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  75 <h2 class="title">V</h2>
  76 <dl>
  77 <dt><span class="memberNameLink"><a href="../compbio/metadata/Limit.html#validate--">validate()</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</a></dt>
  78 <dd>&nbsp;</dd>
  79 <dt><span class="memberNameLink"><a href="../compbio/metadata/LimitsManager.html#validate-compbio.metadata.PresetManager-">validate(PresetManager&lt;T&gt;)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/LimitsManager.html" title="class in compbio.metadata">LimitsManager</a></dt>
  80 <dd>
  81 <div class="block">Validate Limits</div>
  82 </dd>
  83 <dt><span class="memberNameLink"><a href="../compbio/metadata/Option.html#validate--">validate()</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Option.html" title="class in compbio.metadata">Option</a></dt>
  84 <dd>
  85 <div class="block">Validate the option</div>
  86 </dd>
  87 <dt><span class="memberNameLink"><a href="../compbio/metadata/Parameter.html#validate--">validate()</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Parameter.html" title="class in compbio.metadata">Parameter</a></dt>
  88 <dd>&nbsp;</dd>
  89 <dt><span class="memberNameLink"><a href="../compbio/metadata/PresetManager.html#validate-compbio.metadata.RunnerConfig-">validate(RunnerConfig&lt;T&gt;)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/PresetManager.html" title="class in compbio.metadata">PresetManager</a></dt>
  90 <dd>
  91 <div class="block">Checks whether preset option and parameter are defined in RunnerConfig
  92  object.</div>
  93 </dd>
  94 <dt><span class="memberNameLink"><a href="../compbio/metadata/RunnerConfig.html#validate--">validate()</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/RunnerConfig.html" title="class in compbio.metadata">RunnerConfig</a></dt>
  95 <dd>
  96 <div class="block">Validate the value of the argument.</div>
  97 </dd>
  98 <dt><span class="memberNameLink"><a href="../compbio/metadata/ValueConstrain.html#validate--">validate()</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata">ValueConstrain</a></dt>
  99 <dd>
 100 <div class="block">Validate the ValueConstrain object.</div>
 101 </dd>
 102 <dt><span class="memberNameLink"><a href="../compbio/metadata/Parameter.html#validValue">validValue</a></span> - Variable in class compbio.metadata.<a href="../compbio/metadata/Parameter.html" title="class in compbio.metadata">Parameter</a></dt>
 103 <dd>&nbsp;</dd>
 104 <dt><a href="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata"><span class="typeNameLink">ValueConstrain</span></a> - Class in <a href="../compbio/metadata/package-summary.html">compbio.metadata</a></dt>
 105 <dd>
 106 <div class="block">The type and the lower and upper boundaries for numerical value.</div>
 107 </dd>
 108 <dt><span class="memberNameLink"><a href="../compbio/metadata/ValueConstrain.html#ValueConstrain--">ValueConstrain()</a></span> - Constructor for class compbio.metadata.<a href="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata">ValueConstrain</a></dt>
 109 <dd>&nbsp;</dd>
 110 <dt><a href="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata"><span class="typeNameLink">ValueConstrain.Type</span></a> - Enum in <a href="../compbio/metadata/package-summary.html">compbio.metadata</a></dt>
 111 <dd>&nbsp;</dd>
 112 <dt><span class="memberNameLink"><a href="../compbio/metadata/Option.html#valueExist-java.lang.String-java.util.List-">valueExist(String, List&lt;String&gt;)</a></span> - Static method in class compbio.metadata.<a href="../compbio/metadata/Option.html" title="class in compbio.metadata">Option</a></dt>
 113 <dd>&nbsp;</dd>
 114 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/ConservationMethod.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/ConservationMethod.html" title="enum in compbio.data.sequence">ConservationMethod</a></dt>
 115 <dd>
 116 <div class="block">Returns the enum constant of this type with the specified name.</div>
 117 </dd>
 118 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/DisemblResult.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/DisemblResult.html" title="enum in compbio.data.sequence">DisemblResult</a></dt>
 119 <dd>
 120 <div class="block">Returns the enum constant of this type with the specified name.</div>
 121 </dd>
 122 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/DisorderMethod.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/DisorderMethod.html" title="enum in compbio.data.sequence">DisorderMethod</a></dt>
 123 <dd>
 124 <div class="block">Returns the enum constant of this type with the specified name.</div>
 125 </dd>
 126 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/GlobProtResult.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a></dt>
 127 <dd>
 128 <div class="block">Returns the enum constant of this type with the specified name.</div>
 129 </dd>
 130 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/IUPredResult.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></dt>
 131 <dd>
 132 <div class="block">Returns the enum constant of this type with the specified name.</div>
 133 </dd>
 134 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/Program.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/Program.html" title="enum in compbio.data.sequence">Program</a></dt>
 135 <dd>
 136 <div class="block">Returns the enum constant of this type with the specified name.</div>
 137 </dd>
 138 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.AlifoldLine.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a></dt>
 139 <dd>
 140 <div class="block">Returns the enum constant of this type with the specified name.</div>
 141 </dd>
 142 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.AlifoldResult.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a></dt>
 143 <dd>
 144 <div class="block">Returns the enum constant of this type with the specified name.</div>
 145 </dd>
 146 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.RNAOut.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.RNAOut.html" title="enum in compbio.data.sequence">RNAStructReader.RNAOut</a></dt>
 147 <dd>
 148 <div class="block">Returns the enum constant of this type with the specified name.</div>
 149 </dd>
 150 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/SMERFSConstraints.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/SMERFSConstraints.html" title="enum in compbio.data.sequence">SMERFSConstraints</a></dt>
 151 <dd>
 152 <div class="block">Returns the enum constant of this type with the specified name.</div>
 153 </dd>
 154 <dt><span class="memberNameLink"><a href="../compbio/metadata/JobStatus.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.metadata.<a href="../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</a></dt>
 155 <dd>
 156 <div class="block">Returns the enum constant of this type with the specified name.</div>
 157 </dd>
 158 <dt><span class="memberNameLink"><a href="../compbio/metadata/ValueConstrain.Type.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum compbio.metadata.<a href="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata">ValueConstrain.Type</a></dt>
 159 <dd>
 160 <div class="block">Returns the enum constant of this type with the specified name.</div>
 161 </dd>
 162 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/ConservationMethod.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/ConservationMethod.html" title="enum in compbio.data.sequence">ConservationMethod</a></dt>
 163 <dd>
 164 <div class="block">Returns an array containing the constants of this enum type, in
 165 the order they are declared.</div>
 166 </dd>
 167 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/DisemblResult.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/DisemblResult.html" title="enum in compbio.data.sequence">DisemblResult</a></dt>
 168 <dd>
 169 <div class="block">Returns an array containing the constants of this enum type, in
 170 the order they are declared.</div>
 171 </dd>
 172 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/DisorderMethod.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/DisorderMethod.html" title="enum in compbio.data.sequence">DisorderMethod</a></dt>
 173 <dd>
 174 <div class="block">Returns an array containing the constants of this enum type, in
 175 the order they are declared.</div>
 176 </dd>
 177 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/GlobProtResult.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a></dt>
 178 <dd>
 179 <div class="block">Returns an array containing the constants of this enum type, in
 180 the order they are declared.</div>
 181 </dd>
 182 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/IUPredResult.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence">IUPredResult</a></dt>
 183 <dd>
 184 <div class="block">Returns an array containing the constants of this enum type, in
 185 the order they are declared.</div>
 186 </dd>
 187 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/Program.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/Program.html" title="enum in compbio.data.sequence">Program</a></dt>
 188 <dd>
 189 <div class="block">Returns an array containing the constants of this enum type, in
 190 the order they are declared.</div>
 191 </dd>
 192 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.AlifoldLine.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldLine</a></dt>
 193 <dd>
 194 <div class="block">Returns an array containing the constants of this enum type, in
 195 the order they are declared.</div>
 196 </dd>
 197 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.AlifoldResult.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence">RNAStructReader.AlifoldResult</a></dt>
 198 <dd>
 199 <div class="block">Returns an array containing the constants of this enum type, in
 200 the order they are declared.</div>
 201 </dd>
 202 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.RNAOut.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.RNAOut.html" title="enum in compbio.data.sequence">RNAStructReader.RNAOut</a></dt>
 203 <dd>
 204 <div class="block">Returns an array containing the constants of this enum type, in
 205 the order they are declared.</div>
 206 </dd>
 207 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/SMERFSConstraints.html#values--">values()</a></span> - Static method in enum compbio.data.sequence.<a href="../compbio/data/sequence/SMERFSConstraints.html" title="enum in compbio.data.sequence">SMERFSConstraints</a></dt>
 208 <dd>
 209 <div class="block">Returns an array containing the constants of this enum type, in
 210 the order they are declared.</div>
 211 </dd>
 212 <dt><span class="memberNameLink"><a href="../compbio/metadata/JobStatus.html#values--">values()</a></span> - Static method in enum compbio.metadata.<a href="../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</a></dt>
 213 <dd>
 214 <div class="block">Returns an array containing the constants of this enum type, in
 215 the order they are declared.</div>
 216 </dd>
 217 <dt><span class="memberNameLink"><a href="../compbio/metadata/ValueConstrain.Type.html#values--">values()</a></span> - Static method in enum compbio.metadata.<a href="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata">ValueConstrain.Type</a></dt>
 218 <dd>
 219 <div class="block">Returns an array containing the constants of this enum type, in
 220 the order they are declared.</div>
 221 </dd>
 222 </dl>
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