webservices/compbio/ws/server/resource/JronnWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/12/2010/" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="analize" type="tns:analize"/>
  15
  16   <xs:element name="analizeResponse" type="tns:analizeResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAnalize" type="tns:customAnalize"/>
  23
  24   <xs:element name="customAnalizeResponse" type="tns:customAnalizeResponse"/>
  25
  26   <xs:element name="getAnnotation" type="tns:getAnnotation"/>
  27
  28   <xs:element name="getAnnotationResponse" type="tns:getAnnotationResponse"/>
  29
  30   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  31
  32   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  33
  34   <xs:element name="getLimit" type="tns:getLimit"/>
  35
  36   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  37
  38   <xs:element name="getLimits" type="tns:getLimits"/>
  39
  40   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  41
  42   <xs:element name="getPresets" type="tns:getPresets"/>
  43
  44   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="limits" type="tns:limitsManager"/>
  51
  52   <xs:element name="presetAnalize" type="tns:presetAnalize"/>
  53
  54   <xs:element name="presetAnalizeResponse" type="tns:presetAnalizeResponse"/>
  55
  56   <xs:element name="presets" type="tns:presetManager"/>
  57
  58   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  59
  60   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  61
  62   <xs:element name="runnerConfig" type="tns:runnerConfig"/>
  63
  64   <xs:complexType name="getRunnerOptions">
  65     <xs:sequence/>
  66   </xs:complexType>
  67
  68   <xs:complexType name="getRunnerOptionsResponse">
  69     <xs:sequence>
  70       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
  71     </xs:sequence>
  72   </xs:complexType>
  73
  74   <xs:complexType name="runnerConfig">
  75     <xs:sequence>
  76       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  77       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
  78       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
  79       <xs:element name="runnerClassName" type="xs:string"/>
  80     </xs:sequence>
  81   </xs:complexType>
  82
  83   <xs:complexType name="option">
  84     <xs:sequence>
  85       <xs:element name="description" type="xs:string"/>
  86       <xs:element name="optionNames" type="xs:string" maxOccurs="unbounded"/>
  87       <xs:element name="name" type="xs:string"/>
  88       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
  89       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
  90     </xs:sequence>
  91     <xs:attribute name="isRequired" type="xs:boolean" use="required"/>
  92   </xs:complexType>
  93
  94   <xs:complexType name="parameter">
  95     <xs:complexContent>
  96       <xs:extension base="tns:option">
  97         <xs:sequence>
  98           <xs:element name="possibleValues" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
  99           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 100         </xs:sequence>
 101       </xs:extension>
 102     </xs:complexContent>
 103   </xs:complexType>
 104
 105   <xs:complexType name="valueConstrain">
 106     <xs:sequence>
 107       <xs:element name="type" type="tns:type"/>
 108       <xs:element name="max" type="xs:string" minOccurs="0"/>
 109       <xs:element name="min" type="xs:string" minOccurs="0"/>
 110     </xs:sequence>
 111   </xs:complexType>
 112
 113   <xs:complexType name="analize">
 114     <xs:sequence>
 115       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 116     </xs:sequence>
 117   </xs:complexType>
 118
 119   <xs:complexType name="fastaSequence">
 120     <xs:sequence>
 121       <xs:element name="id" type="xs:string" minOccurs="0"/>
 122       <xs:element name="sequence" type="xs:string" minOccurs="0"/>
 123     </xs:sequence>
 124   </xs:complexType>
 125
 126   <xs:complexType name="analizeResponse">
 127     <xs:sequence>
 128       <xs:element name="return" type="xs:string" minOccurs="0"/>
 129     </xs:sequence>
 130   </xs:complexType>
 131
 132   <xs:complexType name="UnsupportedRuntimeException">
 133     <xs:sequence>
 134       <xs:element name="message" type="xs:string" minOccurs="0"/>
 135     </xs:sequence>
 136   </xs:complexType>
 137
 138   <xs:complexType name="LimitExceededException">
 139     <xs:sequence>
 140       <xs:element name="actualNumberofSequences" type="xs:int"/>
 141       <xs:element name="message" type="xs:string" minOccurs="0"/>
 142       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
 143       <xs:element name="sequenceLenghtActual" type="xs:int"/>
 144       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
 145     </xs:sequence>
 146   </xs:complexType>
 147
 148   <xs:complexType name="JobSubmissionException">
 149     <xs:sequence>
 150       <xs:element name="message" type="xs:string" minOccurs="0"/>
 151     </xs:sequence>
 152   </xs:complexType>
 153
 154   <xs:complexType name="getJobStatus">
 155     <xs:sequence>
 156       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 157     </xs:sequence>
 158   </xs:complexType>
 159
 160   <xs:complexType name="getJobStatusResponse">
 161     <xs:sequence>
 162       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
 163     </xs:sequence>
 164   </xs:complexType>
 165
 166   <xs:complexType name="presetAnalize">
 167     <xs:sequence>
 168       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 169       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
 170     </xs:sequence>
 171   </xs:complexType>
 172
 173   <xs:complexType name="preset">
 174     <xs:sequence>
 175       <xs:element name="name" type="xs:string"/>
 176       <xs:element name="description" type="xs:string" minOccurs="0"/>
 177       <xs:element name="optlist" minOccurs="0">
 178         <xs:complexType>
 179           <xs:sequence>
 180             <xs:element name="option" type="xs:string" maxOccurs="unbounded"/>
 181           </xs:sequence>
 182         </xs:complexType>
 183       </xs:element>
 184     </xs:sequence>
 185   </xs:complexType>
 186
 187   <xs:complexType name="presetAnalizeResponse">
 188     <xs:sequence>
 189       <xs:element name="return" type="xs:string" minOccurs="0"/>
 190     </xs:sequence>
 191   </xs:complexType>
 192
 193   <xs:complexType name="WrongParameterException">
 194     <xs:sequence>
 195       <xs:element name="message" type="xs:string" minOccurs="0"/>
 196     </xs:sequence>
 197   </xs:complexType>
 198
 199   <xs:complexType name="getAnnotation">
 200     <xs:sequence>
 201       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 202     </xs:sequence>
 203   </xs:complexType>
 204
 205   <xs:complexType name="getAnnotationResponse">
 206     <xs:sequence>
 207       <xs:element name="return" type="tns:scoreManager" minOccurs="0"/>
 208     </xs:sequence>
 209   </xs:complexType>
 210
 211   <xs:complexType name="scoreManager">
 212     <xs:sequence>
 213       <xs:element name="seqScores" type="tns:scoreHolder" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 214     </xs:sequence>
 215   </xs:complexType>
 216
 217   <xs:complexType name="scoreHolder">
 218     <xs:sequence>
 219       <xs:element name="id" type="xs:string" minOccurs="0"/>
 220       <xs:element name="scores" type="tns:score" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 221     </xs:sequence>
 222   </xs:complexType>
 223
 224   <xs:complexType name="score">
 225     <xs:sequence>
 226       <xs:element name="method" type="xs:string" minOccurs="0"/>
 227       <xs:element name="ranges" type="tns:range" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 228       <xs:element name="scores" type="xs:float" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 229     </xs:sequence>
 230   </xs:complexType>
 231
 232   <xs:complexType name="range">
 233     <xs:sequence>
 234       <xs:element name="from" type="xs:int"/>
 235       <xs:element name="to" type="xs:int"/>
 236     </xs:sequence>
 237   </xs:complexType>
 238
 239   <xs:complexType name="ResultNotAvailableException">
 240     <xs:sequence>
 241       <xs:element name="message" type="xs:string" minOccurs="0"/>
 242     </xs:sequence>
 243   </xs:complexType>
 244
 245   <xs:complexType name="customAnalize">
 246     <xs:sequence>
 247       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 248       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 249     </xs:sequence>
 250   </xs:complexType>
 251
 252   <xs:complexType name="customAnalizeResponse">
 253     <xs:sequence>
 254       <xs:element name="return" type="xs:string" minOccurs="0"/>
 255     </xs:sequence>
 256   </xs:complexType>
 257
 258   <xs:complexType name="getLimits">
 259     <xs:sequence/>
 260   </xs:complexType>
 261
 262   <xs:complexType name="getLimitsResponse">
 263     <xs:sequence>
 264       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 265     </xs:sequence>
 266   </xs:complexType>
 267
 268   <xs:complexType name="limitsManager">
 269     <xs:sequence>
 270       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 271       <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 272     </xs:sequence>
 273   </xs:complexType>
 274
 275   <xs:complexType name="limit">
 276     <xs:sequence>
 277       <xs:element name="preset" type="xs:string" minOccurs="0"/>
 278       <xs:element name="seqNumber" type="xs:int"/>
 279       <xs:element name="seqLength" type="xs:int"/>
 280     </xs:sequence>
 281     <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
 282   </xs:complexType>
 283
 284   <xs:complexType name="getPresets">
 285     <xs:sequence/>
 286   </xs:complexType>
 287
 288   <xs:complexType name="getPresetsResponse">
 289     <xs:sequence>
 290       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 291     </xs:sequence>
 292   </xs:complexType>
 293
 294   <xs:complexType name="presetManager">
 295     <xs:sequence>
 296       <xs:element name="runnerClassName" type="xs:string"/>
 297       <xs:element name="preset" type="tns:preset" maxOccurs="unbounded"/>
 298     </xs:sequence>
 299   </xs:complexType>
 300
 301   <xs:complexType name="getLimit">
 302     <xs:sequence>
 303       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 304     </xs:sequence>
 305   </xs:complexType>
 306
 307   <xs:complexType name="getLimitResponse">
 308     <xs:sequence>
 309       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 310     </xs:sequence>
 311   </xs:complexType>
 312
 313   <xs:complexType name="cancelJob">
 314     <xs:sequence>
 315       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 316     </xs:sequence>
 317   </xs:complexType>
 318
 319   <xs:complexType name="cancelJobResponse">
 320     <xs:sequence>
 321       <xs:element name="return" type="xs:boolean"/>
 322     </xs:sequence>
 323   </xs:complexType>
 324
 325   <xs:complexType name="pullExecStatistics">
 326     <xs:sequence>
 327       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 328       <xs:element name="position" type="xs:long"/>
 329     </xs:sequence>
 330   </xs:complexType>
 331
 332   <xs:complexType name="pullExecStatisticsResponse">
 333     <xs:sequence>
 334       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 335     </xs:sequence>
 336   </xs:complexType>
 337
 338   <xs:complexType name="chunkHolder">
 339     <xs:sequence>
 340       <xs:element name="chunk" type="xs:string" minOccurs="0"/>
 341       <xs:element name="position" type="xs:long"/>
 342     </xs:sequence>
 343   </xs:complexType>
 344
 345   <xs:simpleType name="type">
 346     <xs:restriction base="xs:string">
 347       <xs:enumeration value="Integer"/>
 348       <xs:enumeration value="Float"/>
 349     </xs:restriction>
 350   </xs:simpleType>
 351
 352   <xs:simpleType name="jobStatus">
 353     <xs:restriction base="xs:string">
 354       <xs:enumeration value="PENDING"/>
 355       <xs:enumeration value="RUNNING"/>
 356       <xs:enumeration value="CANCELLED"/>
 357       <xs:enumeration value="FINISHED"/>
 358       <xs:enumeration value="FAILED"/>
 359       <xs:enumeration value="UNDEFINED"/>
 360       <xs:enumeration value="STARTED"/>
 361       <xs:enumeration value="SUBMITTED"/>
 362       <xs:enumeration value="COLLECTED"/>
 363     </xs:restriction>
 364   </xs:simpleType>
 365 </xs:schema>
 366