Adding updated javadoc
[jabaws.git] / website / dm_javadoc / compbio / ws / client / Services.html
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">\r
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4 <HEAD>\r
5 <!-- Generated by javadoc (build 1.6.0_21) on Tue Dec 21 18:32:59 GMT 2010 -->\r
6 <TITLE>\r
7 Services\r
8 </TITLE>\r
9 \r
10 <META NAME="date" CONTENT="2010-12-21">\r
11 \r
12 <LINK REL ="stylesheet" TYPE="text/css" HREF="../../../stylesheet.css" TITLE="Style">\r
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14 <SCRIPT type="text/javascript">\r
15 function windowTitle()\r
16 {\r
17     if (location.href.indexOf('is-external=true') == -1) {\r
18         parent.document.title="Services";\r
19     }\r
20 }\r
21 </SCRIPT>\r
22 <NOSCRIPT>\r
23 </NOSCRIPT>\r
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26 \r
27 <BODY BGCOLOR="white" onload="windowTitle();">\r
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40   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
41   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>\r
42   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT>&nbsp;</TD>\r
43   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="class-use/Services.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>\r
44   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>\r
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55 \r
56 <TR>\r
57 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
58 &nbsp;<A HREF="../../../compbio/ws/client/MetadataHelper.html" title="class in compbio.ws.client"><B>PREV CLASS</B></A>&nbsp;\r
59 &nbsp;<A HREF="../../../compbio/ws/client/WSTester.html" title="class in compbio.ws.client"><B>NEXT CLASS</B></A></FONT></TD>\r
60 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
61   <A HREF="../../../index.html?compbio/ws/client/Services.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
62 &nbsp;<A HREF="Services.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;\r
63 &nbsp;<SCRIPT type="text/javascript">\r
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73 \r
74 \r
75 </FONT></TD>\r
76 </TR>\r
77 <TR>\r
78 <TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">\r
79   SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;<A HREF="#enum_constant_summary">ENUM CONSTANTS</A>&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD>\r
80 <TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">\r
81 DETAIL:&nbsp;<A HREF="#enum_constant_detail">ENUM CONSTANTS</A>&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#method_detail">METHOD</A></FONT></TD>\r
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85 <!-- ========= END OF TOP NAVBAR ========= -->\r
86 \r
87 <HR>\r
88 <!-- ======== START OF CLASS DATA ======== -->\r
89 <H2>\r
90 <FONT SIZE="-1">\r
91 compbio.ws.client</FONT>\r
92 <BR>\r
93 Enum Services</H2>\r
94 <PRE>\r
95 <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">java.lang.Object</A>\r
96   <IMG SRC="../../../resources/inherit.gif" ALT="extended by "><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true" title="class or interface in java.lang">java.lang.Enum</A>&lt;<A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>&gt;\r
97       <IMG SRC="../../../resources/inherit.gif" ALT="extended by "><B>compbio.ws.client.Services</B>\r
98 </PRE>\r
99 <DL>\r
100 <DT><B>All Implemented Interfaces:</B> <DD><A HREF="http://java.sun.com/javase/6/docs/api/java/io/Serializable.html?is-external=true" title="class or interface in java.io">Serializable</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Comparable.html?is-external=true" title="class or interface in java.lang">Comparable</A>&lt;<A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>&gt;</DD>\r
101 </DL>\r
102 <HR>\r
103 <DL>\r
104 <DT><PRE>public enum <B>Services</B><DT>extends <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true" title="class or interface in java.lang">Enum</A>&lt;<A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>&gt;</DL>\r
105 </PRE>\r
106 \r
107 <P>\r
108 List of web services currently supported by JABAWS version 2\r
109 <P>\r
110 \r
111 <P>\r
112 <HR>\r
113 \r
114 <P>\r
115 <!-- =========== ENUM CONSTANT SUMMARY =========== -->\r
116 \r
117 <A NAME="enum_constant_summary"><!-- --></A>\r
118 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
119 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
120 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
121 <B>Enum Constant Summary</B></FONT></TH>\r
122 </TR>\r
123 <TR BGCOLOR="white" CLASS="TableRowColor">\r
124 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#AAConWS">AAConWS</A></B></CODE>\r
125 \r
126 <BR>\r
127 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
128 </TR>\r
129 <TR BGCOLOR="white" CLASS="TableRowColor">\r
130 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#ClustalWS">ClustalWS</A></B></CODE>\r
131 \r
132 <BR>\r
133 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
134 </TR>\r
135 <TR BGCOLOR="white" CLASS="TableRowColor">\r
136 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#MafftWS">MafftWS</A></B></CODE>\r
137 \r
138 <BR>\r
139 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
140 </TR>\r
141 <TR BGCOLOR="white" CLASS="TableRowColor">\r
142 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#MuscleWS">MuscleWS</A></B></CODE>\r
143 \r
144 <BR>\r
145 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
146 </TR>\r
147 <TR BGCOLOR="white" CLASS="TableRowColor">\r
148 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#ProbconsWS">ProbconsWS</A></B></CODE>\r
149 \r
150 <BR>\r
151 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
152 </TR>\r
153 <TR BGCOLOR="white" CLASS="TableRowColor">\r
154 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#TcoffeeWS">TcoffeeWS</A></B></CODE>\r
155 \r
156 <BR>\r
157 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
158 </TR>\r
159 </TABLE>\r
160 &nbsp;\r
161 <!-- ========== METHOD SUMMARY =========== -->\r
162 \r
163 <A NAME="method_summary"><!-- --></A>\r
164 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
165 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
166 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
167 <B>Method Summary</B></FONT></TH>\r
168 </TR>\r
169 <TR BGCOLOR="white" CLASS="TableRowColor">\r
170 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
171 <CODE>static&nbsp;<A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A></CODE></FONT></TD>\r
172 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#getService(java.lang.String)">getService</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;servName)</CODE>\r
173 \r
174 <BR>\r
175 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
176 </TR>\r
177 <TR BGCOLOR="white" CLASS="TableRowColor">\r
178 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
179 <CODE>static&nbsp;<A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A></CODE></FONT></TD>\r
180 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#valueOf(java.lang.String)">valueOf</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;name)</CODE>\r
181 \r
182 <BR>\r
183 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Returns the enum constant of this type with the specified name.</TD>\r
184 </TR>\r
185 <TR BGCOLOR="white" CLASS="TableRowColor">\r
186 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
187 <CODE>static&nbsp;<A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>[]</CODE></FONT></TD>\r
188 <TD><CODE><B><A HREF="../../../compbio/ws/client/Services.html#values()">values</A></B>()</CODE>\r
189 \r
190 <BR>\r
191 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Returns an array containing the constants of this enum type, in
192 the order they are declared.</TD>\r
193 </TR>\r
194 </TABLE>\r
195 &nbsp;<A NAME="methods_inherited_from_class_java.lang.Enum"><!-- --></A>\r
196 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
197 <TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor">\r
198 <TH ALIGN="left"><B>Methods inherited from class java.lang.<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true" title="class or interface in java.lang">Enum</A></B></TH>\r
199 </TR>\r
200 <TR BGCOLOR="white" CLASS="TableRowColor">\r
201 <TD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#compareTo(E)" title="class or interface in java.lang">compareTo</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#equals(java.lang.Object)" title="class or interface in java.lang">equals</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#getDeclaringClass()" title="class or interface in java.lang">getDeclaringClass</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#hashCode()" title="class or interface in java.lang">hashCode</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#name()" title="class or interface in java.lang">name</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#ordinal()" title="class or interface in java.lang">ordinal</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#toString()" title="class or interface in java.lang">toString</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Enum.html?is-external=true#valueOf(java.lang.Class, java.lang.String)" title="class or interface in java.lang">valueOf</A></CODE></TD>\r
202 </TR>\r
203 </TABLE>\r
204 &nbsp;<A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A>\r
205 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
206 <TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor">\r
207 <TH ALIGN="left"><B>Methods inherited from class java.lang.<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</A></B></TH>\r
208 </TR>\r
209 <TR BGCOLOR="white" CLASS="TableRowColor">\r
210 <TD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true#getClass()" title="class or interface in java.lang">getClass</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true#notify()" title="class or interface in java.lang">notify</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true#notifyAll()" title="class or interface in java.lang">notifyAll</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait()" title="class or interface in java.lang">wait</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait(long)" title="class or interface in java.lang">wait</A>, <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait(long, int)" title="class or interface in java.lang">wait</A></CODE></TD>\r
211 </TR>\r
212 </TABLE>\r
213 &nbsp;\r
214 <P>\r
215 \r
216 <!-- ============ ENUM CONSTANT DETAIL =========== -->\r
217 \r
218 <A NAME="enum_constant_detail"><!-- --></A>\r
219 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
220 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
221 <TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">\r
222 <B>Enum Constant Detail</B></FONT></TH>\r
223 </TR>\r
224 </TABLE>\r
225 \r
226 <A NAME="MafftWS"><!-- --></A><H3>\r
227 MafftWS</H3>\r
228 <PRE>\r
229 public static final <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>MafftWS</B></PRE>\r
230 <DL>\r
231 <DL>\r
232 </DL>\r
233 </DL>\r
234 <HR>\r
235 \r
236 <A NAME="MuscleWS"><!-- --></A><H3>\r
237 MuscleWS</H3>\r
238 <PRE>\r
239 public static final <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>MuscleWS</B></PRE>\r
240 <DL>\r
241 <DL>\r
242 </DL>\r
243 </DL>\r
244 <HR>\r
245 \r
246 <A NAME="ClustalWS"><!-- --></A><H3>\r
247 ClustalWS</H3>\r
248 <PRE>\r
249 public static final <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>ClustalWS</B></PRE>\r
250 <DL>\r
251 <DL>\r
252 </DL>\r
253 </DL>\r
254 <HR>\r
255 \r
256 <A NAME="TcoffeeWS"><!-- --></A><H3>\r
257 TcoffeeWS</H3>\r
258 <PRE>\r
259 public static final <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>TcoffeeWS</B></PRE>\r
260 <DL>\r
261 <DL>\r
262 </DL>\r
263 </DL>\r
264 <HR>\r
265 \r
266 <A NAME="ProbconsWS"><!-- --></A><H3>\r
267 ProbconsWS</H3>\r
268 <PRE>\r
269 public static final <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>ProbconsWS</B></PRE>\r
270 <DL>\r
271 <DL>\r
272 </DL>\r
273 </DL>\r
274 <HR>\r
275 \r
276 <A NAME="AAConWS"><!-- --></A><H3>\r
277 AAConWS</H3>\r
278 <PRE>\r
279 public static final <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>AAConWS</B></PRE>\r
280 <DL>\r
281 <DL>\r
282 </DL>\r
283 </DL>\r
284 \r
285 <!-- ============ METHOD DETAIL ========== -->\r
286 \r
287 <A NAME="method_detail"><!-- --></A>\r
288 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
289 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
290 <TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">\r
291 <B>Method Detail</B></FONT></TH>\r
292 </TR>\r
293 </TABLE>\r
294 \r
295 <A NAME="values()"><!-- --></A><H3>\r
296 values</H3>\r
297 <PRE>\r
298 public static <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>[] <B>values</B>()</PRE>\r
299 <DL>\r
300 <DD>Returns an array containing the constants of this enum type, in
301 the order they are declared.  This method may be used to iterate
302 over the constants as follows:
303 <pre>
304 for (Services c : Services.values())
305 &nbsp;   System.out.println(c);
306 </pre>\r
307 <P>\r
308 <DD><DL>\r
309 \r
310 <DT><B>Returns:</B><DD>an array containing the constants of this enum type, in
311 the order they are declared</DL>\r
312 </DD>\r
313 </DL>\r
314 <HR>\r
315 \r
316 <A NAME="valueOf(java.lang.String)"><!-- --></A><H3>\r
317 valueOf</H3>\r
318 <PRE>\r
319 public static <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>valueOf</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;name)</PRE>\r
320 <DL>\r
321 <DD>Returns the enum constant of this type with the specified name.
322 The string must match <I>exactly</I> an identifier used to declare an
323 enum constant in this type.  (Extraneous whitespace characters are 
324 not permitted.)\r
325 <P>\r
326 <DD><DL>\r
327 <DT><B>Parameters:</B><DD><CODE>name</CODE> - the name of the enum constant to be returned.\r
328 <DT><B>Returns:</B><DD>the enum constant with the specified name\r
329 <DT><B>Throws:</B>\r
330 <DD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/IllegalArgumentException.html?is-external=true" title="class or interface in java.lang">IllegalArgumentException</A></CODE> - if this enum type has no constant
331 with the specified name\r
332 <DD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/NullPointerException.html?is-external=true" title="class or interface in java.lang">NullPointerException</A></CODE> - if the argument is null</DL>\r
333 </DD>\r
334 </DL>\r
335 <HR>\r
336 \r
337 <A NAME="getService(java.lang.String)"><!-- --></A><H3>\r
338 getService</H3>\r
339 <PRE>\r
340 public static <A HREF="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A> <B>getService</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;servName)</PRE>\r
341 <DL>\r
342 <DD><DL>\r
343 </DL>\r
344 </DD>\r
345 </DL>\r
346 <!-- ========= END OF CLASS DATA ========= -->\r
347 <HR>\r
348 \r
349 \r
350 <!-- ======= START OF BOTTOM NAVBAR ====== -->\r
351 <A NAME="navbar_bottom"><!-- --></A>\r
352 <A HREF="#skip-navbar_bottom" title="Skip navigation links"></A>\r
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354 <TR>\r
355 <TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">\r
356 <A NAME="navbar_bottom_firstrow"><!-- --></A>\r
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