updated javadoc
[jabaws.git] / website / full_javadoc / compbio / data / msa / class-use / Metadata.html
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">\r
2 <!--NewPage-->\r
3 <HTML>\r
4 <HEAD>\r
5 <!-- Generated by javadoc (build 1.6.0_24) on Fri Aug 12 14:32:36 BST 2011 -->\r
6 <TITLE>\r
7 Uses of Interface compbio.data.msa.Metadata\r
8 </TITLE>\r
9 \r
10 <META NAME="date" CONTENT="2011-08-12">\r
11 \r
12 <LINK REL ="stylesheet" TYPE="text/css" HREF="../../../../stylesheet.css" TITLE="Style">\r
13 \r
14 <SCRIPT type="text/javascript">\r
15 function windowTitle()\r
16 {\r
17     if (location.href.indexOf('is-external=true') == -1) {\r
18         parent.document.title="Uses of Interface compbio.data.msa.Metadata";\r
19     }\r
20 }\r
21 </SCRIPT>\r
22 <NOSCRIPT>\r
23 </NOSCRIPT>\r
24 \r
25 </HEAD>\r
26 \r
27 <BODY BGCOLOR="white" onload="windowTitle();">\r
28 <HR>\r
29 \r
30 \r
31 <!-- ========= START OF TOP NAVBAR ======= -->\r
32 <A NAME="navbar_top"><!-- --></A>\r
33 <A HREF="#skip-navbar_top" title="Skip navigation links"></A>\r
34 <TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">\r
35 <TR>\r
36 <TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">\r
37 <A NAME="navbar_top_firstrow"><!-- --></A>\r
38 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">\r
39   <TR ALIGN="center" VALIGN="top">\r
40   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
41   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>\r
42   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa"><FONT CLASS="NavBarFont1"><B>Class</B></FONT></A>&nbsp;</TD>\r
43   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Use</B></FONT>&nbsp;</TD>\r
44   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>\r
45   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>\r
46   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../index-files/index-1.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A>&nbsp;</TD>\r
47   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>\r
48   </TR>\r
49 </TABLE>\r
50 </TD>\r
51 <TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>\r
52 </EM>\r
53 </TD>\r
54 </TR>\r
55 \r
56 <TR>\r
57 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
58 &nbsp;PREV&nbsp;\r
59 &nbsp;NEXT</FONT></TD>\r
60 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
61   <A HREF="../../../../index.html?compbio/data/msa/\class-useMetadata.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
62 &nbsp;<A HREF="Metadata.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;\r
63 &nbsp;<SCRIPT type="text/javascript">\r
64   <!--\r
65   if(window==top) {\r
66     document.writeln('<A HREF="../../../../allclasses-noframe.html"><B>All Classes</B></A>');\r
67   }\r
68   //-->\r
69 </SCRIPT>\r
70 <NOSCRIPT>\r
71   <A HREF="../../../../allclasses-noframe.html"><B>All Classes</B></A>\r
72 </NOSCRIPT>\r
73 \r
74 \r
75 </FONT></TD>\r
76 </TR>\r
77 </TABLE>\r
78 <A NAME="skip-navbar_top"></A>\r
79 <!-- ========= END OF TOP NAVBAR ========= -->\r
80 \r
81 <HR>\r
82 <CENTER>\r
83 <H2>\r
84 <B>Uses of Interface<br>compbio.data.msa.Metadata</B></H2>\r
85 </CENTER>\r
86 \r
87 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
88 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
89 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
90 Packages that use <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa">Metadata</A></FONT></TH>\r
91 </TR>\r
92 <TR BGCOLOR="white" CLASS="TableRowColor">\r
93 <TD><A HREF="#compbio.data.msa"><B>compbio.data.msa</B></A></TD>\r
94 <TD>Web Service interfaces for JAva Bioinformatics Analysis Web Services.&nbsp;</TD>\r
95 </TR>\r
96 <TR BGCOLOR="white" CLASS="TableRowColor">\r
97 <TD><A HREF="#compbio.ws.server"><B>compbio.ws.server</B></A></TD>\r
98 <TD>&nbsp;&nbsp;</TD>\r
99 </TR>\r
100 </TABLE>\r
101 &nbsp;\r
102 <P>\r
103 <A NAME="compbio.data.msa"><!-- --></A>\r
104 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
105 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
106 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
107 Uses of <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa">Metadata</A> in <A HREF="../../../../compbio/data/msa/package-summary.html">compbio.data.msa</A></FONT></TH>\r
108 </TR>\r
109 </TABLE>\r
110 &nbsp;\r
111 <P>\r
112 \r
113 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
114 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
115 <TH ALIGN="left" COLSPAN="2">Subinterfaces of <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa">Metadata</A> in <A HREF="../../../../compbio/data/msa/package-summary.html">compbio.data.msa</A></FONT></TH>\r
116 </TR>\r
117 <TR BGCOLOR="white" CLASS="TableRowColor">\r
118 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
119 <CODE>&nbsp;interface</CODE></FONT></TD>\r
120 <TD><CODE><B><A HREF="../../../../compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa">MsaWS&lt;T&gt;</A></B></CODE>\r
121 \r
122 <BR>\r
123 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Multiple Sequence Alignment (MSA) Web Services Interface</TD>\r
124 </TR>\r
125 <TR BGCOLOR="white" CLASS="TableRowColor">\r
126 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
127 <CODE>&nbsp;interface</CODE></FONT></TD>\r
128 <TD><CODE><B><A HREF="../../../../compbio/data/msa/SequenceAnnotation.html" title="interface in compbio.data.msa">SequenceAnnotation&lt;T&gt;</A></B></CODE>\r
129 \r
130 <BR>\r
131 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Interface for tools that results to one or more annotation to sequence(s)
132  
133  Single, multiple sequences their groups or alignments can be annotated</TD>\r
134 </TR>\r
135 </TABLE>\r
136 &nbsp;\r
137 <P>\r
138 <A NAME="compbio.ws.server"><!-- --></A>\r
139 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
140 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
141 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
142 Uses of <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa">Metadata</A> in <A HREF="../../../../compbio/ws/server/package-summary.html">compbio.ws.server</A></FONT></TH>\r
143 </TR>\r
144 </TABLE>\r
145 &nbsp;\r
146 <P>\r
147 \r
148 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
149 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
150 <TH ALIGN="left" COLSPAN="2">Classes in <A HREF="../../../../compbio/ws/server/package-summary.html">compbio.ws.server</A> that implement <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa">Metadata</A></FONT></TH>\r
151 </TR>\r
152 <TR BGCOLOR="white" CLASS="TableRowColor">\r
153 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
154 <CODE>&nbsp;class</CODE></FONT></TD>\r
155 <TD><CODE><B><A HREF="../../../../compbio/ws/server/AAConWS.html" title="class in compbio.ws.server">AAConWS</A></B></CODE>\r
156 \r
157 <BR>\r
158 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
159 </TR>\r
160 <TR BGCOLOR="white" CLASS="TableRowColor">\r
161 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
162 <CODE>&nbsp;class</CODE></FONT></TD>\r
163 <TD><CODE><B><A HREF="../../../../compbio/ws/server/ClustalOWS.html" title="class in compbio.ws.server">ClustalOWS</A></B></CODE>\r
164 \r
165 <BR>\r
166 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
167 </TR>\r
168 <TR BGCOLOR="white" CLASS="TableRowColor">\r
169 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
170 <CODE>&nbsp;class</CODE></FONT></TD>\r
171 <TD><CODE><B><A HREF="../../../../compbio/ws/server/ClustalWS.html" title="class in compbio.ws.server">ClustalWS</A></B></CODE>\r
172 \r
173 <BR>\r
174 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
175 </TR>\r
176 <TR BGCOLOR="white" CLASS="TableRowColor">\r
177 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
178 <CODE>&nbsp;class</CODE></FONT></TD>\r
179 <TD><CODE><B><A HREF="../../../../compbio/ws/server/DisemblWS.html" title="class in compbio.ws.server">DisemblWS</A></B></CODE>\r
180 \r
181 <BR>\r
182 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
183 </TR>\r
184 <TR BGCOLOR="white" CLASS="TableRowColor">\r
185 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
186 <CODE>&nbsp;class</CODE></FONT></TD>\r
187 <TD><CODE><B><A HREF="../../../../compbio/ws/server/GlobPlotWS.html" title="class in compbio.ws.server">GlobPlotWS</A></B></CODE>\r
188 \r
189 <BR>\r
190 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
191 </TR>\r
192 <TR BGCOLOR="white" CLASS="TableRowColor">\r
193 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
194 <CODE>&nbsp;class</CODE></FONT></TD>\r
195 <TD><CODE><B><A HREF="../../../../compbio/ws/server/IUPredWS.html" title="class in compbio.ws.server">IUPredWS</A></B></CODE>\r
196 \r
197 <BR>\r
198 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
199 </TR>\r
200 <TR BGCOLOR="white" CLASS="TableRowColor">\r
201 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
202 <CODE>&nbsp;class</CODE></FONT></TD>\r
203 <TD><CODE><B><A HREF="../../../../compbio/ws/server/JronnWS.html" title="class in compbio.ws.server">JronnWS</A></B></CODE>\r
204 \r
205 <BR>\r
206 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
207 </TR>\r
208 <TR BGCOLOR="white" CLASS="TableRowColor">\r
209 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
210 <CODE>&nbsp;class</CODE></FONT></TD>\r
211 <TD><CODE><B><A HREF="../../../../compbio/ws/server/MafftWS.html" title="class in compbio.ws.server">MafftWS</A></B></CODE>\r
212 \r
213 <BR>\r
214 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
215 </TR>\r
216 <TR BGCOLOR="white" CLASS="TableRowColor">\r
217 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
218 <CODE>&nbsp;class</CODE></FONT></TD>\r
219 <TD><CODE><B><A HREF="../../../../compbio/ws/server/MuscleWS.html" title="class in compbio.ws.server">MuscleWS</A></B></CODE>\r
220 \r
221 <BR>\r
222 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
223 </TR>\r
224 <TR BGCOLOR="white" CLASS="TableRowColor">\r
225 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
226 <CODE>&nbsp;class</CODE></FONT></TD>\r
227 <TD><CODE><B><A HREF="../../../../compbio/ws/server/ProbconsWS.html" title="class in compbio.ws.server">ProbconsWS</A></B></CODE>\r
228 \r
229 <BR>\r
230 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
231 </TR>\r
232 <TR BGCOLOR="white" CLASS="TableRowColor">\r
233 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
234 <CODE>&nbsp;class</CODE></FONT></TD>\r
235 <TD><CODE><B><A HREF="../../../../compbio/ws/server/TcoffeeWS.html" title="class in compbio.ws.server">TcoffeeWS</A></B></CODE>\r
236 \r
237 <BR>\r
238 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
239 </TR>\r
240 </TABLE>\r
241 &nbsp;\r
242 <P>\r
243 <HR>\r
244 \r
245 \r
246 <!-- ======= START OF BOTTOM NAVBAR ====== -->\r
247 <A NAME="navbar_bottom"><!-- --></A>\r
248 <A HREF="#skip-navbar_bottom" title="Skip navigation links"></A>\r
249 <TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">\r
250 <TR>\r
251 <TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">\r
252 <A NAME="navbar_bottom_firstrow"><!-- --></A>\r
253 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">\r
254   <TR ALIGN="center" VALIGN="top">\r
255   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
256   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>\r
257   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../compbio/data/msa/Metadata.html" title="interface in compbio.data.msa"><FONT CLASS="NavBarFont1"><B>Class</B></FONT></A>&nbsp;</TD>\r
258   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Use</B></FONT>&nbsp;</TD>\r
259   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>\r
260   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>\r
261   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../index-files/index-1.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A>&nbsp;</TD>\r
262   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>\r
263   </TR>\r
264 </TABLE>\r
265 </TD>\r
266 <TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>\r
267 </EM>\r
268 </TD>\r
269 </TR>\r
270 \r
271 <TR>\r
272 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
273 &nbsp;PREV&nbsp;\r
274 &nbsp;NEXT</FONT></TD>\r
275 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
276   <A HREF="../../../../index.html?compbio/data/msa/\class-useMetadata.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
277 &nbsp;<A HREF="Metadata.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;\r
278 &nbsp;<SCRIPT type="text/javascript">\r
279   <!--\r
280   if(window==top) {\r
281     document.writeln('<A HREF="../../../../allclasses-noframe.html"><B>All Classes</B></A>');\r
282   }\r
283   //-->\r
284 </SCRIPT>\r
285 <NOSCRIPT>\r
286   <A HREF="../../../../allclasses-noframe.html"><B>All Classes</B></A>\r
287 </NOSCRIPT>\r
288 \r
289 \r
290 </FONT></TD>\r
291 </TR>\r
292 </TABLE>\r
293 <A NAME="skip-navbar_bottom"></A>\r
294 <!-- ======== END OF BOTTOM NAVBAR ======= -->\r
295 \r
296 <HR>\r
297 \r
298 </BODY>\r
299 </HTML>\r