website/full_javadoc/deprecated-list.html

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   5 <!-- Generated by javadoc (build 1.6.0_24) on Fri Aug 12 14:32:36 BST 2011 -->\r
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   7 Deprecated List\r
   8 </TITLE>\r
   9 \r
  10 <META NAME="date" CONTENT="2011-08-12">\r
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  18         parent.document.title="Deprecated List";\r
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  45   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Deprecated</B></FONT>&nbsp;</TD>\r
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  80 \r
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  83 <H2>\r
  84 <B>Deprecated API</B></H2>\r
  85 </CENTER>\r
  86 <HR SIZE="4" NOSHADE>\r
  87 <B>Contents</B><UL>\r
  88 <LI><A HREF="#class">Deprecated Classes</A>\r
  89 <LI><A HREF="#enum">Deprecated Enums</A>\r
  90 <LI><A HREF="#method">Deprecated Methods</A>\r
  91 </UL>\r
  92 \r
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  96 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
  97 <B>Deprecated Classes</B></FONT></TH>\r
  98 </TR>\r
  99 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 100 <TD><A HREF="compbio/engine/conf/_Key.html" title="class in compbio.engine.conf">compbio.engine.conf._Key</A>\r
 101 <BR>\r
 102 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 103 </TR>\r
 104 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 105 <TD><A HREF="compbio/runner/_NativeSpecHelper.html" title="class in compbio.runner">compbio.runner._NativeSpecHelper</A>\r
 106 <BR>\r
 107 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 108 </TR>\r
 109 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 110 <TD><A HREF="compbio/runner/_SkeletalCommandBuilder.html" title="class in compbio.runner">compbio.runner._SkeletalCommandBuilder</A>\r
 111 <BR>\r
 112 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 113 </TR>\r
 114 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 115 <TD><A HREF="compbio/ws/server/_WSLogger.html" title="class in compbio.ws.server">compbio.ws.server._WSLogger</A>\r
 116 <BR>\r
 117 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 118 </TR>\r
 119 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 120 <TD><A HREF="compbio/engine/Cleaner.html" title="class in compbio.engine">compbio.engine.Cleaner</A>\r
 121 <BR>\r
 122 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 123 </TR>\r
 124 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 125 <TD><A HREF="compbio/ws/server/SimpleWSPublisher.html" title="class in compbio.ws.server">compbio.ws.server.SimpleWSPublisher</A>\r
 126 <BR>\r
 127 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 128 </TR>\r
 129 </TABLE>\r
 130 &nbsp;\r
 131 <P>\r
 132 <A NAME="enum"><!-- --></A>\r
 133 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 134 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 135 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 136 <B>Deprecated Enums</B></FONT></TH>\r
 137 </TR>\r
 138 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 139 <TD><A HREF="compbio/engine/cluster/dundee/_Queue.html" title="enum in compbio.engine.cluster.dundee">compbio.engine.cluster.dundee._Queue</A>\r
 140 <BR>\r
 141 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 142 </TR>\r
 143 </TABLE>\r
 144 &nbsp;\r
 145 <P>\r
 146 <A NAME="method"><!-- --></A>\r
 147 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
 148 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
 149 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
 150 <B>Deprecated Methods</B></FONT></TH>\r
 151 </TR>\r
 152 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 153 <TD><A HREF="compbio/engine/client/Executable.html#getCreatedFiles()">compbio.engine.client.Executable.getCreatedFiles()</A>\r
 154 <BR>\r
 155 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 156 </TR>\r
 157 <TR BGCOLOR="white" CLASS="TableRowColor">\r
 158 <TD><A HREF="compbio/engine/cluster/drmaa/ClusterSession.html#getJobStatus(int)">compbio.engine.cluster.drmaa.ClusterSession.getJobStatus(int)</A>\r
 159 <BR>\r
 160 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>\r
 161 </TR>\r
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 182   <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Deprecated</B></FONT>&nbsp;</TD>\r
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