xs:sequence>
 136   </xs:complexType>
 137
 138   <xs:complexType name="getLimits">
 139     <xs:sequence/>
 140   </xs:complexType>
 141
 142   <xs:complexType name="getLimitsResponse">
 143     <xs:sequence>
 144       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 145     </xs:sequence>
 146   </xs:complexType>
 147
 148   <xs:complexType name="limitsManager">
 149     <xs:sequence/>
 150   </xs:complexType>
 151
 152   <xs:complexType name="getLimit">
 153     <xs:sequence>
 154       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 155     </xs:sequence>
 156   </xs:complexType>
 157
 158   <xs:complexType name="getLimitResponse">
 159     <xs:sequence>
 160       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 161     </xs:sequence>
 162   </xs:complexType>
 163
 164   <xs:complexType name="limit">
 165     <xs:sequence/>
 166   </xs:complexType>
 167
 168   <xs:complexType name="getPresets">
 169     <xs:sequence/>
 170   </xs:complexType>
 171
 172   <xs:complexType name="getPresetsResponse">
 173     <xs:sequence>
 174       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 175     </xs:sequence>
 176   </xs:complexType>
 177
 178   <xs:complexType name="presetManager">
 179     <xs:sequence>
 180       <xs:element name="presets" type="tns:preset" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 181       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 182     </xs:sequence>
 183   </xs:complexType>
 184
 185   <xs:complexType name="preset">
 186     <xs:sequence>
 187       <xs:element name="description" type="xs:string" minOccurs="0"/>
 188       <xs:element name="name" type="xs:string" minOccurs="0"/>
 189       <xs:element name="options" type="xs:string" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 190     </xs:sequence>
 191   </xs:complexType>
 192
 193   <xs:complexType name="cancelJob">
 194     <xs:sequence>
 195       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 196     </xs:sequence>
 197   </xs:complexType>
 198
 199   <xs:complexType name="cancelJobResponse">
 200     <xs:sequence>
 201       <xs:element name="return" type="xs:boolean"/>
 202     </xs:sequence>
 203   </xs:complexType>
 204
 205   <xs:complexType name="presetAlign">
 206     <xs:sequence>
 207       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 208       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
 209     </xs:sequence>
 210   </xs:complexType>
 211
 212   <xs:complexType name="fastaSequence">
 213     <xs:sequence/>
 214   </xs:complexType>
 215
 216   <xs:complexType name="presetAlignResponse">
 217     <xs:sequence>
 218       <xs:element name="return" type="xs:string" minOccurs="0"/>
 219     </xs:sequence>
 220   </xs:complexType>
 221
 222   <xs:complexType name="UnsupportedRuntimeException">
 223     <xs:sequence>
 224       <xs:element name="message" type="xs:string" minOccurs="0"/>
 225     </xs:sequence>
 226   </xs:complexType>
 227
 228   <xs:complexType name="LimitExceededException">
 229     <xs:sequence>
 230       <xs:element name="actualNumberofSequences" type="xs:int"/>
 231       <xs:element name="message" type="xs:string" minOccurs="0"/>
 232       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
 233       <xs:element name="sequenceLenghtActual" type="xs:int"/>
 234       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
 235     </xs:sequence>
 236   </xs:complexType>
 237
 238   <xs:complexType name="JobSubmissionException">
 239     <xs:sequence>
 240       <xs:element name="message" type="xs:string" minOccurs="0"/>
 241     </xs:sequence>
 242   </xs:complexType>
 243
 244   <xs:complexType name="WrongParameterException">
 245     <xs:sequence>
 246       <xs:element name="message" type="xs:string" minOccurs="0"/>
 247     </xs:sequence>
 248   </xs:complexType>
 249
 250   <xs:complexType name="pullExecStatistics">
 251     <xs:sequence>
 252       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 253       <xs:element name="position" type="xs:long"/>
 254     </xs:sequence>
 255   </xs:complexType>
 256
 257   <xs:complexType name="pullExecStatisticsResponse">
 258     <xs:sequence>
 259       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 260     </xs:sequence>
 261   </xs:complexType>
 262
 263   <xs:complexType name="chunkHolder">
 264     <xs:sequence/>
 265   </xs:complexType>
 266
 267   <xs:complexType name="align">
 268     <xs:sequence>
 269       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 270     </xs:sequence>
 271   </xs:complexType>
 272
 273   <xs:complexType name="alignResponse">
 274     <xs:sequence>
 275       <xs:element name="return" type="xs:string" minOccurs="0"/>
 276     </xs:sequence>
 277   </xs:complexType>
 278
 279   <xs:complexType name="customAlign">
 280     <xs:sequence>
 281       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 282       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 283     </xs:sequence>
 284   </xs:complexType>
 285
 286   <xs:complexType name="customAlignResponse">
 287     <xs:sequence>
 288       <xs:element name="return" type="xs:string" minOccurs="0"/>
 289     </xs:sequence>
 290   </xs:complexType>
 291
 292   <xs:simpleType name="jobStatus">
 293     <xs:restriction base="xs:string">
 294       <xs:enumeration value="PENDING"/>
 295       <xs:enumeration value="RUNNING"/>
 296       <xs:enumeration value="CANCELLED"/>
 297       <xs:enumeration value="FINISHED"/>
 298       <xs:enumeration value="FAILED"/>
 299       <xs:enumeration value="UNDEFINED"/>
 300       <xs:enumeration value="STARTED"/>
 301       <xs:enumeration value="SUBMITTED"/>
 302       <xs:enumeration value="COLLECTED"/>
 303     </xs:restriction>
 304   </xs:simpleType>
 305
 306   <xs:simpleType name="type">
 307     <xs:restriction base="xs:string">
 308       <xs:enumeration value="Integer"/>
 309       <xs:enumeration value="Float"/>
 310     </xs:restriction>
 311   </xs:simpleType>
 312 </xs:schema>
 313