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  95 <div class="subTitle">compbio.data.sequence</div>
  96 <h2 title="Enum RNAStructReader.AlifoldResult" class="title">Enum RNAStructReader.AlifoldResult</h2>
  97 </div>
  98 <div class="contentContainer">
  99 <ul class="inheritance">
 100 <li>java.lang.Object</li>
 101 <li>
 102 <ul class="inheritance">
 103 <li>java.lang.Enum&lt;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a>&gt;</li>
 104 <li>
 105 <ul class="inheritance">
 106 <li>compbio.data.sequence.RNAStructReader.AlifoldResult</li>
 107 </ul>
 108 </li>
 109 </ul>
 110 </li>
 111 </ul>
 112 <div class="description">
 113 <ul class="blockList">
 114 <li class="blockList">
 115 <dl>
 116 <dt>All Implemented Interfaces:</dt>
 117 <dd>java.io.Serializable, java.lang.Comparable&lt;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a>&gt;</dd>
 118 </dl>
 119 <dl>
 120 <dt>Enclosing class:</dt>
 121 <dd><a href="../../../compbio/data/sequence/RNAStructReader.html" title="class in compbio.data.sequence">RNAStructReader</a></dd>
 122 </dl>
 123 <hr>
 124 <br>
 125 <pre>public static enum <span class="typeNameLabel">RNAStructReader.AlifoldResult</span>
 126 extends java.lang.Enum&lt;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a>&gt;</pre>
 127 </li>
 128 </ul>
 129 </div>
 130 <div class="summary">
 131 <ul class="blockList">
 132 <li class="blockList">
 133 <!-- =========== ENUM CONSTANT SUMMARY =========== -->
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 136 <!--   -->
 137 </a>
 138 <h3>Enum Constant Summary</h3>
 139 <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Enum Constant Summary table, listing enum constants, and an explanation">
 140 <caption><span>Enum Constants</span><span class="tabEnd">&nbsp;</span></caption>
 141 <tr>
 142 <th class="colOne" scope="col">Enum Constant and Description</th>
 143 </tr>
 144 <tr class="altColor">
 145 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#centroidStructure">centroidStructure</a></span></code>&nbsp;</td>
 146 </tr>
 147 <tr class="rowColor">
 148 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#consensusAlignment">consensusAlignment</a></span></code>&nbsp;</td>
 149 </tr>
 150 <tr class="altColor">
 151 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#contactProbabilities">contactProbabilities</a></span></code>&nbsp;</td>
 152 </tr>
 153 <tr class="rowColor">
 154 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#contactProbabilityStructure">contactProbabilityStructure</a></span></code>&nbsp;</td>
 155 </tr>
 156 <tr class="altColor">
 157 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#ensembleValues">ensembleValues</a></span></code>&nbsp;</td>
 158 </tr>
 159 <tr class="rowColor">
 160 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#MEAStucture">MEAStucture</a></span></code>&nbsp;</td>
 161 </tr>
 162 <tr class="altColor">
 163 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#mfeStructure">mfeStructure</a></span></code>&nbsp;</td>
 164 </tr>
 165 <tr class="rowColor">
 166 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#stochBTStructure">stochBTStructure</a></span></code>&nbsp;</td>
 167 </tr>
 168 </table>
 169 </li>
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 178 <caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd">&nbsp;</span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd">&nbsp;</span></span></caption>
 179 <tr>
 180 <th class="colFirst" scope="col">Modifier and Type</th>
 181 <th class="colLast" scope="col">Method and Description</th>
 182 </tr>
 183 <tr id="i0" class="altColor">
 184 <td class="colFirst"><code>static <a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a></code></td>
 185 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#valueOf-java.lang.String-">valueOf</a></span>(java.lang.String&nbsp;name)</code>
 186 <div class="block">Returns the enum constant of this type with the specified name.</div>
 187 </td>
 188 </tr>
 189 <tr id="i1" class="rowColor">
 190 <td class="colFirst"><code>static <a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a>[]</code></td>
 191 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html#values--">values</a></span>()</code>
 192 <div class="block">Returns an array containing the constants of this enum type, in
 193 the order they are declared.</div>
 194 </td>
 195 </tr>
 196 </table>
 197 <ul class="blockList">
 198 <li class="blockList"><a name="methods.inherited.from.class.java.lang.Enum">
 199 <!--   -->
 200 </a>
 201 <h3>Methods inherited from class&nbsp;java.lang.Enum</h3>
 202 <code>clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf</code></li>
 203 </ul>
 204 <ul class="blockList">
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 206 <!--   -->
 207 </a>
 208 <h3>Methods inherited from class&nbsp;java.lang.Object</h3>
 209 <code>getClass, notify, notifyAll, wait, wait, wait</code></li>
 210 </ul>
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 212 </ul>
 213 </li>
 214 </ul>
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 219 <!-- ============ ENUM CONSTANT DETAIL =========== -->
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 221 <li class="blockList"><a name="enum.constant.detail">
 222 <!--   -->
 223 </a>
 224 <h3>Enum Constant Detail</h3>
 225 <a name="mfeStructure">
 226 <!--   -->
 227 </a>
 228 <ul class="blockList">
 229 <li class="blockList">
 230 <h4>mfeStructure</h4>
 231 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> mfeStructure</pre>
 232 </li>
 233 </ul>
 234 <a name="contactProbabilityStructure">
 235 <!--   -->
 236 </a>
 237 <ul class="blockList">
 238 <li class="blockList">
 239 <h4>contactProbabilityStructure</h4>
 240 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> contactProbabilityStructure</pre>
 241 </li>
 242 </ul>
 243 <a name="MEAStucture">
 244 <!--   -->
 245 </a>
 246 <ul class="blockList">
 247 <li class="blockList">
 248 <h4>MEAStucture</h4>
 249 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> MEAStucture</pre>
 250 </li>
 251 </ul>
 252 <a name="centroidStructure">
 253 <!--   -->
 254 </a>
 255 <ul class="blockList">
 256 <li class="blockList">
 257 <h4>centroidStructure</h4>
 258 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> centroidStructure</pre>
 259 </li>
 260 </ul>
 261 <a name="stochBTStructure">
 262 <!--   -->
 263 </a>
 264 <ul class="blockList">
 265 <li class="blockList">
 266 <h4>stochBTStructure</h4>
 267 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> stochBTStructure</pre>
 268 </li>
 269 </ul>
 270 <a name="consensusAlignment">
 271 <!--   -->
 272 </a>
 273 <ul class="blockList">
 274 <li class="blockList">
 275 <h4>consensusAlignment</h4>
 276 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> consensusAlignment</pre>
 277 </li>
 278 </ul>
 279 <a name="ensembleValues">
 280 <!--   -->
 281 </a>
 282 <ul class="blockList">
 283 <li class="blockList">
 284 <h4>ensembleValues</h4>
 285 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> ensembleValues</pre>
 286 </li>
 287 </ul>
 288 <a name="contactProbabilities">
 289 <!--   -->
 290 </a>
 291 <ul class="blockListLast">
 292 <li class="blockList">
 293 <h4>contactProbabilities</h4>
 294 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a> contactProbabilities</pre>
 295 </li>
 296 </ul>
 297 </li>
 298 </ul>
 299 <!-- ============ METHOD DETAIL ========== -->
 300 <ul class="blockList">
 301 <li class="blockList"><a name="method.detail">
 302 <!--   -->
 303 </a>
 304 <h3>Method Detail</h3>
 305 <a name="values--">
 306 <!--   -->
 307 </a>
 308 <ul class="blockList">
 309 <li class="blockList">
 310 <h4>values</h4>
 311 <pre>public static&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a>[]&nbsp;values()</pre>
 312 <div class="block">Returns an array containing the constants of this enum type, in
 313 the order they are declared.  This method may be used to iterate
 314 over the constants as follows:
 315 <pre>
 316 for (RNAStructReader.AlifoldResult c : RNAStructReader.AlifoldResult.values())
 317 &nbsp;   System.out.println(c);
 318 </pre></div>
 319 <dl>
 320 <dt><span class="returnLabel">Returns:</span></dt>
 321 <dd>an array containing the constants of this enum type, in the order they are declared</dd>
 322 </dl>
 323 </li>
 324 </ul>
 325 <a name="valueOf-java.lang.String-">
 326 <!--   -->
 327 </a>
 328 <ul class="blockListLast">
 329 <li class="blockList">
 330 <h4>valueOf</h4>
 331 <pre>public static&nbsp;<a href="../../../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a>&nbsp;valueOf(java.lang.String&nbsp;name)</pre>
 332 <div class="block">Returns the enum constant of this type with the specified name.
 333 The string must match <i>exactly</i> an identifier used to declare an
 334 enum constant in this type.  (Extraneous whitespace characters are
 335 not permitted.)</div>
 336 <dl>
 337 <dt><span class="paramLabel">Parameters:</span></dt>
 338 <dd><code>name</code> - the name of the enum constant to be returned.</dd>
 339 <dt><span class="returnLabel">Returns:</span></dt>
 340 <dd>the enum constant with the specified name</dd>
 341 <dt><span class="throwsLabel">Throws:</span></dt>
 342 <dd><code>java.lang.IllegalArgumentException</code> - if this enum type has no constant with the specified name</dd>
 343 <dd><code>java.lang.NullPointerException</code> - if the argument is null</dd>
 344 </dl>
 345 </li>
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