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  83 <B>H</B></H2>\r
  84 <DL>\r
  85 <DT><A HREF="../compbio/engine/cluster/drmaa/StatisticManager.html#hasDump()"><B>hasDump()</B></A> - \r
  86 Method in class compbio.engine.cluster.drmaa.<A HREF="../compbio/engine/cluster/drmaa/StatisticManager.html" title="class in compbio.engine.cluster.drmaa">StatisticManager</A>\r
  87 <DD>&nbsp;\r
  88 <DT><A HREF="../compbio/engine/cluster/drmaa/StatisticManager.html#hasExited()"><B>hasExited()</B></A> - \r
  89 Method in class compbio.engine.cluster.drmaa.<A HREF="../compbio/engine/cluster/drmaa/StatisticManager.html" title="class in compbio.engine.cluster.drmaa">StatisticManager</A>\r
  90 <DD>&nbsp;\r
  91 <DT><A HREF="../compbio/data/sequence/Alignment.html#hashCode()"><B>hashCode()</B></A> - \r
  92 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</A>\r
  93 <DD>&nbsp;\r
  94 <DT><A HREF="../compbio/data/sequence/AlignmentMetadata.html#hashCode()"><B>hashCode()</B></A> - \r
  95 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/AlignmentMetadata.html" title="class in compbio.data.sequence">AlignmentMetadata</A>\r
  96 <DD>&nbsp;\r
  97 <DT><A HREF="../compbio/data/sequence/FastaSequence.html#hashCode()"><B>hashCode()</B></A> - \r
  98 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/FastaSequence.html" title="class in compbio.data.sequence">FastaSequence</A>\r
  99 <DD>&nbsp;\r
 100 <DT><A HREF="../compbio/data/sequence/Range.html#hashCode()"><B>hashCode()</B></A> - \r
 101 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</A>\r
 102 <DD>&nbsp;\r
 103 <DT><A HREF="../compbio/data/sequence/Score.html#hashCode()"><B>hashCode()</B></A> - \r
 104 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/Score.html" title="class in compbio.data.sequence">Score</A>\r
 105 <DD>&nbsp;\r
 106 <DT><A HREF="../compbio/data/sequence/ScoreManager.html#hashCode()"><B>hashCode()</B></A> - \r
 107 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/ScoreManager.html" title="class in compbio.data.sequence">ScoreManager</A>\r
 108 <DD>&nbsp;\r
 109 <DT><A HREF="../compbio/data/sequence/ScoreManager.ScoreHolder.html#hashCode()"><B>hashCode()</B></A> - \r
 110 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/ScoreManager.ScoreHolder.html" title="class in compbio.data.sequence">ScoreManager.ScoreHolder</A>\r
 111 <DD>&nbsp;\r
 112 <DT><A HREF="../compbio/engine/client/CommandBuilder.html#hashCode()"><B>hashCode()</B></A> - \r
 113 Method in class compbio.engine.client.<A HREF="../compbio/engine/client/CommandBuilder.html" title="class in compbio.engine.client">CommandBuilder</A>\r
 114 <DD>&nbsp;\r
 115 <DT><A HREF="../compbio/engine/client/RunConfiguration.html#hashCode()"><B>hashCode()</B></A> - \r
 116 Method in class compbio.engine.client.<A HREF="../compbio/engine/client/RunConfiguration.html" title="class in compbio.engine.client">RunConfiguration</A>\r
 117 <DD>&nbsp;\r
 118 <DT><A HREF="../compbio/engine/client/SkeletalExecutable.html#hashCode()"><B>hashCode()</B></A> - \r
 119 Method in class compbio.engine.client.<A HREF="../compbio/engine/client/SkeletalExecutable.html" title="class in compbio.engine.client">SkeletalExecutable</A>\r
 120 <DD>&nbsp;\r
 121 <DT><A HREF="../compbio/engine/ClusterJobId.html#hashCode()"><B>hashCode()</B></A> - \r
 122 Method in class compbio.engine.<A HREF="../compbio/engine/ClusterJobId.html" title="class in compbio.engine">ClusterJobId</A>\r
 123 <DD>&nbsp;\r
 124 <DT><A HREF="../compbio/engine/conf/_Key.html#hashCode()"><B>hashCode()</B></A> - \r
 125 Method in class compbio.engine.conf.<A HREF="../compbio/engine/conf/_Key.html" title="class in compbio.engine.conf">_Key</A>\r
 126 <DD><B>Deprecated.</B>&nbsp;&nbsp;\r
 127 <DT><A HREF="../compbio/engine/FilePuller.html#hashCode()"><B>hashCode()</B></A> - \r
 128 Method in class compbio.engine.<A HREF="../compbio/engine/FilePuller.html" title="class in compbio.engine">FilePuller</A>\r
 129 <DD>&nbsp;\r
 130 <DT><A HREF="../compbio/engine/Job.html#hashCode()"><B>hashCode()</B></A> - \r
 131 Method in class compbio.engine.<A HREF="../compbio/engine/Job.html" title="class in compbio.engine">Job</A>\r
 132 <DD>&nbsp;\r
 133 <DT><A HREF="../compbio/metadata/ChunkHolder.html#hashCode()"><B>hashCode()</B></A> - \r
 134 Method in class compbio.metadata.<A HREF="../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</A>\r
 135 <DD>&nbsp;\r
 136 <DT><A HREF="../compbio/metadata/Limit.html#hashCode()"><B>hashCode()</B></A> - \r
 137 Method in class compbio.metadata.<A HREF="../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A>\r
 138 <DD>&nbsp;\r
 139 <DT><A HREF="../compbio/metadata/Option.html#hashCode()"><B>hashCode()</B></A> - \r
 140 Method in class compbio.metadata.<A HREF="../compbio/metadata/Option.html" title="class in compbio.metadata">Option</A>\r
 141 <DD>&nbsp;\r
 142 <DT><A HREF="../compbio/metadata/Parameter.html#hashCode()"><B>hashCode()</B></A> - \r
 143 Method in class compbio.metadata.<A HREF="../compbio/metadata/Parameter.html" title="class in compbio.metadata">Parameter</A>\r
 144 <DD>&nbsp;\r
 145 <DT><A HREF="../compbio/metadata/Preset.html#hashCode()"><B>hashCode()</B></A> - \r
 146 Method in class compbio.metadata.<A HREF="../compbio/metadata/Preset.html" title="class in compbio.metadata">Preset</A>\r
 147 <DD>&nbsp;\r
 148 <DT><A HREF="../compbio/metadata/ValueConstrain.html#hashCode()"><B>hashCode()</B></A> - \r
 149 Method in class compbio.metadata.<A HREF="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata">ValueConstrain</A>\r
 150 <DD>&nbsp;\r
 151 <DT><A HREF="../compbio/pipeline/_jpred/Hit.html#hashCode()"><B>hashCode()</B></A> - \r
 152 Method in class compbio.pipeline._jpred.<A HREF="../compbio/pipeline/_jpred/Hit.html" title="class in compbio.pipeline._jpred">Hit</A>\r
 153 <DD>&nbsp;\r
 154 <DT><A HREF="../compbio/pipeline/_jpred/PScore.html#hashCode()"><B>hashCode()</B></A> - \r
 155 Method in class compbio.pipeline._jpred.<A HREF="../compbio/pipeline/_jpred/PScore.html" title="class in compbio.pipeline._jpred">PScore</A>\r
 156 <DD>&nbsp;\r
 157 <DT><A HREF="../compbio/stat/collector/JobStat.html#hashCode()"><B>hashCode()</B></A> - \r
 158 Method in class compbio.stat.collector.<A HREF="../compbio/stat/collector/JobStat.html" title="class in compbio.stat.collector">JobStat</A>\r
 159 <DD>&nbsp;\r
 160 <DT><A HREF="../compbio/stat/servlet/util/StatCollection.html#hashCode()"><B>hashCode()</B></A> - \r
 161 Method in class compbio.stat.servlet.util.<A HREF="../compbio/stat/servlet/util/StatCollection.html" title="class in compbio.stat.servlet.util">StatCollection</A>\r
 162 <DD>&nbsp;\r
 163 <DT><A HREF="../compbio/engine/FilePuller.html#hasMoreData()"><B>hasMoreData()</B></A> - \r
 164 Method in class compbio.engine.<A HREF="../compbio/engine/FilePuller.html" title="class in compbio.engine">FilePuller</A>\r
 165 <DD>&nbsp;\r
 166 <DT><A HREF="../compbio/data/sequence/FastaReader.html#hasNext()"><B>hasNext()</B></A> - \r
 167 Method in class compbio.data.sequence.<A HREF="../compbio/data/sequence/FastaReader.html" title="class in compbio.data.sequence">FastaReader</A>\r
 168 <DD>\r
 169 <DT><A HREF="../compbio/engine/client/CommandBuilder.html#hasParam(java.lang.String)"><B>hasParam(String)</B></A> - \r
 170 Method in class compbio.engine.client.<A HREF="../compbio/engine/client/CommandBuilder.html" title="class in compbio.engine.client">CommandBuilder</A>\r
 171 <DD>&nbsp;\r
 172 <DT><A HREF="../compbio/stat/collector/JobStat.html#hasResult()"><B>hasResult()</B></A> - \r
 173 Method in class compbio.stat.collector.<A HREF="../compbio/stat/collector/JobStat.html" title="class in compbio.stat.collector">JobStat</A>\r
 174 <DD>&nbsp;\r
 175 <DT><A HREF="../compbio/engine/cluster/drmaa/StatisticManager.html#hasSignaled()"><B>hasSignaled()</B></A> - \r
 176 Method in class compbio.engine.cluster.drmaa.<A HREF="../compbio/engine/cluster/drmaa/StatisticManager.html" title="class in compbio.engine.cluster.drmaa">StatisticManager</A>\r
 177 <DD>&nbsp;\r
 178 <DT><A HREF="../compbio/stat/collector/JobStat.html#hasStarted()"><B>hasStarted()</B></A> - \r
 179 Method in class compbio.stat.collector.<A HREF="../compbio/stat/collector/JobStat.html" title="class in compbio.stat.collector">JobStat</A>\r
 180 <DD>&nbsp;\r
 181 <DT><A HREF="../compbio/engine/cluster/dundee/_Queue.html#hasTimeLimit()"><B>hasTimeLimit()</B></A> - \r
 182 Method in enum compbio.engine.cluster.dundee.<A HREF="../compbio/engine/cluster/dundee/_Queue.html" title="enum in compbio.engine.cluster.dundee">_Queue</A>\r
 183 <DD><B>Deprecated.</B>&nbsp;&nbsp;\r
 184 <DT><A HREF="../compbio/pipeline/_jpred/Hit.html" title="class in compbio.pipeline._jpred"><B>Hit</B></A> - Class in <A HREF="../compbio/pipeline/_jpred/package-summary.html">compbio.pipeline._jpred</A><DD>&nbsp;<DT><A HREF="../compbio/pipeline/_jpred/Hit.html#Hit()"><B>Hit()</B></A> - \r
 185 Constructor for class compbio.pipeline._jpred.<A HREF="../compbio/pipeline/_jpred/Hit.html" title="class in compbio.pipeline._jpred">Hit</A>\r
 186 <DD>&nbsp;\r
 187 <DT><A HREF="../compbio/pipeline/_jpred/Hit.EvalueComporator.html" title="class in compbio.pipeline._jpred"><B>Hit.EvalueComporator</B></A> - Class in <A HREF="../compbio/pipeline/_jpred/package-summary.html">compbio.pipeline._jpred</A><DD>&nbsp;<DT><A HREF="../compbio/pipeline/_jpred/Hit.EvalueComporator.html#Hit.EvalueComporator()"><B>Hit.EvalueComporator()</B></A> - \r
 188 Constructor for class compbio.pipeline._jpred.<A HREF="../compbio/pipeline/_jpred/Hit.EvalueComporator.html" title="class in compbio.pipeline._jpred">Hit.EvalueComporator</A>\r
 189 <DD>&nbsp;\r
 190 <DT><A HREF="../compbio/pipeline/_jpred/Hit.NumberComporator.html" title="class in compbio.pipeline._jpred"><B>Hit.NumberComporator</B></A> - Class in <A HREF="../compbio/pipeline/_jpred/package-summary.html">compbio.pipeline._jpred</A><DD>&nbsp;<DT><A HREF="../compbio/pipeline/_jpred/Hit.NumberComporator.html#Hit.NumberComporator()"><B>Hit.NumberComporator()</B></A> - \r
 191 Constructor for class compbio.pipeline._jpred.<A HREF="../compbio/pipeline/_jpred/Hit.NumberComporator.html" title="class in compbio.pipeline._jpred">Hit.NumberComporator</A>\r
 192 <DD>&nbsp;\r
 193 </DL>\r
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