JWS-109 & JWS-116 Regenerated the JABAWS JavaDoc (with eclipse java 8) and moved...
[jabaws.git] / website / docs / full_javadoc / compbio / ws / server / package-tree.html
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
2 <!-- NewPage -->
3 <html lang="en">
4 <head>
5 <!-- Generated by javadoc (1.8.0_121) on Fri Apr 21 15:32:50 BST 2017 -->
6 <title>compbio.ws.server Class Hierarchy</title>
7 <meta name="date" content="2017-04-21">
8 <link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
9 <script type="text/javascript" src="../../../script.js"></script>
10 </head>
11 <body>
12 <script type="text/javascript"><!--
13     try {
14         if (location.href.indexOf('is-external=true') == -1) {
15             parent.document.title="compbio.ws.server Class Hierarchy";
16         }
17     }
18     catch(err) {
19     }
20 //-->
21 </script>
22 <noscript>
23 <div>JavaScript is disabled on your browser.</div>
24 </noscript>
25 <!-- ========= START OF TOP NAVBAR ======= -->
26 <div class="topNav"><a name="navbar.top">
27 <!--   -->
28 </a>
29 <div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
30 <a name="navbar.top.firstrow">
31 <!--   -->
32 </a>
33 <ul class="navList" title="Navigation">
34 <li><a href="../../../overview-summary.html">Overview</a></li>
35 <li><a href="package-summary.html">Package</a></li>
36 <li>Class</li>
37 <li>Use</li>
38 <li class="navBarCell1Rev">Tree</li>
39 <li><a href="../../../deprecated-list.html">Deprecated</a></li>
40 <li><a href="../../../index-files/index-1.html">Index</a></li>
41 <li><a href="../../../help-doc.html">Help</a></li>
42 </ul>
43 </div>
44 <div class="subNav">
45 <ul class="navList">
46 <li><a href="../../../compbio/ws/client/package-tree.html">Prev</a></li>
47 <li>Next</li>
48 </ul>
49 <ul class="navList">
50 <li><a href="../../../index.html?compbio/ws/server/package-tree.html" target="_top">Frames</a></li>
51 <li><a href="package-tree.html" target="_top">No&nbsp;Frames</a></li>
52 </ul>
53 <ul class="navList" id="allclasses_navbar_top">
54 <li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
55 </ul>
56 <div>
57 <script type="text/javascript"><!--
58   allClassesLink = document.getElementById("allclasses_navbar_top");
59   if(window==top) {
60     allClassesLink.style.display = "block";
61   }
62   else {
63     allClassesLink.style.display = "none";
64   }
65   //-->
66 </script>
67 </div>
68 <a name="skip.navbar.top">
69 <!--   -->
70 </a></div>
71 <!-- ========= END OF TOP NAVBAR ========= -->
72 <div class="header">
73 <h1 class="title">Hierarchy For Package compbio.ws.server</h1>
74 <span class="packageHierarchyLabel">Package Hierarchies:</span>
75 <ul class="horizontal">
76 <li><a href="../../../overview-tree.html">All Packages</a></li>
77 </ul>
78 </div>
79 <div class="contentContainer">
80 <h2 title="Class Hierarchy">Class Hierarchy</h2>
81 <ul>
82 <li type="circle">java.lang.Object
83 <ul>
84 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/ClustalOWS.html" title="class in compbio.ws.server"><span class="typeNameLink">ClustalOWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
85 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/ClustalWS.html" title="class in compbio.ws.server"><span class="typeNameLink">ClustalWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
86 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/GAUtils.html" title="class in compbio.ws.server"><span class="typeNameLink">GAUtils</span></a></li>
87 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/GenericMetadataService.html" title="class in compbio.ws.server"><span class="typeNameLink">GenericMetadataService</span></a>&lt;T&gt;
88 <ul>
89 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/SequenceAnnotationService.html" title="class in compbio.ws.server"><span class="typeNameLink">SequenceAnnotationService</span></a>&lt;T&gt;
90 <ul>
91 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/AAConWS.html" title="class in compbio.ws.server"><span class="typeNameLink">AAConWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation</a>&lt;T&gt;)</li>
92 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/DisemblWS.html" title="class in compbio.ws.server"><span class="typeNameLink">DisemblWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation</a>&lt;T&gt;)</li>
93 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/GlobPlotWS.html" title="class in compbio.ws.server"><span class="typeNameLink">GlobPlotWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation</a>&lt;T&gt;)</li>
94 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/IUPredWS.html" title="class in compbio.ws.server"><span class="typeNameLink">IUPredWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation</a>&lt;T&gt;)</li>
95 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/JronnWS.html" title="class in compbio.ws.server"><span class="typeNameLink">JronnWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation</a>&lt;T&gt;)</li>
96 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/RNAalifoldWS.html" title="class in compbio.ws.server"><span class="typeNameLink">RNAalifoldWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation</a>&lt;T&gt;)</li>
97 </ul>
98 </li>
99 </ul>
100 </li>
101 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/GLprobsWS.html" title="class in compbio.ws.server"><span class="typeNameLink">GLprobsWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
102 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/MafftWS.html" title="class in compbio.ws.server"><span class="typeNameLink">MafftWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
103 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/MainManager.html" title="class in compbio.ws.server"><span class="typeNameLink">MainManager</span></a> (implements javax.servlet.ServletContextListener)</li>
104 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/MSAprobsWS.html" title="class in compbio.ws.server"><span class="typeNameLink">MSAprobsWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
105 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/MuscleWS.html" title="class in compbio.ws.server"><span class="typeNameLink">MuscleWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
106 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/ProbconsWS.html" title="class in compbio.ws.server"><span class="typeNameLink">ProbconsWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
107 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/RegistryWS.html" title="class in compbio.ws.server"><span class="typeNameLink">RegistryWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/JABAService.html" title="interface in compbio.data.msa">JABAService</a>, compbio.data.msa.<a href="../../../compbio/data/msa/RegistryWS.html" title="interface in compbio.data.msa">RegistryWS</a>)</li>
108 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/SetExecutableFlag.html" title="class in compbio.ws.server"><span class="typeNameLink">SetExecutableFlag</span></a> (implements javax.servlet.ServletContextListener)</li>
109 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/SimpleWSPublisher.html" title="class in compbio.ws.server"><span class="typeNameLink">SimpleWSPublisher</span></a></li>
110 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/TcoffeeWS.html" title="class in compbio.ws.server"><span class="typeNameLink">TcoffeeWS</span></a> (implements compbio.data.msa.<a href="../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS</a>&lt;T&gt;)</li>
111 <li type="circle">compbio.ws.server.<a href="../../../compbio/ws/server/WSUtil.html" title="class in compbio.ws.server"><span class="typeNameLink">WSUtil</span></a></li>
112 </ul>
113 </li>
114 </ul>
115 </div>
116 <!-- ======= START OF BOTTOM NAVBAR ====== -->
117 <div class="bottomNav"><a name="navbar.bottom">
118 <!--   -->
119 </a>
120 <div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
121 <a name="navbar.bottom.firstrow">
122 <!--   -->
123 </a>
124 <ul class="navList" title="Navigation">
125 <li><a href="../../../overview-summary.html">Overview</a></li>
126 <li><a href="package-summary.html">Package</a></li>
127 <li>Class</li>
128 <li>Use</li>
129 <li class="navBarCell1Rev">Tree</li>
130 <li><a href="../../../deprecated-list.html">Deprecated</a></li>
131 <li><a href="../../../index-files/index-1.html">Index</a></li>
132 <li><a href="../../../help-doc.html">Help</a></li>
133 </ul>
134 </div>
135 <div class="subNav">
136 <ul class="navList">
137 <li><a href="../../../compbio/ws/client/package-tree.html">Prev</a></li>
138 <li>Next</li>
139 </ul>
140 <ul class="navList">
141 <li><a href="../../../index.html?compbio/ws/server/package-tree.html" target="_top">Frames</a></li>
142 <li><a href="package-tree.html" target="_top">No&nbsp;Frames</a></li>
143 </ul>
144 <ul class="navList" id="allclasses_navbar_bottom">
145 <li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
146 </ul>
147 <div>
148 <script type="text/javascript"><!--
149   allClassesLink = document.getElementById("allclasses_navbar_bottom");
150   if(window==top) {
151     allClassesLink.style.display = "block";
152   }
153   else {
154     allClassesLink.style.display = "none";
155   }
156   //-->
157 </script>
158 </div>
159 <a name="skip.navbar.bottom">
160 <!--   -->
161 </a></div>
162 <!-- ======== END OF BOTTOM NAVBAR ======= -->
163 </body>
164 </html>