website/dm_javadoc/compbio/data/sequence/class-use/Range.html

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   7 Uses of Class compbio.data.sequence.Range\r
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  84 <B>Uses of Class<br>compbio.data.sequence.Range</B></H2>\r
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  90 Packages that use <A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A></FONT></TH>\r
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  93 <TD><A HREF="#compbio.data.sequence"><B>compbio.data.sequence</B></A></TD>\r
  94 <TD>A data model for multiple sequence alignment web services and utility methods
  95  that work on the objects of this model.&nbsp;</TD>\r
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  98 &nbsp;\r
  99 <P>\r
 100 <A NAME="compbio.data.sequence"><!-- --></A>\r
 101 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 102 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 103 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 104 Uses of <A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A> in <A HREF="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</A></FONT></TH>\r
 105 </TR>\r
 106 </TABLE>\r
 107 &nbsp;\r
 108 <P>\r
 109 \r
 110 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 111 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 112 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</A> that return types with arguments of type <A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A></FONT></TH>\r
 113 </TR>\r
 114 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 115 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 116 <CODE>&nbsp;<A HREF="http://java.sun.com/javase/6/docs/api/java/util/TreeSet.html?is-external=true" title="class or interface in java.util">TreeSet</A>&lt;<A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A>&gt;</CODE></FONT></TD>\r
 117 <TD><CODE><B>Score.</B><B><A HREF="../../../../compbio/data/sequence/Score.html#getRanges()">getRanges</A></B>()</CODE>\r
 118 \r
 119 <BR>\r
 120 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Return Ranges if any Collections.EMPTY_SET otherwise</TD>\r
 121 </TR>\r
 122 </TABLE>\r
 123 &nbsp;\r
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 125 \r
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 127 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 128 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</A> with parameters of type <A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A></FONT></TH>\r
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 131 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 132 <CODE>&nbsp;int</CODE></FONT></TD>\r
 133 <TD><CODE><B>Range.</B><B><A HREF="../../../../compbio/data/sequence/Range.html#compareTo(compbio.data.sequence.Range)">compareTo</A></B>(<A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A>&nbsp;o)</CODE>\r
 134 \r
 135 <BR>\r
 136 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
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 138 </TABLE>\r
 139 &nbsp;\r
 140 <P>\r
 141 \r
 142 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 143 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 144 <TH ALIGN="left" COLSPAN="2">Method parameters in <A HREF="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</A> with type arguments of type <A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A></FONT></TH>\r
 145 </TR>\r
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 147 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 148 <CODE>&nbsp;void</CODE></FONT></TD>\r
 149 <TD><CODE><B>Score.</B><B><A HREF="../../../../compbio/data/sequence/Score.html#setRanges(java.util.TreeSet)">setRanges</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/util/TreeSet.html?is-external=true" title="class or interface in java.util">TreeSet</A>&lt;<A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A>&gt;&nbsp;ranges)</CODE>\r
 150 \r
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 159 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 160 <TH ALIGN="left" COLSPAN="2">Constructor parameters in <A HREF="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</A> with type arguments of type <A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A></FONT></TH>\r
 161 </TR>\r
 162 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 163 <TD><CODE><B><A HREF="../../../../compbio/data/sequence/Score.html#Score(java.lang.Enum, java.util.ArrayList, java.util.TreeSet)">Score</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true" title="class or interface in java.lang">Enum</A>&lt;?&gt;&nbsp;method,\r
 164       <A HREF="http://java.sun.com/javase/6/docs/api/java/util/ArrayList.html?is-external=true" title="class or interface in java.util">ArrayList</A>&lt;<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Float.html?is-external=true" title="class or interface in java.lang">Float</A>&gt;&nbsp;scores,\r
 165       <A HREF="http://java.sun.com/javase/6/docs/api/java/util/TreeSet.html?is-external=true" title="class or interface in java.util">TreeSet</A>&lt;<A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A>&gt;&nbsp;ranges)</CODE>\r
 166 \r
 167 <BR>\r
 168 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 169 </TR>\r
 170 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 171 <TD><CODE><B><A HREF="../../../../compbio/data/sequence/Score.html#Score(java.lang.Enum, java.util.TreeSet)">Score</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true" title="class or interface in java.lang">Enum</A>&lt;?&gt;&nbsp;method,\r
 172       <A HREF="http://java.sun.com/javase/6/docs/api/java/util/TreeSet.html?is-external=true" title="class or interface in java.util">TreeSet</A>&lt;<A HREF="../../../../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A>&gt;&nbsp;ranges)</CODE>\r
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