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  76 <li>Summary:&nbsp;</li>
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  95 <div class="subTitle">compbio.data.sequence</div>
  96 <h2 title="Enum RNAStructReader.AlifoldLine" class="title">Enum RNAStructReader.AlifoldLine</h2>
  97 </div>
  98 <div class="contentContainer">
  99 <ul class="inheritance">
 100 <li>java.lang.Object</li>
 101 <li>
 102 <ul class="inheritance">
 103 <li>java.lang.Enum&lt;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a>&gt;</li>
 104 <li>
 105 <ul class="inheritance">
 106 <li>compbio.data.sequence.RNAStructReader.AlifoldLine</li>
 107 </ul>
 108 </li>
 109 </ul>
 110 </li>
 111 </ul>
 112 <div class="description">
 113 <ul class="blockList">
 114 <li class="blockList">
 115 <dl>
 116 <dt>All Implemented Interfaces:</dt>
 117 <dd>java.io.Serializable, java.lang.Comparable&lt;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a>&gt;</dd>
 118 </dl>
 119 <dl>
 120 <dt>Enclosing class:</dt>
 121 <dd><a href="../../../compbio/data/sequence/RNAStructReader.html" title="class in compbio.data.sequence">RNAStructReader</a></dd>
 122 </dl>
 123 <hr>
 124 <br>
 125 <pre>static enum <span class="typeNameLabel">RNAStructReader.AlifoldLine</span>
 126 extends java.lang.Enum&lt;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a>&gt;</pre>
 127 </li>
 128 </ul>
 129 </div>
 130 <div class="summary">
 131 <ul class="blockList">
 132 <li class="blockList">
 133 <!-- =========== ENUM CONSTANT SUMMARY =========== -->
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 135 <li class="blockList"><a name="enum.constant.summary">
 136 <!--   -->
 137 </a>
 138 <h3>Enum Constant Summary</h3>
 139 <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Enum Constant Summary table, listing enum constants, and an explanation">
 140 <caption><span>Enum Constants</span><span class="tabEnd">&nbsp;</span></caption>
 141 <tr>
 142 <th class="colOne" scope="col">Enum Constant and Description</th>
 143 </tr>
 144 <tr class="altColor">
 145 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#alignment">alignment</a></span></code>&nbsp;</td>
 146 </tr>
 147 <tr class="rowColor">
 148 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#centStruct">centStruct</a></span></code>&nbsp;</td>
 149 </tr>
 150 <tr class="altColor">
 151 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#ensembleFreq">ensembleFreq</a></span></code>&nbsp;</td>
 152 </tr>
 153 <tr class="rowColor">
 154 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#freeEnergy">freeEnergy</a></span></code>&nbsp;</td>
 155 </tr>
 156 <tr class="altColor">
 157 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#justStruct">justStruct</a></span></code>&nbsp;</td>
 158 </tr>
 159 <tr class="rowColor">
 160 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#MEAStruct">MEAStruct</a></span></code>&nbsp;</td>
 161 </tr>
 162 <tr class="altColor">
 163 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#mfeStruct">mfeStruct</a></span></code>&nbsp;</td>
 164 </tr>
 165 <tr class="rowColor">
 166 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#OTHER">OTHER</a></span></code>&nbsp;</td>
 167 </tr>
 168 <tr class="altColor">
 169 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#PStruct">PStruct</a></span></code>&nbsp;</td>
 170 </tr>
 171 <tr class="rowColor">
 172 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#stochBTStruct">stochBTStruct</a></span></code>&nbsp;</td>
 173 </tr>
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 190 <td class="colFirst"><code>(package private) java.lang.String</code></td>
 191 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#regex">regex</a></span></code>&nbsp;</td>
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 204 <tr>
 205 <th class="colFirst" scope="col">Modifier and Type</th>
 206 <th class="colLast" scope="col">Method and Description</th>
 207 </tr>
 208 <tr id="i0" class="altColor">
 209 <td class="colFirst"><code>static <a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a></code></td>
 210 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#valueOf-java.lang.String-">valueOf</a></span>(java.lang.String&nbsp;name)</code>
 211 <div class="block">Returns the enum constant of this type with the specified name.</div>
 212 </td>
 213 </tr>
 214 <tr id="i1" class="rowColor">
 215 <td class="colFirst"><code>static <a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a>[]</code></td>
 216 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html#values--">values</a></span>()</code>
 217 <div class="block">Returns an array containing the constants of this enum type, in
 218 the order they are declared.</div>
 219 </td>
 220 </tr>
 221 </table>
 222 <ul class="blockList">
 223 <li class="blockList"><a name="methods.inherited.from.class.java.lang.Enum">
 224 <!--   -->
 225 </a>
 226 <h3>Methods inherited from class&nbsp;java.lang.Enum</h3>
 227 <code>clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf</code></li>
 228 </ul>
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 231 <!--   -->
 232 </a>
 233 <h3>Methods inherited from class&nbsp;java.lang.Object</h3>
 234 <code>getClass, notify, notifyAll, wait, wait, wait</code></li>
 235 </ul>
 236 </li>
 237 </ul>
 238 </li>
 239 </ul>
 240 </div>
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 244 <!-- ============ ENUM CONSTANT DETAIL =========== -->
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 246 <li class="blockList"><a name="enum.constant.detail">
 247 <!--   -->
 248 </a>
 249 <h3>Enum Constant Detail</h3>
 250 <a name="mfeStruct">
 251 <!--   -->
 252 </a>
 253 <ul class="blockList">
 254 <li class="blockList">
 255 <h4>mfeStruct</h4>
 256 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> mfeStruct</pre>
 257 </li>
 258 </ul>
 259 <a name="justStruct">
 260 <!--   -->
 261 </a>
 262 <ul class="blockList">
 263 <li class="blockList">
 264 <h4>justStruct</h4>
 265 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> justStruct</pre>
 266 </li>
 267 </ul>
 268 <a name="stochBTStruct">
 269 <!--   -->
 270 </a>
 271 <ul class="blockList">
 272 <li class="blockList">
 273 <h4>stochBTStruct</h4>
 274 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> stochBTStruct</pre>
 275 </li>
 276 </ul>
 277 <a name="PStruct">
 278 <!--   -->
 279 </a>
 280 <ul class="blockList">
 281 <li class="blockList">
 282 <h4>PStruct</h4>
 283 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> PStruct</pre>
 284 </li>
 285 </ul>
 286 <a name="centStruct">
 287 <!--   -->
 288 </a>
 289 <ul class="blockList">
 290 <li class="blockList">
 291 <h4>centStruct</h4>
 292 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> centStruct</pre>
 293 </li>
 294 </ul>
 295 <a name="MEAStruct">
 296 <!--   -->
 297 </a>
 298 <ul class="blockList">
 299 <li class="blockList">
 300 <h4>MEAStruct</h4>
 301 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> MEAStruct</pre>
 302 </li>
 303 </ul>
 304 <a name="freeEnergy">
 305 <!--   -->
 306 </a>
 307 <ul class="blockList">
 308 <li class="blockList">
 309 <h4>freeEnergy</h4>
 310 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> freeEnergy</pre>
 311 </li>
 312 </ul>
 313 <a name="ensembleFreq">
 314 <!--   -->
 315 </a>
 316 <ul class="blockList">
 317 <li class="blockList">
 318 <h4>ensembleFreq</h4>
 319 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> ensembleFreq</pre>
 320 </li>
 321 </ul>
 322 <a name="alignment">
 323 <!--   -->
 324 </a>
 325 <ul class="blockList">
 326 <li class="blockList">
 327 <h4>alignment</h4>
 328 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> alignment</pre>
 329 </li>
 330 </ul>
 331 <a name="OTHER">
 332 <!--   -->
 333 </a>
 334 <ul class="blockListLast">
 335 <li class="blockList">
 336 <h4>OTHER</h4>
 337 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a> OTHER</pre>
 338 </li>
 339 </ul>
 340 </li>
 341 </ul>
 342 <!-- ============ FIELD DETAIL =========== -->
 343 <ul class="blockList">
 344 <li class="blockList"><a name="field.detail">
 345 <!--   -->
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 347 <h3>Field Detail</h3>
 348 <a name="regex">
 349 <!--   -->
 350 </a>
 351 <ul class="blockListLast">
 352 <li class="blockList">
 353 <h4>regex</h4>
 354 <pre>java.lang.String regex</pre>
 355 </li>
 356 </ul>
 357 </li>
 358 </ul>
 359 <!-- ============ METHOD DETAIL ========== -->
 360 <ul class="blockList">
 361 <li class="blockList"><a name="method.detail">
 362 <!--   -->
 363 </a>
 364 <h3>Method Detail</h3>
 365 <a name="values--">
 366 <!--   -->
 367 </a>
 368 <ul class="blockList">
 369 <li class="blockList">
 370 <h4>values</h4>
 371 <pre>public static&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a>[]&nbsp;values()</pre>
 372 <div class="block">Returns an array containing the constants of this enum type, in
 373 the order they are declared.  This method may be used to iterate
 374 over the constants as follows:
 375 <pre>
 376 for (RNAStructReader.AlifoldLine c : RNAStructReader.AlifoldLine.values())
 377 &nbsp;   System.out.println(c);
 378 </pre></div>
 379 <dl>
 380 <dt><span class="returnLabel">Returns:</span></dt>
 381 <dd>an array containing the constants of this enum type, in the order they are declared</dd>
 382 </dl>
 383 </li>
 384 </ul>
 385 <a name="valueOf-java.lang.String-">
 386 <!--   -->
 387 </a>
 388 <ul class="blockListLast">
 389 <li class="blockList">
 390 <h4>valueOf</h4>
 391 <pre>public static&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a>&nbsp;valueOf(java.lang.String&nbsp;name)</pre>
 392 <div class="block">Returns the enum constant of this type with the specified name.
 393 The string must match <i>exactly</i> an identifier used to declare an
 394 enum constant in this type.  (Extraneous whitespace characters are
 395 not permitted.)</div>
 396 <dl>
 397 <dt><span class="paramLabel">Parameters:</span></dt>
 398 <dd><code>name</code> - the name of the enum constant to be returned.</dd>
 399 <dt><span class="returnLabel">Returns:</span></dt>
 400 <dd>the enum constant with the specified name</dd>
 401 <dt><span class="throwsLabel">Throws:</span></dt>
 402 <dd><code>java.lang.IllegalArgumentException</code> - if this enum type has no constant with the specified name</dd>
 403 <dd><code>java.lang.NullPointerException</code> - if the argument is null</dd>
 404 </dl>
 405 </li>
 406 </ul>
 407 </li>
 408 </ul>
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 424 <li><a href="package-summary.html">Package</a></li>
 425 <li class="navBarCell1Rev">Class</li>
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 473 <!--   -->
 474 </a></div>
 475 <!-- ======== END OF BOTTOM NAVBAR ======= -->
 476 </body>
 477 </html>