JWS-109 & JWS-116 Regenerated the JABAWS JavaDoc (with eclipse java 8) and moved...
[jabaws.git] / website / docs / dm_javadoc / compbio / data / sequence / class-use / IUPredResult.html
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
2 <!-- NewPage -->
3 <html lang="en">
4 <head>
5 <!-- Generated by javadoc (1.8.0_121) on Fri Apr 21 15:31:59 BST 2017 -->
6 <title>Uses of Class compbio.data.sequence.IUPredResult</title>
7 <meta name="date" content="2017-04-21">
8 <link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
9 <script type="text/javascript" src="../../../../script.js"></script>
10 </head>
11 <body>
12 <script type="text/javascript"><!--
13     try {
14         if (location.href.indexOf('is-external=true') == -1) {
15             parent.document.title="Uses of Class compbio.data.sequence.IUPredResult";
16         }
17     }
18     catch(err) {
19     }
20 //-->
21 </script>
22 <noscript>
23 <div>JavaScript is disabled on your browser.</div>
24 </noscript>
25 <!-- ========= START OF TOP NAVBAR ======= -->
26 <div class="topNav"><a name="navbar.top">
27 <!--   -->
28 </a>
29 <div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
30 <a name="navbar.top.firstrow">
31 <!--   -->
32 </a>
33 <ul class="navList" title="Navigation">
34 <li><a href="../../../../overview-summary.html">Overview</a></li>
35 <li><a href="../package-summary.html">Package</a></li>
36 <li><a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">Class</a></li>
37 <li class="navBarCell1Rev">Use</li>
38 <li><a href="../../../../overview-tree.html">Tree</a></li>
39 <li><a href="../../../../deprecated-list.html">Deprecated</a></li>
40 <li><a href="../../../../index-files/index-1.html">Index</a></li>
41 <li><a href="../../../../help-doc.html">Help</a></li>
42 </ul>
43 </div>
44 <div class="subNav">
45 <ul class="navList">
46 <li>Prev</li>
47 <li>Next</li>
48 </ul>
49 <ul class="navList">
50 <li><a href="../../../../index.html?compbio/data/sequence/class-use/IUPredResult.html" target="_top">Frames</a></li>
51 <li><a href="IUPredResult.html" target="_top">No&nbsp;Frames</a></li>
52 </ul>
53 <ul class="navList" id="allclasses_navbar_top">
54 <li><a href="../../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
55 </ul>
56 <div>
57 <script type="text/javascript"><!--
58   allClassesLink = document.getElementById("allclasses_navbar_top");
59   if(window==top) {
60     allClassesLink.style.display = "block";
61   }
62   else {
63     allClassesLink.style.display = "none";
64   }
65   //-->
66 </script>
67 </div>
68 <a name="skip.navbar.top">
69 <!--   -->
70 </a></div>
71 <!-- ========= END OF TOP NAVBAR ========= -->
72 <div class="header">
73 <h2 title="Uses of Class compbio.data.sequence.IUPredResult" class="title">Uses of Class<br>compbio.data.sequence.IUPredResult</h2>
74 </div>
75 <div class="classUseContainer">
76 <ul class="blockList">
77 <li class="blockList">
78 <table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
79 <caption><span>Packages that use <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></span><span class="tabEnd">&nbsp;</span></caption>
80 <tr>
81 <th class="colFirst" scope="col">Package</th>
82 <th class="colLast" scope="col">Description</th>
83 </tr>
84 <tbody>
85 <tr class="altColor">
86 <td class="colFirst"><a href="#compbio.data.sequence">compbio.data.sequence</a></td>
87 <td class="colLast">
88 <div class="block">A data model for multiple sequence alignment web services and utility methods
89  that work on the objects of this model.</div>
90 </td>
91 </tr>
92 </tbody>
93 </table>
94 </li>
95 <li class="blockList">
96 <ul class="blockList">
97 <li class="blockList"><a name="compbio.data.sequence">
98 <!--   -->
99 </a>
100 <h3>Uses of <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a> in <a href="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</a></h3>
101 <table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
102 <caption><span>Methods in <a href="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</a> that return <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></span><span class="tabEnd">&nbsp;</span></caption>
103 <tr>
104 <th class="colFirst" scope="col">Modifier and Type</th>
105 <th class="colLast" scope="col">Method and Description</th>
106 </tr>
107 <tbody>
108 <tr class="altColor">
109 <td class="colFirst"><code>(package private) static <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></code></td>
110 <td class="colLast"><span class="typeNameLabel">IUPredResult.</span><code><span class="memberNameLink"><a href="../../../../compbio/data/sequence/IUPredResult.html#getType-java.io.File-">getType</a></span>(java.io.File&nbsp;file)</code>&nbsp;</td>
111 </tr>
112 <tr class="rowColor">
113 <td class="colFirst"><code>static <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></code></td>
114 <td class="colLast"><span class="typeNameLabel">IUPredResult.</span><code><span class="memberNameLink"><a href="../../../../compbio/data/sequence/IUPredResult.html#valueOf-java.lang.String-">valueOf</a></span>(java.lang.String&nbsp;name)</code>
115 <div class="block">Returns the enum constant of this type with the specified name.</div>
116 </td>
117 </tr>
118 <tr class="altColor">
119 <td class="colFirst"><code>static <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a>[]</code></td>
120 <td class="colLast"><span class="typeNameLabel">IUPredResult.</span><code><span class="memberNameLink"><a href="../../../../compbio/data/sequence/IUPredResult.html#values--">values</a></span>()</code>
121 <div class="block">Returns an array containing the constants of this enum type, in
122 the order they are declared.</div>
123 </td>
124 </tr>
125 </tbody>
126 </table>
127 <table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
128 <caption><span>Methods in <a href="../../../../compbio/data/sequence/package-summary.html">compbio.data.sequence</a> with parameters of type <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></span><span class="tabEnd">&nbsp;</span></caption>
129 <tr>
130 <th class="colFirst" scope="col">Modifier and Type</th>
131 <th class="colLast" scope="col">Method and Description</th>
132 </tr>
133 <tbody>
134 <tr class="altColor">
135 <td class="colFirst"><code>private static java.util.Map&lt;java.lang.String,<a href="../../../../compbio/data/sequence/Score.html" title="class in compbio.data.sequence">Score</a>&gt;</code></td>
136 <td class="colLast"><span class="typeNameLabel">SequenceUtil.</span><code><span class="memberNameLink"><a href="../../../../compbio/data/sequence/SequenceUtil.html#readIUPred-java.io.InputStream-compbio.data.sequence.IUPredResult-">readIUPred</a></span>(java.io.InputStream&nbsp;input,
137           <a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a>&nbsp;type)</code>
138 <div class="block">## Long Disorder
139  
140  # P53_HUMAN
141  
142  1 M 0.9943
143  
144  2 E 0.9917
145  
146  3 E 0.9879
147  
148  (every line)</div>
149 </td>
150 </tr>
151 </tbody>
152 </table>
153 </li>
154 </ul>
155 </li>
156 </ul>
157 </div>
158 <!-- ======= START OF BOTTOM NAVBAR ====== -->
159 <div class="bottomNav"><a name="navbar.bottom">
160 <!--   -->
161 </a>
162 <div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
163 <a name="navbar.bottom.firstrow">
164 <!--   -->
165 </a>
166 <ul class="navList" title="Navigation">
167 <li><a href="../../../../overview-summary.html">Overview</a></li>
168 <li><a href="../package-summary.html">Package</a></li>
169 <li><a href="../../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">Class</a></li>
170 <li class="navBarCell1Rev">Use</li>
171 <li><a href="../../../../overview-tree.html">Tree</a></li>
172 <li><a href="../../../../deprecated-list.html">Deprecated</a></li>
173 <li><a href="../../../../index-files/index-1.html">Index</a></li>
174 <li><a href="../../../../help-doc.html">Help</a></li>
175 </ul>
176 </div>
177 <div class="subNav">
178 <ul class="navList">
179 <li>Prev</li>
180 <li>Next</li>
181 </ul>
182 <ul class="navList">
183 <li><a href="../../../../index.html?compbio/data/sequence/class-use/IUPredResult.html" target="_top">Frames</a></li>
184 <li><a href="IUPredResult.html" target="_top">No&nbsp;Frames</a></li>
185 </ul>
186 <ul class="navList" id="allclasses_navbar_bottom">
187 <li><a href="../../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
188 </ul>
189 <div>
190 <script type="text/javascript"><!--
191   allClassesLink = document.getElementById("allclasses_navbar_bottom");
192   if(window==top) {
193     allClassesLink.style.display = "block";
194   }
195   else {
196     allClassesLink.style.display = "none";
197   }
198   //-->
199 </script>
200 </div>
201 <a name="skip.navbar.bottom">
202 <!--   -->
203 </a></div>
204 <!-- ======== END OF BOTTOM NAVBAR ======= -->
205 </body>
206 </html>