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  75 <h2 class="title">L</h2>
  76 <dl>
  77 <dt><a href="../compbio/metadata/Limit.html" title="class in compbio.metadata"><span class="typeNameLink">Limit</span></a>&lt;<a href="../compbio/metadata/Limit.html" title="type parameter in Limit">T</a>&gt; - Class in <a href="../compbio/metadata/package-summary.html">compbio.metadata</a></dt>
  78 <dd>
  79 <div class="block">A value object containing a maximum number of sequences and a maximum average
  80  sequence length for a preset.</div>
  81 </dd>
  82 <dt><span class="memberNameLink"><a href="../compbio/metadata/Limit.html#Limit--">Limit()</a></span> - Constructor for class compbio.metadata.<a href="../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</a></dt>
  83 <dd>&nbsp;</dd>
  84 <dt><span class="memberNameLink"><a href="../compbio/metadata/Limit.html#Limit-int-int-java.lang.String-">Limit(int, int, String)</a></span> - Constructor for class compbio.metadata.<a href="../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</a></dt>
  85 <dd>
  86 <div class="block">Instantiate the limit</div>
  87 </dd>
  88 <dt><span class="memberNameLink"><a href="../compbio/metadata/Limit.html#Limit-int-int-java.lang.String-boolean-">Limit(int, int, String, boolean)</a></span> - Constructor for class compbio.metadata.<a href="../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</a></dt>
  89 <dd>&nbsp;</dd>
  90 <dt><span class="memberNameLink"><a href="../compbio/metadata/LimitsManager.html#limit">limit</a></span> - Variable in class compbio.metadata.<a href="../compbio/metadata/LimitsManager.html" title="class in compbio.metadata">LimitsManager</a></dt>
  91 <dd>&nbsp;</dd>
  92 <dt><a href="../compbio/metadata/LimitExceededException.html" title="class in compbio.metadata"><span class="typeNameLink">LimitExceededException</span></a> - Exception in <a href="../compbio/metadata/package-summary.html">compbio.metadata</a></dt>
  93 <dd>
  94 <div class="block">This exception is thrown if the task larger in size that the limit that
  95  applies to the calculation.</div>
  96 </dd>
  97 <dt><span class="memberNameLink"><a href="../compbio/metadata/LimitExceededException.html#LimitExceededException-java.lang.String-">LimitExceededException(String)</a></span> - Constructor for exception compbio.metadata.<a href="../compbio/metadata/LimitExceededException.html" title="class in compbio.metadata">LimitExceededException</a></dt>
  98 <dd>&nbsp;</dd>
  99 <dt><a href="../compbio/metadata/LimitsManager.html" title="class in compbio.metadata"><span class="typeNameLink">LimitsManager</span></a>&lt;<a href="../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</a>&gt; - Class in <a href="../compbio/metadata/package-summary.html">compbio.metadata</a></dt>
 100 <dd>
 101 <div class="block">A collection of Limits</div>
 102 </dd>
 103 <dt><span class="memberNameLink"><a href="../compbio/metadata/LimitsManager.html#LimitsManager--">LimitsManager()</a></span> - Constructor for class compbio.metadata.<a href="../compbio/metadata/LimitsManager.html" title="class in compbio.metadata">LimitsManager</a></dt>
 104 <dd>&nbsp;</dd>
 105 <dt><span class="memberNameLink"><a href="../compbio/metadata/PresetManager.html#LOCAL_ENGINE_LIMIT_PRESET">LOCAL_ENGINE_LIMIT_PRESET</a></span> - Static variable in class compbio.metadata.<a href="../compbio/metadata/PresetManager.html" title="class in compbio.metadata">PresetManager</a></dt>
 106 <dd>&nbsp;</dd>
 107 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/ClustalAlignmentUtil.html#log">log</a></span> - Static variable in class compbio.data.sequence.<a href="../compbio/data/sequence/ClustalAlignmentUtil.html" title="class in compbio.data.sequence">ClustalAlignmentUtil</a></dt>
 108 <dd>&nbsp;</dd>
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