JWS-109 & JWS-116 Regenerated the JABAWS JavaDoc (with eclipse java 8) and moved...
[jabaws.git] / website / docs / full_javadoc / index-files / index-11.html
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
2 <!-- NewPage -->
3 <html lang="en">
4 <head>
5 <!-- Generated by javadoc (1.8.0_121) on Fri Apr 21 15:32:51 BST 2017 -->
6 <title>K-Index</title>
7 <meta name="date" content="2017-04-21">
8 <link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
9 <script type="text/javascript" src="../script.js"></script>
10 </head>
11 <body>
12 <script type="text/javascript"><!--
13     try {
14         if (location.href.indexOf('is-external=true') == -1) {
15             parent.document.title="K-Index";
16         }
17     }
18     catch(err) {
19     }
20 //-->
21 </script>
22 <noscript>
23 <div>JavaScript is disabled on your browser.</div>
24 </noscript>
25 <!-- ========= START OF TOP NAVBAR ======= -->
26 <div class="topNav"><a name="navbar.top">
27 <!--   -->
28 </a>
29 <div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
30 <a name="navbar.top.firstrow">
31 <!--   -->
32 </a>
33 <ul class="navList" title="Navigation">
34 <li><a href="../overview-summary.html">Overview</a></li>
35 <li>Package</li>
36 <li>Class</li>
37 <li>Use</li>
38 <li><a href="../overview-tree.html">Tree</a></li>
39 <li><a href="../deprecated-list.html">Deprecated</a></li>
40 <li class="navBarCell1Rev">Index</li>
41 <li><a href="../help-doc.html">Help</a></li>
42 </ul>
43 </div>
44 <div class="subNav">
45 <ul class="navList">
46 <li><a href="index-10.html">Prev Letter</a></li>
47 <li><a href="index-12.html">Next Letter</a></li>
48 </ul>
49 <ul class="navList">
50 <li><a href="../index.html?index-files/index-11.html" target="_top">Frames</a></li>
51 <li><a href="index-11.html" target="_top">No&nbsp;Frames</a></li>
52 </ul>
53 <ul class="navList" id="allclasses_navbar_top">
54 <li><a href="../allclasses-noframe.html">All&nbsp;Classes</a></li>
55 </ul>
56 <div>
57 <script type="text/javascript"><!--
58   allClassesLink = document.getElementById("allclasses_navbar_top");
59   if(window==top) {
60     allClassesLink.style.display = "block";
61   }
62   else {
63     allClassesLink.style.display = "none";
64   }
65   //-->
66 </script>
67 </div>
68 <a name="skip.navbar.top">
69 <!--   -->
70 </a></div>
71 <!-- ========= END OF TOP NAVBAR ========= -->
72 <div class="contentContainer"><a href="index-1.html">A</a>&nbsp;<a href="index-2.html">B</a>&nbsp;<a href="index-3.html">C</a>&nbsp;<a href="index-4.html">D</a>&nbsp;<a href="index-5.html">E</a>&nbsp;<a href="index-6.html">F</a>&nbsp;<a href="index-7.html">G</a>&nbsp;<a href="index-8.html">H</a>&nbsp;<a href="index-9.html">I</a>&nbsp;<a href="index-10.html">J</a>&nbsp;<a href="index-11.html">K</a>&nbsp;<a href="index-12.html">L</a>&nbsp;<a href="index-13.html">M</a>&nbsp;<a href="index-14.html">N</a>&nbsp;<a href="index-15.html">O</a>&nbsp;<a href="index-16.html">P</a>&nbsp;<a href="index-17.html">Q</a>&nbsp;<a href="index-18.html">R</a>&nbsp;<a href="index-19.html">S</a>&nbsp;<a href="index-20.html">T</a>&nbsp;<a href="index-21.html">U</a>&nbsp;<a href="index-22.html">V</a>&nbsp;<a href="index-23.html">W</a>&nbsp;<a href="index-24.html">_</a>&nbsp;<a name="I:K">
73 <!--   -->
74 </a>
75 <h2 class="title">K</h2>
76 <dl>
77 <dt><span class="memberNameLink"><a href="../compbio/runner/conservation/AACon.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.conservation.<a href="../compbio/runner/conservation/AACon.html" title="class in compbio.runner.conservation">AACon</a></dt>
78 <dd>&nbsp;</dd>
79 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/ClustalO.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/ClustalO.html" title="class in compbio.runner.msa">ClustalO</a></dt>
80 <dd>&nbsp;</dd>
81 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/ClustalW.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/ClustalW.html" title="class in compbio.runner.msa">ClustalW</a></dt>
82 <dd>&nbsp;</dd>
83 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/GLprobs.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/GLprobs.html" title="class in compbio.runner.msa">GLprobs</a></dt>
84 <dd>&nbsp;</dd>
85 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/Mafft.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/Mafft.html" title="class in compbio.runner.msa">Mafft</a></dt>
86 <dd>&nbsp;</dd>
87 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/MSAprobs.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/MSAprobs.html" title="class in compbio.runner.msa">MSAprobs</a></dt>
88 <dd>&nbsp;</dd>
89 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/Muscle.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/Muscle.html" title="class in compbio.runner.msa">Muscle</a></dt>
90 <dd>&nbsp;</dd>
91 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/Probcons.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/Probcons.html" title="class in compbio.runner.msa">Probcons</a></dt>
92 <dd>&nbsp;</dd>
93 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/Tcoffee.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/Tcoffee.html" title="class in compbio.runner.msa">Tcoffee</a></dt>
94 <dd>&nbsp;</dd>
95 <dt><span class="memberNameLink"><a href="../compbio/runner/structure/RNAalifold.html#KEY_VALUE_SEPARATOR">KEY_VALUE_SEPARATOR</a></span> - Static variable in class compbio.runner.structure.<a href="../compbio/runner/structure/RNAalifold.html" title="class in compbio.runner.structure">RNAalifold</a></dt>
96 <dd>&nbsp;</dd>
97 <dt><span class="memberNameLink"><a href="../compbio/ws/client/CmdHelper.html#keyFound-java.lang.String:A-java.lang.String-">keyFound(String[], String)</a></span> - Static method in class compbio.ws.client.<a href="../compbio/ws/client/CmdHelper.html" title="class in compbio.ws.client">CmdHelper</a></dt>
98 <dd>
99 <div class="block">Checks whether the key is in the command line</div>
100 </dd>
101 </dl>
102 <a href="index-1.html">A</a>&nbsp;<a href="index-2.html">B</a>&nbsp;<a href="index-3.html">C</a>&nbsp;<a href="index-4.html">D</a>&nbsp;<a href="index-5.html">E</a>&nbsp;<a href="index-6.html">F</a>&nbsp;<a href="index-7.html">G</a>&nbsp;<a href="index-8.html">H</a>&nbsp;<a href="index-9.html">I</a>&nbsp;<a href="index-10.html">J</a>&nbsp;<a href="index-11.html">K</a>&nbsp;<a href="index-12.html">L</a>&nbsp;<a href="index-13.html">M</a>&nbsp;<a href="index-14.html">N</a>&nbsp;<a href="index-15.html">O</a>&nbsp;<a href="index-16.html">P</a>&nbsp;<a href="index-17.html">Q</a>&nbsp;<a href="index-18.html">R</a>&nbsp;<a href="index-19.html">S</a>&nbsp;<a href="index-20.html">T</a>&nbsp;<a href="index-21.html">U</a>&nbsp;<a href="index-22.html">V</a>&nbsp;<a href="index-23.html">W</a>&nbsp;<a href="index-24.html">_</a>&nbsp;</div>
103 <!-- ======= START OF BOTTOM NAVBAR ====== -->
104 <div class="bottomNav"><a name="navbar.bottom">
105 <!--   -->
106 </a>
107 <div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
108 <a name="navbar.bottom.firstrow">
109 <!--   -->
110 </a>
111 <ul class="navList" title="Navigation">
112 <li><a href="../overview-summary.html">Overview</a></li>
113 <li>Package</li>
114 <li>Class</li>
115 <li>Use</li>
116 <li><a href="../overview-tree.html">Tree</a></li>
117 <li><a href="../deprecated-list.html">Deprecated</a></li>
118 <li class="navBarCell1Rev">Index</li>
119 <li><a href="../help-doc.html">Help</a></li>
120 </ul>
121 </div>
122 <div class="subNav">
123 <ul class="navList">
124 <li><a href="index-10.html">Prev Letter</a></li>
125 <li><a href="index-12.html">Next Letter</a></li>
126 </ul>
127 <ul class="navList">
128 <li><a href="../index.html?index-files/index-11.html" target="_top">Frames</a></li>
129 <li><a href="index-11.html" target="_top">No&nbsp;Frames</a></li>
130 </ul>
131 <ul class="navList" id="allclasses_navbar_bottom">
132 <li><a href="../allclasses-noframe.html">All&nbsp;Classes</a></li>
133 </ul>
134 <div>
135 <script type="text/javascript"><!--
136   allClassesLink = document.getElementById("allclasses_navbar_bottom");
137   if(window==top) {
138     allClassesLink.style.display = "block";
139   }
140   else {
141     allClassesLink.style.display = "none";
142   }
143   //-->
144 </script>
145 </div>
146 <a name="skip.navbar.bottom">
147 <!--   -->
148 </a></div>
149 <!-- ======== END OF BOTTOM NAVBAR ======= -->
150 </body>
151 </html>