website/full_javadoc/compbio/stat/collector/ExecutionStatCollector.html

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  79   SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_summary">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD>\r
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  91 compbio.stat.collector</FONT>\r
  92 <BR>\r
  93 Class ExecutionStatCollector</H2>\r
  94 <PRE>\r
  95 <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">java.lang.Object</A>\r
  96   <IMG SRC="../../../resources/inherit.gif" ALT="extended by "><B>compbio.stat.collector.ExecutionStatCollector</B>\r
  97 </PRE>\r
  98 <DL>\r
  99 <DT><B>All Implemented Interfaces:</B> <DD><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Runnable.html?is-external=true" title="class or interface in java.lang">Runnable</A></DD>\r
 100 </DL>\r
 101 <HR>\r
 102 <DL>\r
 103 <DT><PRE>public class <B>ExecutionStatCollector</B><DT>extends <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</A><DT>implements <A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Runnable.html?is-external=true" title="class or interface in java.lang">Runnable</A></DL>\r
 104 </PRE>\r
 105 \r
 106 <P>\r
 107 Number of runs of each WS = number of folders with name
 108
 109  Number of successful runs = all runs with no result file
 110
 111  Per period of time = limit per file creating time Runtime (avg/max) =
 112
 113  started time - finished time
 114
 115  Task & result size = result.size
 116
 117  Abandoned runs - not collected runs
 118
 119  Cancelled runs - cancelled
 120
 121  Cluster vs local runs
 122
 123  Reasons for failure = look in the err out?
 124
 125
 126  Metadata required:
 127
 128  work directory for local and cluster tasks = from Helper or cmd parameter. WS
 129  names - enumeration. Status file names and content.\r
 130 <P>\r
 131 \r
 132 <P>\r
 133 <DL>\r
 134 <DT><B>Author:</B></DT>\r
 135   <DD>pvtroshin</DD>\r
 136 </DL>\r
 137 <HR>\r
 138 \r
 139 <P>\r
 140 \r
 141 <!-- ======== CONSTRUCTOR SUMMARY ======== -->\r
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 147 <B>Constructor Summary</B></FONT></TH>\r
 148 </TR>\r
 149 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 150 <TD><CODE><B><A HREF="../../../compbio/stat/collector/ExecutionStatCollector.html#ExecutionStatCollector(java.lang.String, int)">ExecutionStatCollector</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;workDirectory,\r
 151                        int&nbsp;timeOutInHours)</CODE>\r
 152 \r
 153 <BR>\r
 154 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;List subdirectories in the job directory</TD>\r
 155 </TR>\r
 156 </TABLE>\r
 157 &nbsp;\r
 158 <!-- ========== METHOD SUMMARY =========== -->\r
 159 \r
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 166 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 167 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
 168 <CODE>static&nbsp;void</CODE></FONT></TD>\r
 169 <TD><CODE><B><A HREF="../../../compbio/stat/collector/ExecutionStatCollector.html#main(java.lang.String[])">main</A></B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>[]&nbsp;args)</CODE>\r
 170 \r
 171 <BR>\r
 172 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Not in use</TD>\r
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 176 <CODE>&nbsp;void</CODE></FONT></TD>\r
 177 <TD><CODE><B><A HREF="../../../compbio/stat/collector/ExecutionStatCollector.html#run()">run</A></B>()</CODE>\r
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 190 </TR>\r
 191 </TABLE>\r
 192 &nbsp;\r
 193 <P>\r
 194 \r
 195 <!-- ========= CONSTRUCTOR DETAIL ======== -->\r
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 201 <B>Constructor Detail</B></FONT></TH>\r
 202 </TR>\r
 203 </TABLE>\r
 204 \r
 205 <A NAME="ExecutionStatCollector(java.lang.String, int)"><!-- --></A><H3>\r
 206 ExecutionStatCollector</H3>\r
 207 <PRE>\r
 208 public <B>ExecutionStatCollector</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>&nbsp;workDirectory,\r
 209                               int&nbsp;timeOutInHours)</PRE>\r
 210 <DL>\r
 211 <DD>List subdirectories in the job directory\r
 212 <P>\r
 213 <DL>\r
 214 <DT><B>Parameters:</B><DD><CODE>workDirectory</CODE> - <DD><CODE>timeOutInHours</CODE> - </DL>\r
 215 </DL>\r
 216 \r
 217 <!-- ============ METHOD DETAIL ========== -->\r
 218 \r
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 223 <B>Method Detail</B></FONT></TH>\r
 224 </TR>\r
 225 </TABLE>\r
 226 \r
 227 <A NAME="main(java.lang.String[])"><!-- --></A><H3>\r
 228 main</H3>\r
 229 <PRE>\r
 230 public static void <B>main</B>(<A HREF="http://java.sun.com/javase/6/docs/api/java/lang/String.html?is-external=true" title="class or interface in java.lang">String</A>[]&nbsp;args)\r
 231                  throws <A HREF="http://java.sun.com/javase/6/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</A>,\r
 232                         <A HREF="http://java.sun.com/javase/6/docs/api/java/sql/SQLException.html?is-external=true" title="class or interface in java.sql">SQLException</A></PRE>\r
 233 <DL>\r
 234 <DD>Not in use\r
 235 <P>\r
 236 <DD><DL>\r
 237 </DL>\r
 238 </DD>\r
 239 <DD><DL>\r
 240 \r
 241 <DT><B>Throws:</B>\r
 242 <DD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</A></CODE>\r
 243 <DD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/sql/SQLException.html?is-external=true" title="class or interface in java.sql">SQLException</A></CODE></DL>\r
 244 </DD>\r
 245 </DL>\r
 246 <HR>\r
 247 \r
 248 <A NAME="run()"><!-- --></A><H3>\r
 249 run</H3>\r
 250 <PRE>\r
 251 public void <B>run</B>()</PRE>\r
 252 <DL>\r
 253 <DD><DL>\r
 254 <DT><B>Specified by:</B><DD><CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Runnable.html?is-external=true#run()" title="class or interface in java.lang">run</A></CODE> in interface <CODE><A HREF="http://java.sun.com/javase/6/docs/api/java/lang/Runnable.html?is-external=true" title="class or interface in java.lang">Runnable</A></CODE></DL>\r
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