website/full_javadoc/compbio/metadata/class-use/ChunkHolder.html

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   7 Uses of Class compbio.metadata.ChunkHolder\r
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  42   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata"><FONT CLASS="NavBarFont1"><B>Class</B></FONT></A>&nbsp;</TD>\r
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  84 <B>Uses of Class<br>compbio.metadata.ChunkHolder</B></H2>\r
  85 </CENTER>\r
  86 \r
  87 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
  88 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
  89 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
  90 Packages that use <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></FONT></TH>\r
  91 </TR>\r
  92 <TR BGCOLOR="white" CLASS="TableRowColor">\r
  93 <TD><A HREF="#compbio.data.msa"><B>compbio.data.msa</B></A></TD>\r
  94 <TD>&nbsp;&nbsp;</TD>\r
  95 </TR>\r
  96 <TR BGCOLOR="white" CLASS="TableRowColor">\r
  97 <TD><A HREF="#compbio.data.msa.jaxws"><B>compbio.data.msa.jaxws</B></A></TD>\r
  98 <TD>&nbsp;&nbsp;</TD>\r
  99 </TR>\r
 100 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 101 <TD><A HREF="#compbio.engine"><B>compbio.engine</B></A></TD>\r
 102 <TD>&nbsp;&nbsp;</TD>\r
 103 </TR>\r
 104 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 105 <TD><A HREF="#compbio.ws.server"><B>compbio.ws.server</B></A></TD>\r
 106 <TD>&nbsp;&nbsp;</TD>\r
 107 </TR>\r
 108 </TABLE>\r
 109 &nbsp;\r
 110 <P>\r
 111 <A NAME="compbio.data.msa"><!-- --></A>\r
 112 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 113 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 114 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 115 Uses of <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A> in <A HREF="../../../compbio/data/msa/package-summary.html">compbio.data.msa</A></FONT></TH>\r
 116 </TR>\r
 117 </TABLE>\r
 118 &nbsp;\r
 119 <P>\r
 120 \r
 121 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 122 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 123 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/package-summary.html">compbio.data.msa</A> that return <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></FONT></TH>\r
 124 </TR>\r
 125 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 126 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 127 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 128 <TD><CODE><B>MsaWS.</B><B><A HREF="../../../compbio/data/msa/MsaWS.html#pullExecStatistics(java.lang.String, long)">pullExecStatistics</A></B>(java.lang.String&nbsp;jobId,\r
 129                    long&nbsp;position)</CODE>\r
 130 \r
 131 <BR>\r
 132 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Reads 1kb chunk from the statistics file which is specific to a given web
 133  service from the position.</TD>\r
 134 </TR>\r
 135 </TABLE>\r
 136 &nbsp;\r
 137 <P>\r
 138 <A NAME="compbio.data.msa.jaxws"><!-- --></A>\r
 139 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 140 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 141 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 142 Uses of <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A> in <A HREF="../../../compbio/data/msa/jaxws/package-summary.html">compbio.data.msa.jaxws</A></FONT></TH>\r
 143 </TR>\r
 144 </TABLE>\r
 145 &nbsp;\r
 146 <P>\r
 147 \r
 148 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 149 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 150 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/jaxws/package-summary.html">compbio.data.msa.jaxws</A> that return <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></FONT></TH>\r
 151 </TR>\r
 152 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 153 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 154 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 155 <TD><CODE><B>PullFileResponse.</B><B><A HREF="../../../compbio/data/msa/jaxws/PullFileResponse.html#getReturn()">getReturn</A></B>()</CODE>\r
 156 \r
 157 <BR>\r
 158 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 159 </TR>\r
 160 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 161 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 162 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 163 <TD><CODE><B>PullExecStatisticsResponse.</B><B><A HREF="../../../compbio/data/msa/jaxws/PullExecStatisticsResponse.html#getReturn()">getReturn</A></B>()</CODE>\r
 164 \r
 165 <BR>\r
 166 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 167 </TR>\r
 168 </TABLE>\r
 169 &nbsp;\r
 170 <P>\r
 171 \r
 172 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 173 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 174 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/jaxws/package-summary.html">compbio.data.msa.jaxws</A> with parameters of type <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></FONT></TH>\r
 175 </TR>\r
 176 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 177 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 178 <CODE>&nbsp;void</CODE></FONT></TD>\r
 179 <TD><CODE><B>PullFileResponse.</B><B><A HREF="../../../compbio/data/msa/jaxws/PullFileResponse.html#setReturn(compbio.metadata.ChunkHolder)">setReturn</A></B>(<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A>&nbsp;_return)</CODE>\r
 180 \r
 181 <BR>\r
 182 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 183 </TR>\r
 184 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 185 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 186 <CODE>&nbsp;void</CODE></FONT></TD>\r
 187 <TD><CODE><B>PullExecStatisticsResponse.</B><B><A HREF="../../../compbio/data/msa/jaxws/PullExecStatisticsResponse.html#setReturn(compbio.metadata.ChunkHolder)">setReturn</A></B>(<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A>&nbsp;_return)</CODE>\r
 188 \r
 189 <BR>\r
 190 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 191 </TR>\r
 192 </TABLE>\r
 193 &nbsp;\r
 194 <P>\r
 195 <A NAME="compbio.engine"><!-- --></A>\r
 196 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 197 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 198 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 199 Uses of <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A> in <A HREF="../../../compbio/engine/package-summary.html">compbio.engine</A></FONT></TH>\r
 200 </TR>\r
 201 </TABLE>\r
 202 &nbsp;\r
 203 <P>\r
 204 \r
 205 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 206 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 207 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/package-summary.html">compbio.engine</A> that return <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></FONT></TH>\r
 208 </TR>\r
 209 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 210 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 211 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 212 <TD><CODE><B>FilePuller.</B><B><A HREF="../../../compbio/engine/FilePuller.html#pull(long)">pull</A></B>(long&nbsp;position)</CODE>\r
 213 \r
 214 <BR>\r
 215 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 216 </TR>\r
 217 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 218 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 219 <CODE>static&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 220 <TD><CODE><B>ProgressGetter.</B><B><A HREF="../../../compbio/engine/ProgressGetter.html#pull(java.lang.String, long)">pull</A></B>(java.lang.String&nbsp;file,\r
 221      long&nbsp;position)</CODE>\r
 222 \r
 223 <BR>\r
 224 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 225 </TR>\r
 226 </TABLE>\r
 227 &nbsp;\r
 228 <P>\r
 229 <A NAME="compbio.ws.server"><!-- --></A>\r
 230 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 231 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 232 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 233 Uses of <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A> in <A HREF="../../../compbio/ws/server/package-summary.html">compbio.ws.server</A></FONT></TH>\r
 234 </TR>\r
 235 </TABLE>\r
 236 &nbsp;\r
 237 <P>\r
 238 \r
 239 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 240 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 241 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/ws/server/package-summary.html">compbio.ws.server</A> that return <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></FONT></TH>\r
 242 </TR>\r
 243 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 244 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 245 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 246 <TD><CODE><B>TcoffeeWS.</B><B><A HREF="../../../compbio/ws/server/TcoffeeWS.html#pullExecStatistics(java.lang.String, long)">pullExecStatistics</A></B>(java.lang.String&nbsp;jobId,\r
 247                    long&nbsp;position)</CODE>\r
 248 \r
 249 <BR>\r
 250 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 251 </TR>\r
 252 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 253 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 254 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 255 <TD><CODE><B>ProbconsWS.</B><B><A HREF="../../../compbio/ws/server/ProbconsWS.html#pullExecStatistics(java.lang.String, long)">pullExecStatistics</A></B>(java.lang.String&nbsp;jobId,\r
 256                    long&nbsp;position)</CODE>\r
 257 \r
 258 <BR>\r
 259 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 260 </TR>\r
 261 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 262 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 263 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 264 <TD><CODE><B>MuscleWS.</B><B><A HREF="../../../compbio/ws/server/MuscleWS.html#pullExecStatistics(java.lang.String, long)">pullExecStatistics</A></B>(java.lang.String&nbsp;jobId,\r
 265                    long&nbsp;position)</CODE>\r
 266 \r
 267 <BR>\r
 268 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 269 </TR>\r
 270 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 271 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 272 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 273 <TD><CODE><B>MafftWS.</B><B><A HREF="../../../compbio/ws/server/MafftWS.html#pullExecStatistics(java.lang.String, long)">pullExecStatistics</A></B>(java.lang.String&nbsp;jobId,\r
 274                    long&nbsp;position)</CODE>\r
 275 \r
 276 <BR>\r
 277 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 278 </TR>\r
 279 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 280 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 281 <CODE>&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 282 <TD><CODE><B>ClustalWS.</B><B><A HREF="../../../compbio/ws/server/ClustalWS.html#pullExecStatistics(java.lang.String, long)">pullExecStatistics</A></B>(java.lang.String&nbsp;jobId,\r
 283                    long&nbsp;position)</CODE>\r
 284 \r
 285 <BR>\r
 286 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 287 </TR>\r
 288 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 289 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 290 <CODE>static&nbsp;<A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A></CODE></FONT></TD>\r
 291 <TD><CODE><B>WSUtil.</B><B><A HREF="../../../compbio/ws/server/WSUtil.html#pullFile(java.lang.String, long)">pullFile</A></B>(java.lang.String&nbsp;jobId,\r
 292          long&nbsp;position)</CODE>\r
 293 \r
 294 <BR>\r
 295 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 296 </TR>\r
 297 </TABLE>\r
 298 &nbsp;\r
 299 <P>\r
 300 <HR>\r
 301 \r
 302 \r
 303 <!-- ======= START OF BOTTOM NAVBAR ====== -->\r
 304 <A NAME="navbar_bottom"><!-- --></A>\r
 305 <A HREF="#skip-navbar_bottom" title="Skip navigation links"></A>\r
 306 <TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">\r
 307 <TR>\r
 308 <TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">\r
 309 <A NAME="navbar_bottom_firstrow"><!-- --></A>\r
 310 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">\r
 311   <TR ALIGN="center" VALIGN="top">\r
 312   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
 313   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>\r
 314   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata"><FONT CLASS="NavBarFont1"><B>Class</B></FONT></A>&nbsp;</TD>\r
 315   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Use</B></FONT>&nbsp;</TD>\r
 316   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../overview-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>\r
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 319   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>\r
 320   </TR>\r
 321 </TABLE>\r
 322 </TD>\r
 323 <TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>\r
 324 </EM>\r
 325 </TD>\r
 326 </TR>\r
 327 \r
 328 <TR>\r
 329 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
 330 &nbsp;PREV&nbsp;\r
 331 &nbsp;NEXT</FONT></TD>\r
 332 <TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
 333   <A HREF="../../../index.html?compbio/metadata/\class-useChunkHolder.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
 334 &nbsp;<A HREF="ChunkHolder.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;\r
 335 &nbsp;<SCRIPT type="text/javascript">\r
 336   <!--\r
 337   if(window==top) {\r
 338     document.writeln('<A HREF="../../../allclasses-noframe.html"><B>All Classes</B></A>');\r
 339   }\r
 340   //-->\r
 341 </SCRIPT>\r
 342 <NOSCRIPT>\r
 343   <A HREF="../../../allclasses-noframe.html"><B>All Classes</B></A>\r
 344 </NOSCRIPT>\r
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 349 </TABLE>\r
 350 <A NAME="skip-navbar_bottom"></A>\r
 351 <!-- ======== END OF BOTTOM NAVBAR ======= -->\r
 352 \r
 353 <HR>\r
 354 \r
 355 </BODY>\r
 356 </HTML>\r