website/full_javadoc/compbio/metadata/class-use/ResultNotAvailableException.html

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   7 Uses of Class compbio.metadata.ResultNotAvailableException\r
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  42   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata"><FONT CLASS="NavBarFont1"><B>Class</B></FONT></A>&nbsp;</TD>\r
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  83 <H2>\r
  84 <B>Uses of Class<br>compbio.metadata.ResultNotAvailableException</B></H2>\r
  85 </CENTER>\r
  86 \r
  87 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
  88 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
  89 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
  90 Packages that use <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
  91 </TR>\r
  92 <TR BGCOLOR="white" CLASS="TableRowColor">\r
  93 <TD><A HREF="#compbio.data.msa"><B>compbio.data.msa</B></A></TD>\r
  94 <TD>&nbsp;&nbsp;</TD>\r
  95 </TR>\r
  96 <TR BGCOLOR="white" CLASS="TableRowColor">\r
  97 <TD><A HREF="#compbio.engine"><B>compbio.engine</B></A></TD>\r
  98 <TD>&nbsp;&nbsp;</TD>\r
  99 </TR>\r
 100 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 101 <TD><A HREF="#compbio.engine.client"><B>compbio.engine.client</B></A></TD>\r
 102 <TD>Classes and interfaces representing an input for engines.&nbsp;</TD>\r
 103 </TR>\r
 104 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 105 <TD><A HREF="#compbio.engine.cluster.drmaa"><B>compbio.engine.cluster.drmaa</B></A></TD>\r
 106 <TD>An cluster engine classes responsible for execution of Executables on the clusters.&nbsp;</TD>\r
 107 </TR>\r
 108 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 109 <TD><A HREF="#compbio.engine.local"><B>compbio.engine.local</B></A></TD>\r
 110 <TD>An local engine classes responsible for execution of Executables on the local computer
 111  (the same machine as JVM running these classes).&nbsp;</TD>\r
 112 </TR>\r
 113 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 114 <TD><A HREF="#compbio.runner.msa"><B>compbio.runner.msa</B></A></TD>\r
 115 <TD>Wrappers for native executables for multiple sequence alignment (msa)&nbsp;</TD>\r
 116 </TR>\r
 117 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 118 <TD><A HREF="#compbio.runner.psiblast"><B>compbio.runner.psiblast</B></A></TD>\r
 119 <TD>&nbsp;&nbsp;</TD>\r
 120 </TR>\r
 121 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 122 <TD><A HREF="#compbio.ws.server"><B>compbio.ws.server</B></A></TD>\r
 123 <TD>&nbsp;&nbsp;</TD>\r
 124 </TR>\r
 125 </TABLE>\r
 126 &nbsp;\r
 127 <P>\r
 128 <A NAME="compbio.data.msa"><!-- --></A>\r
 129 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 130 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 131 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 132 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/data/msa/package-summary.html">compbio.data.msa</A></FONT></TH>\r
 133 </TR>\r
 134 </TABLE>\r
 135 &nbsp;\r
 136 <P>\r
 137 \r
 138 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 139 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 140 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/package-summary.html">compbio.data.msa</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 141 </TR>\r
 142 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 143 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 144 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 145 <TD><CODE><B>MsaWS.</B><B><A HREF="../../../compbio/data/msa/MsaWS.html#getResult(java.lang.String)">getResult</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 146 \r
 147 <BR>\r
 148 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Return the result of the job.</TD>\r
 149 </TR>\r
 150 </TABLE>\r
 151 &nbsp;\r
 152 <P>\r
 153 <A NAME="compbio.engine"><!-- --></A>\r
 154 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 155 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 156 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 157 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/engine/package-summary.html">compbio.engine</A></FONT></TH>\r
 158 </TR>\r
 159 </TABLE>\r
 160 &nbsp;\r
 161 <P>\r
 162 \r
 163 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 164 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 165 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/package-summary.html">compbio.engine</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 166 </TR>\r
 167 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 168 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 169 <CODE>&nbsp;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>\r
 170 <TD><CODE><B>AsyncExecutor.</B><B><A HREF="../../../compbio/engine/AsyncExecutor.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 171 \r
 172 <BR>\r
 173 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Retrieve the results of the job.</TD>\r
 174 </TR>\r
 175 </TABLE>\r
 176 &nbsp;\r
 177 <P>\r
 178 <A NAME="compbio.engine.client"><!-- --></A>\r
 179 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 180 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 181 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 182 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/engine/client/package-summary.html">compbio.engine.client</A></FONT></TH>\r
 183 </TR>\r
 184 </TABLE>\r
 185 &nbsp;\r
 186 <P>\r
 187 \r
 188 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 189 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 190 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/client/package-summary.html">compbio.engine.client</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 191 </TR>\r
 192 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 193 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 194 <CODE>\r
 195 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="0" SUMMARY="">\r
 196 <TR ALIGN="right" VALIGN="">\r
 197 <TD NOWRAP><FONT SIZE="-1">\r
 198 <CODE>&lt;V&gt; V</CODE></FONT></TD>\r
 199 </TR>\r
 200 </TABLE>\r
 201 </CODE></FONT></TD>\r
 202 <TD><CODE><B>ConfiguredExecutable.</B><B><A HREF="../../../compbio/engine/client/ConfiguredExecutable.html#getResults()">getResults</A></B>()</CODE>\r
 203 \r
 204 <BR>\r
 205 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 206 </TR>\r
 207 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 208 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 209 <CODE>\r
 210 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="0" SUMMARY="">\r
 211 <TR ALIGN="right" VALIGN="">\r
 212 <TD NOWRAP><FONT SIZE="-1">\r
 213 <CODE>&lt;V&gt; V</CODE></FONT></TD>\r
 214 </TR>\r
 215 </TABLE>\r
 216 </CODE></FONT></TD>\r
 217 <TD><CODE><B>ConfExecutable.</B><B><A HREF="../../../compbio/engine/client/ConfExecutable.html#getResults()">getResults</A></B>()</CODE>\r
 218 \r
 219 <BR>\r
 220 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 221 </TR>\r
 222 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 223 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 224 <CODE>\r
 225 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="0" SUMMARY="">\r
 226 <TR ALIGN="right" VALIGN="">\r
 227 <TD NOWRAP><FONT SIZE="-1">\r
 228 <CODE>&lt;V&gt; V</CODE></FONT></TD>\r
 229 </TR>\r
 230 </TABLE>\r
 231 </CODE></FONT></TD>\r
 232 <TD><CODE><B>Executable.</B><B><A HREF="../../../compbio/engine/client/Executable.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;directory)</CODE>\r
 233 \r
 234 <BR>\r
 235 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 236 </TR>\r
 237 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 238 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 239 <CODE>\r
 240 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="0" SUMMARY="">\r
 241 <TR ALIGN="right" VALIGN="">\r
 242 <TD NOWRAP><FONT SIZE="-1">\r
 243 <CODE>&lt;V&gt; V</CODE></FONT></TD>\r
 244 </TR>\r
 245 </TABLE>\r
 246 </CODE></FONT></TD>\r
 247 <TD><CODE><B>ConfExecutable.</B><B><A HREF="../../../compbio/engine/client/ConfExecutable.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;directory)</CODE>\r
 248 \r
 249 <BR>\r
 250 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 251 </TR>\r
 252 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 253 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 254 <CODE>static&nbsp;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>\r
 255 <TD><CODE><B>Util.</B><B><A HREF="../../../compbio/engine/client/Util.html#loadExecutable(java.lang.String)">loadExecutable</A></B>(java.lang.String&nbsp;taskId)</CODE>\r
 256 \r
 257 <BR>\r
 258 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 259 </TR>\r
 260 </TABLE>\r
 261 &nbsp;\r
 262 <P>\r
 263 <A NAME="compbio.engine.cluster.drmaa"><!-- --></A>\r
 264 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 265 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 266 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 267 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/engine/cluster/drmaa/package-summary.html">compbio.engine.cluster.drmaa</A></FONT></TH>\r
 268 </TR>\r
 269 </TABLE>\r
 270 &nbsp;\r
 271 <P>\r
 272 \r
 273 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 274 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 275 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/cluster/drmaa/package-summary.html">compbio.engine.cluster.drmaa</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 276 </TR>\r
 277 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 278 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 279 <CODE>&nbsp;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>\r
 280 <TD><CODE><B>ClusterSession.</B><B><A HREF="../../../compbio/engine/cluster/drmaa/ClusterSession.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;taskId)</CODE>\r
 281 \r
 282 <BR>\r
 283 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 284 </TR>\r
 285 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 286 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 287 <CODE>&nbsp;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>\r
 288 <TD><CODE><B>AsyncJobRunner.</B><B><A HREF="../../../compbio/engine/cluster/drmaa/AsyncJobRunner.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 289 \r
 290 <BR>\r
 291 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 292 </TR>\r
 293 </TABLE>\r
 294 &nbsp;\r
 295 <P>\r
 296 <A NAME="compbio.engine.local"><!-- --></A>\r
 297 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 298 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 299 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 300 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/engine/local/package-summary.html">compbio.engine.local</A></FONT></TH>\r
 301 </TR>\r
 302 </TABLE>\r
 303 &nbsp;\r
 304 <P>\r
 305 \r
 306 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 307 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 308 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/local/package-summary.html">compbio.engine.local</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 309 </TR>\r
 310 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 311 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 312 <CODE>static&nbsp;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>\r
 313 <TD><CODE><B>LocalEngineUtil.</B><B><A HREF="../../../compbio/engine/local/LocalEngineUtil.html#getResults(java.util.concurrent.Future, java.lang.String)">getResults</A></B>(java.util.concurrent.Future&lt;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;&gt;&nbsp;future,\r
 314            java.lang.String&nbsp;taskId)</CODE>\r
 315 \r
 316 <BR>\r
 317 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 318 </TR>\r
 319 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 320 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 321 <CODE>&nbsp;<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A>&lt;?&gt;</CODE></FONT></TD>\r
 322 <TD><CODE><B>AsyncLocalRunner.</B><B><A HREF="../../../compbio/engine/local/AsyncLocalRunner.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;taskId)</CODE>\r
 323 \r
 324 <BR>\r
 325 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 326 </TR>\r
 327 </TABLE>\r
 328 &nbsp;\r
 329 <P>\r
 330 <A NAME="compbio.runner.msa"><!-- --></A>\r
 331 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 332 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 333 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 334 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/runner/msa/package-summary.html">compbio.runner.msa</A></FONT></TH>\r
 335 </TR>\r
 336 </TABLE>\r
 337 &nbsp;\r
 338 <P>\r
 339 \r
 340 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 341 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 342 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/runner/msa/package-summary.html">compbio.runner.msa</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 343 </TR>\r
 344 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 345 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 346 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 347 <TD><CODE><B>Tcoffee.</B><B><A HREF="../../../compbio/runner/msa/Tcoffee.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;workDirectory)</CODE>\r
 348 \r
 349 <BR>\r
 350 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 351 </TR>\r
 352 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 353 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 354 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 355 <TD><CODE><B>ClustalW.</B><B><A HREF="../../../compbio/runner/msa/ClustalW.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;workDirectory)</CODE>\r
 356 \r
 357 <BR>\r
 358 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 359 </TR>\r
 360 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 361 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 362 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 363 <TD><CODE><B>Probcons.</B><B><A HREF="../../../compbio/runner/msa/Probcons.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;workDirectory)</CODE>\r
 364 \r
 365 <BR>\r
 366 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 367 </TR>\r
 368 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 369 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 370 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 371 <TD><CODE><B>Muscle.</B><B><A HREF="../../../compbio/runner/msa/Muscle.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;workDirectory)</CODE>\r
 372 \r
 373 <BR>\r
 374 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 375 </TR>\r
 376 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 377 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 378 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 379 <TD><CODE><B>Mafft.</B><B><A HREF="../../../compbio/runner/msa/Mafft.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;workDirectory)</CODE>\r
 380 \r
 381 <BR>\r
 382 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 383 </TR>\r
 384 </TABLE>\r
 385 &nbsp;\r
 386 <P>\r
 387 <A NAME="compbio.runner.psiblast"><!-- --></A>\r
 388 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 389 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 390 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 391 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/runner/psiblast/package-summary.html">compbio.runner.psiblast</A></FONT></TH>\r
 392 </TR>\r
 393 </TABLE>\r
 394 &nbsp;\r
 395 <P>\r
 396 \r
 397 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 398 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 399 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/runner/psiblast/package-summary.html">compbio.runner.psiblast</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 400 </TR>\r
 401 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 402 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 403 <CODE>\r
 404 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="0" SUMMARY="">\r
 405 <TR ALIGN="right" VALIGN="">\r
 406 <TD NOWRAP><FONT SIZE="-1">\r
 407 <CODE>&lt;V&gt; V</CODE></FONT></TD>\r
 408 </TR>\r
 409 </TABLE>\r
 410 </CODE></FONT></TD>\r
 411 <TD><CODE><B>PsiBlast.</B><B><A HREF="../../../compbio/runner/psiblast/PsiBlast.html#getResults(java.lang.String)">getResults</A></B>(java.lang.String&nbsp;directory)</CODE>\r
 412 \r
 413 <BR>\r
 414 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 415 </TR>\r
 416 </TABLE>\r
 417 &nbsp;\r
 418 <P>\r
 419 <A NAME="compbio.ws.server"><!-- --></A>\r
 420 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 421 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 422 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 423 Uses of <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A> in <A HREF="../../../compbio/ws/server/package-summary.html">compbio.ws.server</A></FONT></TH>\r
 424 </TR>\r
 425 </TABLE>\r
 426 &nbsp;\r
 427 <P>\r
 428 \r
 429 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 430 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">\r
 431 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/ws/server/package-summary.html">compbio.ws.server</A> that throw <A HREF="../../../compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata">ResultNotAvailableException</A></FONT></TH>\r
 432 </TR>\r
 433 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 434 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 435 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 436 <TD><CODE><B>TcoffeeWS.</B><B><A HREF="../../../compbio/ws/server/TcoffeeWS.html#getResult(java.lang.String)">getResult</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 437 \r
 438 <BR>\r
 439 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 440 </TR>\r
 441 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 442 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 443 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 444 <TD><CODE><B>ProbconsWS.</B><B><A HREF="../../../compbio/ws/server/ProbconsWS.html#getResult(java.lang.String)">getResult</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 445 \r
 446 <BR>\r
 447 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 448 </TR>\r
 449 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 450 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 451 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 452 <TD><CODE><B>MuscleWS.</B><B><A HREF="../../../compbio/ws/server/MuscleWS.html#getResult(java.lang.String)">getResult</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 453 \r
 454 <BR>\r
 455 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 456 </TR>\r
 457 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 458 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 459 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 460 <TD><CODE><B>MafftWS.</B><B><A HREF="../../../compbio/ws/server/MafftWS.html#getResult(java.lang.String)">getResult</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 461 \r
 462 <BR>\r
 463 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 464 </TR>\r
 465 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 466 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 467 <CODE>&nbsp;<A HREF="../../../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A></CODE></FONT></TD>\r
 468 <TD><CODE><B>ClustalWS.</B><B><A HREF="../../../compbio/ws/server/ClustalWS.html#getResult(java.lang.String)">getResult</A></B>(java.lang.String&nbsp;jobId)</CODE>\r
 469 \r
 470 <BR>\r
 471 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 472 </TR>\r
 473 </TABLE>\r
 474 &nbsp;\r
 475 <P>\r
 476 <HR>\r
 477 \r
 478 \r
 479 <!-- ======= START OF BOTTOM NAVBAR ====== -->\r
 480 <A NAME="navbar_bottom"><!-- --></A>\r
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 483 <TR>\r
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 485 <A NAME="navbar_bottom_firstrow"><!-- --></A>\r
 486 <TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">\r
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 488   <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>\r
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 509   <A HREF="../../../index.html?compbio/metadata/\class-useResultNotAvailableException.html" target="_top"><B>FRAMES</B></A>  &nbsp;\r
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