webservices/compbio/ws/server/resource/GlobPlotWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/12/2010/" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="analize" type="tns:analize"/>
  15
  16   <xs:element name="analizeResponse" type="tns:analizeResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAnalize" type="tns:customAnalize"/>
  23
  24   <xs:element name="customAnalizeResponse" type="tns:customAnalizeResponse"/>
  25
  26   <xs:element name="getAnnotation" type="tns:getAnnotation"/>
  27
  28   <xs:element name="getAnnotationResponse" type="tns:getAnnotationResponse"/>
  29
  30   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  31
  32   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  33
  34   <xs:element name="getLimit" type="tns:getLimit"/>
  35
  36   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  37
  38   <xs:element name="getLimits" type="tns:getLimits"/>
  39
  40   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  41
  42   <xs:element name="getPresets" type="tns:getPresets"/>
  43
  44   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="limits" type="tns:limitsManager"/>
  51
  52   <xs:element name="presetAnalize" type="tns:presetAnalize"/>
  53
  54   <xs:element name="presetAnalizeResponse" type="tns:presetAnalizeResponse"/>
  55
  56   <xs:element name="presets" type="tns:presetManager"/>
  57
  58   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  59
  60   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  61
  62   <xs:element name="runnerConfig" type="tns:runnerConfig"/>
  63
  64   <xs:complexType name="getAnnotation">
  65     <xs:sequence>
  66       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
  67     </xs:sequence>
  68   </xs:complexType>
  69
  70   <xs:complexType name="getAnnotationResponse">
  71     <xs:sequence>
  72       <xs:element name="return" type="tns:scoreManager" minOccurs="0"/>
  73     </xs:sequence>
  74   </xs:complexType>
  75
  76   <xs:complexType name="scoreManager">
  77     <xs:sequence>
  78       <xs:element name="seqScores" type="tns:scoreHolder" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  79     </xs:sequence>
  80   </xs:complexType>
  81
  82   <xs:complexType name="scoreHolder">
  83     <xs:sequence>
  84       <xs:element name="id" type="xs:string" minOccurs="0"/>
  85       <xs:element name="scores" type="tns:score" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  86     </xs:sequence>
  87   </xs:complexType>
  88
  89   <xs:complexType name="score">
  90     <xs:sequence>
  91       <xs:element name="method" type="xs:string" minOccurs="0"/>
  92       <xs:element name="ranges" type="tns:range" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  93       <xs:element name="scores" type="xs:float" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  94     </xs:sequence>
  95   </xs:complexType>
  96
  97   <xs:complexType name="range">
  98     <xs:sequence>
  99       <xs:element name="from" type="xs:int"/>
 100       <xs:element name="to" type="xs:int"/>
 101     </xs:sequence>
 102   </xs:complexType>
 103
 104   <xs:complexType name="ResultNotAvailableException">
 105     <xs:sequence>
 106       <xs:element name="message" type="xs:string" minOccurs="0"/>
 107     </xs:sequence>
 108   </xs:complexType>
 109
 110   <xs:complexType name="presetAnalize">
 111     <xs:sequence>
 112       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 113       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
 114     </xs:sequence>
 115   </xs:complexType>
 116
 117   <xs:complexType name="fastaSequence">
 118     <xs:sequence>
 119       <xs:element name="id" type="xs:string" minOccurs="0"/>
 120       <xs:element name="sequence" type="xs:string" minOccurs="0"/>
 121     </xs:sequence>
 122   </xs:complexType>
 123
 124   <xs:complexType name="preset">
 125     <xs:sequence>
 126       <xs:element name="name" type="xs:string"/>
 127       <xs:element name="description" type="xs:string" minOccurs="0"/>
 128       <xs:element name="optlist" minOccurs="0">
 129         <xs:complexType>
 130           <xs:sequence>
 131             <xs:element name="option" type="xs:string" maxOccurs="unbounded"/>
 132           </xs:sequence>
 133         </xs:complexType>
 134       </xs:element>
 135     </xs:sequence>
 136   </xs:complexType>
 137
 138   <xs:complexType name="presetAnalizeResponse">
 139     <xs:sequence>
 140       <xs:element name="return" type="xs:string" minOccurs="0"/>
 141     </xs:sequence>
 142   </xs:complexType>
 143
 144   <xs:complexType name="UnsupportedRuntimeException">
 145     <xs:sequence>
 146       <xs:element name="message" type="xs:string" minOccurs="0"/>
 147     </xs:sequence>
 148   </xs:complexType>
 149
 150   <xs:complexType name="LimitExceededException">
 151     <xs:sequence>
 152       <xs:element name="actualNumberofSequences" type="xs:int"/>
 153       <xs:element name="message" type="xs:string" minOccurs="0"/>
 154       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
 155       <xs:element name="sequenceLenghtActual" type="xs:int"/>
 156       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
 157     </xs:sequence>
 158   </xs:complexType>
 159
 160   <xs:complexType name="JobSubmissionException">
 161     <xs:sequence>
 162       <xs:element name="message" type="xs:string" minOccurs="0"/>
 163     </xs:sequence>
 164   </xs:complexType>
 165
 166   <xs:complexType name="WrongParameterException">
 167     <xs:sequence>
 168       <xs:element name="message" type="xs:string" minOccurs="0"/>
 169     </xs:sequence>
 170   </xs:complexType>
 171
 172   <xs:complexType name="getLimits">
 173     <xs:sequence/>
 174   </xs:complexType>
 175
 176   <xs:complexType name="getLimitsResponse">
 177     <xs:sequence>
 178       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 179     </xs:sequence>
 180   </xs:complexType>
 181
 182   <xs:complexType name="limitsManager">
 183     <xs:sequence>
 184       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 185       <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 186     </xs:sequence>
 187   </xs:complexType>
 188
 189   <xs:complexType name="limit">
 190     <xs:sequence>
 191       <xs:element name="preset" type="xs:string" minOccurs="0"/>
 192       <xs:element name="seqNumber" type="xs:int"/>
 193       <xs:element name="seqLength" type="xs:int"/>
 194     </xs:sequence>
 195     <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
 196   </xs:complexType>
 197
 198   <xs:complexType name="getLimit">
 199     <xs:sequence>
 200       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 201     </xs:sequence>
 202   </xs:complexType>
 203
 204   <xs:complexType name="getLimitResponse">
 205     <xs:sequence>
 206       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 207     </xs:sequence>
 208   </xs:complexType>
 209
 210   <xs:complexType name="getPresets">
 211     <xs:sequence/>
 212   </xs:complexType>
 213
 214   <xs:complexType name="getPresetsResponse">
 215     <xs:sequence>
 216       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 217     </xs:sequence>
 218   </xs:complexType>
 219
 220   <xs:complexType name="presetManager">
 221     <xs:sequence>
 222       <xs:element name="runnerClassName" type="xs:string"/>
 223       <xs:element name="preset" type="tns:preset" maxOccurs="unbounded"/>
 224     </xs:sequence>
 225   </xs:complexType>
 226
 227   <xs:complexType name="cancelJob">
 228     <xs:sequence>
 229       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 230     </xs:sequence>
 231   </xs:complexType>
 232
 233   <xs:complexType name="cancelJobResponse">
 234     <xs:sequence>
 235       <xs:element name="return" type="xs:boolean"/>
 236     </xs:sequence>
 237   </xs:complexType>
 238
 239   <xs:complexType name="customAnalize">
 240     <xs:sequence>
 241       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 242       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 243     </xs:sequence>
 244   </xs:complexType>
 245
 246   <xs:complexType name="option">
 247     <xs:sequence>
 248       <xs:element name="description" type="xs:string"/>
 249       <xs:element name="optionNames" type="xs:string" maxOccurs="unbounded"/>
 250       <xs:element name="name" type="xs:string"/>
 251       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
 252       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
 253     </xs:sequence>
 254     <xs:attribute name="isRequired" type="xs:boolean" use="required"/>
 255   </xs:complexType>
 256
 257   <xs:complexType name="customAnalizeResponse">
 258     <xs:sequence>
 259       <xs:element name="return" type="xs:string" minOccurs="0"/>
 260     </xs:sequence>
 261   </xs:complexType>
 262
 263   <xs:complexType name="pullExecStatistics">
 264     <xs:sequence>
 265       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 266       <xs:element name="position" type="xs:long"/>
 267     </xs:sequence>
 268   </xs:complexType>
 269
 270   <xs:complexType name="pullExecStatisticsResponse">
 271     <xs:sequence>
 272       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 273     </xs:sequence>
 274   </xs:complexType>
 275
 276   <xs:complexType name="chunkHolder">
 277     <xs:sequence>
 278       <xs:element name="chunk" type="xs:string" minOccurs="0"/>
 279       <xs:element name="position" type="xs:long"/>
 280     </xs:sequence>
 281   </xs:complexType>
 282
 283   <xs:complexType name="getJobStatus">
 284     <xs:sequence>
 285       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 286     </xs:sequence>
 287   </xs:complexType>
 288
 289   <xs:complexType name="getJobStatusResponse">
 290     <xs:sequence>
 291       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
 292     </xs:sequence>
 293   </xs:complexType>
 294
 295   <xs:complexType name="analize">
 296     <xs:sequence>
 297       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 298     </xs:sequence>
 299   </xs:complexType>
 300
 301   <xs:complexType name="analizeResponse">
 302     <xs:sequence>
 303       <xs:element name="return" type="xs:string" minOccurs="0"/>
 304     </xs:sequence>
 305   </xs:complexType>
 306
 307   <xs:complexType name="getRunnerOptions">
 308     <xs:sequence/>
 309   </xs:complexType>
 310
 311   <xs:complexType name="getRunnerOptionsResponse">
 312     <xs:sequence>
 313       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
 314     </xs:sequence>
 315   </xs:complexType>
 316
 317   <xs:complexType name="runnerConfig">
 318     <xs:sequence>
 319       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 320       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 321       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
 322       <xs:element name="runnerClassName" type="xs:string"/>
 323     </xs:sequence>
 324   </xs:complexType>
 325
 326   <xs:complexType name="parameter">
 327     <xs:complexContent>
 328       <xs:extension base="tns:option">
 329         <xs:sequence>
 330           <xs:element name="possibleValues" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
 331           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 332         </xs:sequence>
 333       </xs:extension>
 334     </xs:complexContent>
 335   </xs:complexType>
 336
 337   <xs:complexType name="valueConstrain">
 338     <xs:sequence>
 339       <xs:element name="type" type="tns:type"/>
 340       <xs:element name="max" type="xs:string" minOccurs="0"/>
 341       <xs:element name="min" type="xs:string" minOccurs="0"/>
 342     </xs:sequence>
 343   </xs:complexType>
 344
 345   <xs:simpleType name="jobStatus">
 346     <xs:restriction base="xs:string">
 347       <xs:enumeration value="PENDING"/>
 348       <xs:enumeration value="RUNNING"/>
 349       <xs:enumeration value="CANCELLED"/>
 350       <xs:enumeration value="FINISHED"/>
 351       <xs:enumeration value="FAILED"/>
 352       <xs:enumeration value="UNDEFINED"/>
 353       <xs:enumeration value="STARTED"/>
 354       <xs:enumeration value="SUBMITTED"/>
 355       <xs:enumeration value="COLLECTED"/>
 356     </xs:restriction>
 357   </xs:simpleType>
 358
 359   <xs:simpleType name="type">
 360     <xs:restriction base="xs:string">
 361       <xs:enumeration value="Integer"/>
 362       <xs:enumeration value="Float"/>
 363     </xs:restriction>
 364   </xs:simpleType>
 365 </xs:schema>
 366