website/template_header.jsp

   1 <!DOCTYPE html>
   2 <html lang="en">
   3
   4 <!-- Header for BG group pages - different for each page... -->
   5 <head id="top">
   6     <meta http-equiv="content-type" content="text/html; charset=UTF-8">
   7     <meta charset="utf-8">
   8     <!--<meta http-equiv="X-UA-Compatible" content="IE=edge">-->
   9     <meta name="viewport" content="width=device-width, initial-scale=1.0">
  10
  11     <meta name="description" content="Java Bioinformatics Analyses Web Services (JABAWS) at the Barton Group -
  12                                         Bioinformatics Research Group in the Division of Computational Biology,
  13                                         School of Life Sciences, University of Dundee, UK.">
  14     <meta name="author" content="Fábio Madeira (v2.2)">
  15
  16     <title>JABAWS | Java Bioinformatics Analyses Web Services (JABAWS) | ${param.title}</title>
  17
  18     <!-- Header section of BG website pages - includes navbar and logos  must be used with an h2-xxxx.html file before -->
  19
  20     <!-- Google Analytics -->
  21     <script>
  22         (function(i, s, o, g, r, a, m) {
  23             i['GoogleAnalyticsObject'] = r;
  24             i[r] = i[r] ||
  25                 function() {
  26                     (i[r].q = i[r].q || []).push(arguments)
  27                 }, i[r].l = 1 * new Date();
  28             a = s.createElement(o), m = s.getElementsByTagName(o)[0];
  29             a.async = 1;
  30             a.src = g;
  31             m.parentNode.insertBefore(a, m)
  32         })(window, document, 'script', 'https://www.google-analytics.com/analytics.js', 'ga');
  33
  34         ga('create', 'UA-5356328-1', 'auto');
  35         ga('send', 'pageview');
  36     </script>
  37     <!-- End Google Analytics -->
  38
  39     <link rel="shortcut icon" href="${pageContext.request.contextPath}/static/img/BG_intense2_small.ico">
  40     <%--<!-- Bootstrap core CSS -->--%>
  41     <link href="${pageContext.request.contextPath}/static/css/bootstrap.min.css" rel="stylesheet">
  42     <link href="${pageContext.request.contextPath}/static/css/font-awesome.min.css" rel="stylesheet">
  43     <%--&lt;%&ndash;<!-- Barton Group specific CSS -->&ndash;%&gt;--%>
  44     <link href="${pageContext.request.contextPath}/static/css/main.css" rel="stylesheet">
  45     <link rel="stylesheet" href="//cdnjs.cloudflare.com/ajax/libs/highlight.js/9.9.0/styles/default.min.css">
  46     ${param.html_custom_css}
  47     ${param.html_custom_js}
  48
  49 </head>
  50 <!--/navbar and header -->
  51
  52
  53 <body>
  54 <hr />
  55 <!-- BG header part -->
  56 <div class="container" id="mainpage">
  57     <div class="row">
  58         <div class="col-md-1 col-xs-1 text-left"></div>
  59         <div class="col-md-2 col-xs-2 text-left">
  60             <a href="http://www.compbio.dundee.ac.uk/"><img src="${pageContext.request.contextPath}/static/img/BG_with_text.svg" style="width:80%;height:80%" alt="Barton Group Logo"></a>
  61         </div>
  62         <div class="col-md-2 col-xs-2 text-left">
  63             <a href="http://www.dundee.ac.uk"><img src="${pageContext.request.contextPath}/static/img/University_white_logo.svg" style="width:90%;height:90%" alt="University of Dundee Logo"></a>
  64         </div>
  65         <div class="col-md-6 col-xs-6 text-left">
  66             <a href="${pageContext.request.contextPath}/"><img src="${pageContext.request.contextPath}/static/img/jabaws2.2.svg" style="width:100%;height:100%" alt="Barton Group Banner"></a>
  67         </div>
  68         <div class="col-md-1 col-xs-1 text-left"></div>
  69         <!--<div class="col-md-1 col-xs-1 text-left"></div>-->
  70         <!--<div class="col-md-10 col-xs-10 text-left">-->
  71         <!--<img src="static/jabaws2.2_header.svg" style="width:100%;height:100%" alt="Barton Group Banner">-->
  72         <!--</div>-->
  73         <!--<div class="col-md-2 col-xs-2 text-left"></div>-->
  74     </div>
  75 </div>
  76 <!--navbar region  -->
  77 <div class="navbar navbar-default" role="navigation">
  78     <div class="container">
  79         <div class="navbar-header">
  80             <button type="button" class="navbar-toggle" data-toggle="collapse" data-target=".navbar-collapse">
  81                 <span class="sr-only">Toggle navigation</span>
  82                 <span class="icon-bar"></span>
  83                 <span class="icon-bar"></span>
  84                 <span class="icon-bar"></span>
  85             </button>
  86         </div>
  87         <div class="collapse navbar-collapse">
  88             <ul class="nav navbar-nav">
  89                 <li>
  90                     <a href="${pageContext.request.contextPath}/"><i class="fa fa-home" aria-hidden="true"></i> Home</a>
  91                 </li>
  92                 <li>
  93                     <a href="${pageContext.request.contextPath}/getting_started.jsp" ><i class="fa fa-fighter-jet" aria-hidden="true"></i> Getting Started</a>
  94                 </li>
  95
  96                 <li>
  97                     <a href="${pageContext.request.contextPath}/download.jsp" ><i class="fa fa-download" aria-hidden="true"></i> Download</a>
  98                 </li>
  99
 100                 <li class="dropdown">
 101                     <a href="${pageContext.request.contextPath}/man_about.jsp" class="dropdown-toggle" data-toggle="dropdown">
 102                         <i class="fa fa-file-text-o" aria-hidden="true"></i> Documentation<b class="caret"></b></a>
 103
 104                     <ul class="dropdown-menu">
 105                         <li>
 106                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/getting_started.html">Getting Started</a>
 107                         </li>
 108                         <li>
 109                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/included_tools.html">Included Tools</a>
 110                         </li>
 111                         <li class="divider"></li>
 112                        <li>
 113                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/client.html">Command Line Client (CLI)</a>
 114                         </li>
 115                         <li>
 116                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/war.html">Web Application Archive (WAR)</a>
 117                         </li>
 118                         <li>
 119                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/va.html">Virtual Appliance (VA)</a>
 120                         </li>
 121                         <li class="divider"></li>
 122                         <li>
 123                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/advanced.html">Advanced Usage</a>
 124                         </li>
 125                         <li>
 126                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/develop.html">For Developers</a>
 127                         </li>
 128                         <li class="divider"></li>
 129                         <li>
 130                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/changelog.html">Changelog</a>
 131                         </li>
 132                         <li>
 133                             <a href="${pageContext.request.contextPath}/docs/v_2_2_0/stats.html">Usage Statistics</a>
 134                         </li>
 135                         <li class="divider"></li>
 136                         <li>
 137                             <a href="${pageContext.request.contextPath}/docs/full_javadoc/">Complete JavaDoc</a>
 138                         </li>
 139                         <li>
 140                             <a href="${pageContext.request.contextPath}/docs/dm_javadoc/">Data Model JavaDoc</a>
 141                         </li>
 142                     </ul>
 143                 </li>
 144                 <li>
 145                     <a href="${pageContext.request.contextPath}/ServiceStatus"
 146                        title="JABAWS webservices status. Click to test all web services. Please be patient while the services are being checked"
 147                        id="show_hidden1">
 148                         <i class="fa fa-cogs" aria-hidden="true"></i> Service Status</a>
 149                 </li>
 150                 <li>
 151                     <a href="${pageContext.request.contextPath}/PublicAnnualStat" title="JABAWS server usage statistics" id="show_hidden2">
 152                         <i class="fa fa-bar-chart" aria-hidden="true"></i> Usage Statistics</a>
 153                 </li>
 154                 <!--Includes funding and contacts (v2.2)-->
 155                 <li>
 156                     <a href="${pageContext.request.contextPath}/about.jsp" ><i class="fa fa-info-circle" aria-hidden="true"></i> About</a>
 157                 </li>
 158             </ul>
 159         </div><!--/.nav-collapse -->
 160     </div>
 161 </div>
 162 <!--/navbar and header -->
 163
 164 <!--body -->
 165 <div class="container">
 166     <div class="row">
 167         <div class="col-md-3"></div>
 168         <div class="col-md-6">
 169             <div class="center-block">
 170                 <hidden_loader style="display:none;">
 171                     <div class="alert alert-warning" role="alert">
 172                         <p style="text-align: center; font-size: 15px">
 173                             <img src="${pageContext.request.contextPath}/static/img/loader.gif" style="width:7%;height:7%">
 174                             &nbsp;&nbsp;&nbsp;&nbsp;This call may take a while to be served...
 175                         </p>
 176                     </div>
 177                 </hidden_loader>
 178             </div>
 179         </div>
 180         <div class="col-md-3"></div>
 181     </div>