wsbuild.log

   1
   2 build-server:
   3    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/AAConWS.wsdl
   4    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/AAConWS_schema1.xsd
   5    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JpredWS.wsdl
   6    [delete] Deleting /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource/JpredWS_schema1.xsd
   7     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.JpredWS
   8     [wsgen] Note:       ap round: 1
   9     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
  10     [wsgen] [should process method: align hasWebMethods: false ]
  11     [wsgen] [endpointReferencesInterface: true]
  12     [wsgen] [declaring class has WebSevice: true]
  13     [wsgen] [returning: true]
  14     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
  15     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  16     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
  17     [wsgen] [should process method: customAlign hasWebMethods: false ]
  18     [wsgen] [endpointReferencesInterface: true]
  19     [wsgen] [declaring class has WebSevice: true]
  20     [wsgen] [returning: true]
  21     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
  22     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  23     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
  24     [wsgen] [should process method: presetAlign hasWebMethods: false ]
  25     [wsgen] [endpointReferencesInterface: true]
  26     [wsgen] [declaring class has WebSevice: true]
  27     [wsgen] [returning: true]
  28     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
  29     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  30     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
  31     [wsgen] [should process method: getResult hasWebMethods: false ]
  32     [wsgen] [endpointReferencesInterface: true]
  33     [wsgen] [declaring class has WebSevice: true]
  34     [wsgen] [returning: true]
  35     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
  36     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
  37     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
  38     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
  39     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
  40     [wsgen] [should process method: cancelJob hasWebMethods: false ]
  41     [wsgen] [endpointReferencesInterface: true]
  42     [wsgen] [declaring class has WebSevice: false]
  43     [wsgen] [returning: true]
  44     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
  45     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
  46     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
  47     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
  48     [wsgen] [endpointReferencesInterface: true]
  49     [wsgen] [declaring class has WebSevice: false]
  50     [wsgen] [returning: true]
  51     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
  52     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
  53     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
  54     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
  55     [wsgen] [endpointReferencesInterface: true]
  56     [wsgen] [declaring class has WebSevice: false]
  57     [wsgen] [returning: true]
  58     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
  59     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
  60     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
  61     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
  62     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
  63     [wsgen] [endpointReferencesInterface: true]
  64     [wsgen] [declaring class has WebSevice: false]
  65     [wsgen] [returning: true]
  66     [wsgen] [WrapperGen - method: getRunnerOptions()]
  67     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
  68     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
  69     [wsgen] [should process method: getPresets hasWebMethods: false ]
  70     [wsgen] [endpointReferencesInterface: true]
  71     [wsgen] [declaring class has WebSevice: false]
  72     [wsgen] [returning: true]
  73     [wsgen] [WrapperGen - method: getPresets()]
  74     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
  75     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
  76     [wsgen] [should process method: getLimit hasWebMethods: false ]
  77     [wsgen] [endpointReferencesInterface: true]
  78     [wsgen] [declaring class has WebSevice: false]
  79     [wsgen] [returning: true]
  80     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
  81     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
  82     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
  83     [wsgen] [should process method: getLimits hasWebMethods: false ]
  84     [wsgen] [endpointReferencesInterface: true]
  85     [wsgen] [declaring class has WebSevice: false]
  86     [wsgen] [returning: true]
  87     [wsgen] [WrapperGen - method: getLimits()]
  88     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
  89     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
  90     [wsgen] compbio/data/msa/jaxws/Align.java
  91     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
  92     [wsgen] compbio/data/msa/jaxws/CancelJob.java
  93     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
  94     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
  95     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
  96     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
  97     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
  98     [wsgen] compbio/data/msa/jaxws/GetLimit.java
  99     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 100     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 101     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 102     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 103     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 104     [wsgen] compbio/data/msa/jaxws/GetResult.java
 105     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 106     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 107     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 108     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 109     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 110     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 111     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 112     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 113     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 114     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 115     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 116     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 117     [wsgen] Note:       ap round: 2
 118     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.AAConWS
 119     [wsgen] Note:       ap round: 1
 120     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
 121     [wsgen] [should process method: analize hasWebMethods: false ]
 122     [wsgen] [endpointReferencesInterface: true]
 123     [wsgen] [declaring class has WebSevice: true]
 124     [wsgen] [returning: true]
 125     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
 126     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 127     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
 128     [wsgen] [should process method: customAnalize hasWebMethods: false ]
 129     [wsgen] [endpointReferencesInterface: true]
 130     [wsgen] [declaring class has WebSevice: true]
 131     [wsgen] [returning: true]
 132     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 133     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 134     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
 135     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
 136     [wsgen] [endpointReferencesInterface: true]
 137     [wsgen] [declaring class has WebSevice: true]
 138     [wsgen] [returning: true]
 139     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 140     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 141     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
 142     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
 143     [wsgen] [endpointReferencesInterface: true]
 144     [wsgen] [declaring class has WebSevice: true]
 145     [wsgen] [returning: true]
 146     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
 147     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 148     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
 149     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 150     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 151     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 152     [wsgen] [endpointReferencesInterface: true]
 153     [wsgen] [declaring class has WebSevice: false]
 154     [wsgen] [returning: true]
 155     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 156     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 157     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 158     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 159     [wsgen] [endpointReferencesInterface: true]
 160     [wsgen] [declaring class has WebSevice: false]
 161     [wsgen] [returning: true]
 162     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 163     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 164     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 165     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 166     [wsgen] [endpointReferencesInterface: true]
 167     [wsgen] [declaring class has WebSevice: false]
 168     [wsgen] [returning: true]
 169     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 170     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 171     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 172     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 173     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 174     [wsgen] [endpointReferencesInterface: true]
 175     [wsgen] [declaring class has WebSevice: false]
 176     [wsgen] [returning: true]
 177     [wsgen] [WrapperGen - method: getRunnerOptions()]
 178     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 179     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 180     [wsgen] [should process method: getPresets hasWebMethods: false ]
 181     [wsgen] [endpointReferencesInterface: true]
 182     [wsgen] [declaring class has WebSevice: false]
 183     [wsgen] [returning: true]
 184     [wsgen] [WrapperGen - method: getPresets()]
 185     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 186     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 187     [wsgen] [should process method: getLimit hasWebMethods: false ]
 188     [wsgen] [endpointReferencesInterface: true]
 189     [wsgen] [declaring class has WebSevice: false]
 190     [wsgen] [returning: true]
 191     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 192     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 193     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 194     [wsgen] [should process method: getLimits hasWebMethods: false ]
 195     [wsgen] [endpointReferencesInterface: true]
 196     [wsgen] [declaring class has WebSevice: false]
 197     [wsgen] [returning: true]
 198     [wsgen] [WrapperGen - method: getLimits()]
 199     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 200     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 201     [wsgen] compbio/data/msa/jaxws/Analize.java
 202     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
 203     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 204     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 205     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
 206     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
 207     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
 208     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
 209     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 210     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 211     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 212     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 213     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 214     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 215     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 216     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 217     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 218     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 219     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 220     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 221     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
 222     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
 223     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 224     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 225     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 226     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 227     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 228     [wsgen] Note:       ap round: 2
 229     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MSAprobsWS
 230     [wsgen] Note:       ap round: 1
 231     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 232     [wsgen] [should process method: align hasWebMethods: false ]
 233     [wsgen] [endpointReferencesInterface: true]
 234     [wsgen] [declaring class has WebSevice: true]
 235     [wsgen] [returning: true]
 236     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 237     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 238     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 239     [wsgen] [should process method: customAlign hasWebMethods: false ]
 240     [wsgen] [endpointReferencesInterface: true]
 241     [wsgen] [declaring class has WebSevice: true]
 242     [wsgen] [returning: true]
 243     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 244     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 245     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 246     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 247     [wsgen] [endpointReferencesInterface: true]
 248     [wsgen] [declaring class has WebSevice: true]
 249     [wsgen] [returning: true]
 250     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 251     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 252     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 253     [wsgen] [should process method: getResult hasWebMethods: false ]
 254     [wsgen] [endpointReferencesInterface: true]
 255     [wsgen] [declaring class has WebSevice: true]
 256     [wsgen] [returning: true]
 257     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 258     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 259     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 260     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 261     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 262     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 263     [wsgen] [endpointReferencesInterface: true]
 264     [wsgen] [declaring class has WebSevice: false]
 265     [wsgen] [returning: true]
 266     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 267     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 268     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 269     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 270     [wsgen] [endpointReferencesInterface: true]
 271     [wsgen] [declaring class has WebSevice: false]
 272     [wsgen] [returning: true]
 273     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 274     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 275     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 276     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 277     [wsgen] [endpointReferencesInterface: true]
 278     [wsgen] [declaring class has WebSevice: false]
 279     [wsgen] [returning: true]
 280     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 281     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 282     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 283     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 284     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 285     [wsgen] [endpointReferencesInterface: true]
 286     [wsgen] [declaring class has WebSevice: false]
 287     [wsgen] [returning: true]
 288     [wsgen] [WrapperGen - method: getRunnerOptions()]
 289     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 290     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 291     [wsgen] [should process method: getPresets hasWebMethods: false ]
 292     [wsgen] [endpointReferencesInterface: true]
 293     [wsgen] [declaring class has WebSevice: false]
 294     [wsgen] [returning: true]
 295     [wsgen] [WrapperGen - method: getPresets()]
 296     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 297     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 298     [wsgen] [should process method: getLimit hasWebMethods: false ]
 299     [wsgen] [endpointReferencesInterface: true]
 300     [wsgen] [declaring class has WebSevice: false]
 301     [wsgen] [returning: true]
 302     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 303     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 304     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 305     [wsgen] [should process method: getLimits hasWebMethods: false ]
 306     [wsgen] [endpointReferencesInterface: true]
 307     [wsgen] [declaring class has WebSevice: false]
 308     [wsgen] [returning: true]
 309     [wsgen] [WrapperGen - method: getLimits()]
 310     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 311     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 312     [wsgen] compbio/data/msa/jaxws/Align.java
 313     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 314     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 315     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 316     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 317     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 318     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 319     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 320     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 321     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 322     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 323     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 324     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 325     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 326     [wsgen] compbio/data/msa/jaxws/GetResult.java
 327     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 328     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 329     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 330     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 331     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 332     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 333     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 334     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 335     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 336     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 337     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 338     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 339     [wsgen] Note:       ap round: 2
 340     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.GLprobsWS
 341     [wsgen] Note:       ap round: 1
 342     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 343     [wsgen] [should process method: align hasWebMethods: false ]
 344     [wsgen] [endpointReferencesInterface: true]
 345     [wsgen] [declaring class has WebSevice: true]
 346     [wsgen] [returning: true]
 347     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 348     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 349     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 350     [wsgen] [should process method: customAlign hasWebMethods: false ]
 351     [wsgen] [endpointReferencesInterface: true]
 352     [wsgen] [declaring class has WebSevice: true]
 353     [wsgen] [returning: true]
 354     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 355     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 356     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 357     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 358     [wsgen] [endpointReferencesInterface: true]
 359     [wsgen] [declaring class has WebSevice: true]
 360     [wsgen] [returning: true]
 361     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 362     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 363     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 364     [wsgen] [should process method: getResult hasWebMethods: false ]
 365     [wsgen] [endpointReferencesInterface: true]
 366     [wsgen] [declaring class has WebSevice: true]
 367     [wsgen] [returning: true]
 368     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 369     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 370     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 371     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 372     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 373     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 374     [wsgen] [endpointReferencesInterface: true]
 375     [wsgen] [declaring class has WebSevice: false]
 376     [wsgen] [returning: true]
 377     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 378     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 379     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 380     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 381     [wsgen] [endpointReferencesInterface: true]
 382     [wsgen] [declaring class has WebSevice: false]
 383     [wsgen] [returning: true]
 384     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 385     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 386     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 387     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 388     [wsgen] [endpointReferencesInterface: true]
 389     [wsgen] [declaring class has WebSevice: false]
 390     [wsgen] [returning: true]
 391     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 392     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 393     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 394     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 395     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 396     [wsgen] [endpointReferencesInterface: true]
 397     [wsgen] [declaring class has WebSevice: false]
 398     [wsgen] [returning: true]
 399     [wsgen] [WrapperGen - method: getRunnerOptions()]
 400     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 401     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 402     [wsgen] [should process method: getPresets hasWebMethods: false ]
 403     [wsgen] [endpointReferencesInterface: true]
 404     [wsgen] [declaring class has WebSevice: false]
 405     [wsgen] [returning: true]
 406     [wsgen] [WrapperGen - method: getPresets()]
 407     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 408     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 409     [wsgen] [should process method: getLimit hasWebMethods: false ]
 410     [wsgen] [endpointReferencesInterface: true]
 411     [wsgen] [declaring class has WebSevice: false]
 412     [wsgen] [returning: true]
 413     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 414     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 415     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 416     [wsgen] [should process method: getLimits hasWebMethods: false ]
 417     [wsgen] [endpointReferencesInterface: true]
 418     [wsgen] [declaring class has WebSevice: false]
 419     [wsgen] [returning: true]
 420     [wsgen] [WrapperGen - method: getLimits()]
 421     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 422     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 423     [wsgen] compbio/data/msa/jaxws/Align.java
 424     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 425     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 426     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 427     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 428     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 429     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 430     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 431     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 432     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 433     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 434     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 435     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 436     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 437     [wsgen] compbio/data/msa/jaxws/GetResult.java
 438     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 439     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 440     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 441     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 442     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 443     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 444     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 445     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 446     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 447     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 448     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 449     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 450     [wsgen] Note:       ap round: 2
 451     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.ClustalWS
 452     [wsgen] Note:       ap round: 1
 453     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 454     [wsgen] [should process method: align hasWebMethods: false ]
 455     [wsgen] [endpointReferencesInterface: true]
 456     [wsgen] [declaring class has WebSevice: true]
 457     [wsgen] [returning: true]
 458     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 459     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 460     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 461     [wsgen] [should process method: customAlign hasWebMethods: false ]
 462     [wsgen] [endpointReferencesInterface: true]
 463     [wsgen] [declaring class has WebSevice: true]
 464     [wsgen] [returning: true]
 465     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 466     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 467     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 468     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 469     [wsgen] [endpointReferencesInterface: true]
 470     [wsgen] [declaring class has WebSevice: true]
 471     [wsgen] [returning: true]
 472     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 473     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 474     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 475     [wsgen] [should process method: getResult hasWebMethods: false ]
 476     [wsgen] [endpointReferencesInterface: true]
 477     [wsgen] [declaring class has WebSevice: true]
 478     [wsgen] [returning: true]
 479     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 480     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 481     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 482     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 483     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 484     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 485     [wsgen] [endpointReferencesInterface: true]
 486     [wsgen] [declaring class has WebSevice: false]
 487     [wsgen] [returning: true]
 488     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 489     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 490     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 491     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 492     [wsgen] [endpointReferencesInterface: true]
 493     [wsgen] [declaring class has WebSevice: false]
 494     [wsgen] [returning: true]
 495     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 496     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 497     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 498     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 499     [wsgen] [endpointReferencesInterface: true]
 500     [wsgen] [declaring class has WebSevice: false]
 501     [wsgen] [returning: true]
 502     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 503     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 504     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 505     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 506     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 507     [wsgen] [endpointReferencesInterface: true]
 508     [wsgen] [declaring class has WebSevice: false]
 509     [wsgen] [returning: true]
 510     [wsgen] [WrapperGen - method: getRunnerOptions()]
 511     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 512     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 513     [wsgen] [should process method: getPresets hasWebMethods: false ]
 514     [wsgen] [endpointReferencesInterface: true]
 515     [wsgen] [declaring class has WebSevice: false]
 516     [wsgen] [returning: true]
 517     [wsgen] [WrapperGen - method: getPresets()]
 518     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 519     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 520     [wsgen] [should process method: getLimit hasWebMethods: false ]
 521     [wsgen] [endpointReferencesInterface: true]
 522     [wsgen] [declaring class has WebSevice: false]
 523     [wsgen] [returning: true]
 524     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 525     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 526     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 527     [wsgen] [should process method: getLimits hasWebMethods: false ]
 528     [wsgen] [endpointReferencesInterface: true]
 529     [wsgen] [declaring class has WebSevice: false]
 530     [wsgen] [returning: true]
 531     [wsgen] [WrapperGen - method: getLimits()]
 532     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 533     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 534     [wsgen] compbio/data/msa/jaxws/Align.java
 535     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 536     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 537     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 538     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 539     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 540     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 541     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 542     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 543     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 544     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 545     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 546     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 547     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 548     [wsgen] compbio/data/msa/jaxws/GetResult.java
 549     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 550     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 551     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 552     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 553     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 554     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 555     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 556     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 557     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 558     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 559     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 560     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 561     [wsgen] Note:       ap round: 2
 562     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MuscleWS
 563     [wsgen] Note:       ap round: 1
 564     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 565     [wsgen] [should process method: align hasWebMethods: false ]
 566     [wsgen] [endpointReferencesInterface: true]
 567     [wsgen] [declaring class has WebSevice: true]
 568     [wsgen] [returning: true]
 569     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 570     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 571     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 572     [wsgen] [should process method: customAlign hasWebMethods: false ]
 573     [wsgen] [endpointReferencesInterface: true]
 574     [wsgen] [declaring class has WebSevice: true]
 575     [wsgen] [returning: true]
 576     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 577     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 578     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 579     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 580     [wsgen] [endpointReferencesInterface: true]
 581     [wsgen] [declaring class has WebSevice: true]
 582     [wsgen] [returning: true]
 583     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 584     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 585     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 586     [wsgen] [should process method: getResult hasWebMethods: false ]
 587     [wsgen] [endpointReferencesInterface: true]
 588     [wsgen] [declaring class has WebSevice: true]
 589     [wsgen] [returning: true]
 590     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 591     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 592     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 593     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 594     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 595     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 596     [wsgen] [endpointReferencesInterface: true]
 597     [wsgen] [declaring class has WebSevice: false]
 598     [wsgen] [returning: true]
 599     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 600     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 601     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 602     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 603     [wsgen] [endpointReferencesInterface: true]
 604     [wsgen] [declaring class has WebSevice: false]
 605     [wsgen] [returning: true]
 606     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 607     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 608     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 609     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 610     [wsgen] [endpointReferencesInterface: true]
 611     [wsgen] [declaring class has WebSevice: false]
 612     [wsgen] [returning: true]
 613     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 614     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 615     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 616     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 617     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 618     [wsgen] [endpointReferencesInterface: true]
 619     [wsgen] [declaring class has WebSevice: false]
 620     [wsgen] [returning: true]
 621     [wsgen] [WrapperGen - method: getRunnerOptions()]
 622     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 623     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 624     [wsgen] [should process method: getPresets hasWebMethods: false ]
 625     [wsgen] [endpointReferencesInterface: true]
 626     [wsgen] [declaring class has WebSevice: false]
 627     [wsgen] [returning: true]
 628     [wsgen] [WrapperGen - method: getPresets()]
 629     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 630     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 631     [wsgen] [should process method: getLimit hasWebMethods: false ]
 632     [wsgen] [endpointReferencesInterface: true]
 633     [wsgen] [declaring class has WebSevice: false]
 634     [wsgen] [returning: true]
 635     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 636     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 637     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 638     [wsgen] [should process method: getLimits hasWebMethods: false ]
 639     [wsgen] [endpointReferencesInterface: true]
 640     [wsgen] [declaring class has WebSevice: false]
 641     [wsgen] [returning: true]
 642     [wsgen] [WrapperGen - method: getLimits()]
 643     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 644     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 645     [wsgen] compbio/data/msa/jaxws/Align.java
 646     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 647     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 648     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 649     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 650     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 651     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 652     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 653     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 654     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 655     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 656     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 657     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 658     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 659     [wsgen] compbio/data/msa/jaxws/GetResult.java
 660     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 661     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 662     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 663     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 664     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 665     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 666     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 667     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 668     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 669     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 670     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 671     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 672     [wsgen] Note:       ap round: 2
 673     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.MafftWS
 674     [wsgen] Note:       ap round: 1
 675     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 676     [wsgen] [should process method: align hasWebMethods: false ]
 677     [wsgen] [endpointReferencesInterface: true]
 678     [wsgen] [declaring class has WebSevice: true]
 679     [wsgen] [returning: true]
 680     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 681     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 682     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 683     [wsgen] [should process method: customAlign hasWebMethods: false ]
 684     [wsgen] [endpointReferencesInterface: true]
 685     [wsgen] [declaring class has WebSevice: true]
 686     [wsgen] [returning: true]
 687     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 688     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 689     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 690     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 691     [wsgen] [endpointReferencesInterface: true]
 692     [wsgen] [declaring class has WebSevice: true]
 693     [wsgen] [returning: true]
 694     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 695     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 696     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 697     [wsgen] [should process method: getResult hasWebMethods: false ]
 698     [wsgen] [endpointReferencesInterface: true]
 699     [wsgen] [declaring class has WebSevice: true]
 700     [wsgen] [returning: true]
 701     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 702     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 703     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 704     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 705     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 706     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 707     [wsgen] [endpointReferencesInterface: true]
 708     [wsgen] [declaring class has WebSevice: false]
 709     [wsgen] [returning: true]
 710     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 711     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 712     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 713     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 714     [wsgen] [endpointReferencesInterface: true]
 715     [wsgen] [declaring class has WebSevice: false]
 716     [wsgen] [returning: true]
 717     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 718     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 719     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 720     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 721     [wsgen] [endpointReferencesInterface: true]
 722     [wsgen] [declaring class has WebSevice: false]
 723     [wsgen] [returning: true]
 724     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 725     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 726     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 727     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 728     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 729     [wsgen] [endpointReferencesInterface: true]
 730     [wsgen] [declaring class has WebSevice: false]
 731     [wsgen] [returning: true]
 732     [wsgen] [WrapperGen - method: getRunnerOptions()]
 733     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 734     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 735     [wsgen] [should process method: getPresets hasWebMethods: false ]
 736     [wsgen] [endpointReferencesInterface: true]
 737     [wsgen] [declaring class has WebSevice: false]
 738     [wsgen] [returning: true]
 739     [wsgen] [WrapperGen - method: getPresets()]
 740     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 741     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 742     [wsgen] [should process method: getLimit hasWebMethods: false ]
 743     [wsgen] [endpointReferencesInterface: true]
 744     [wsgen] [declaring class has WebSevice: false]
 745     [wsgen] [returning: true]
 746     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 747     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 748     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 749     [wsgen] [should process method: getLimits hasWebMethods: false ]
 750     [wsgen] [endpointReferencesInterface: true]
 751     [wsgen] [declaring class has WebSevice: false]
 752     [wsgen] [returning: true]
 753     [wsgen] [WrapperGen - method: getLimits()]
 754     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 755     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 756     [wsgen] compbio/data/msa/jaxws/Align.java
 757     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 758     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 759     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 760     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 761     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 762     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 763     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 764     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 765     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 766     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 767     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 768     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 769     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 770     [wsgen] compbio/data/msa/jaxws/GetResult.java
 771     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 772     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 773     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 774     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 775     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 776     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 777     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 778     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 779     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 780     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 781     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 782     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 783     [wsgen] Note:       ap round: 2
 784     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.TcoffeeWS
 785     [wsgen] Note:       ap round: 1
 786     [wsgen] [ProcessedMethods Interface: compbio.data.msa.MsaWS<T>]
 787     [wsgen] [should process method: align hasWebMethods: false ]
 788     [wsgen] [endpointReferencesInterface: true]
 789     [wsgen] [declaring class has WebSevice: true]
 790     [wsgen] [returning: true]
 791     [wsgen] [WrapperGen - method: align(java.util.List<compbio.data.sequence.FastaSequence>)]
 792     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 793     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Align]
 794     [wsgen] [should process method: customAlign hasWebMethods: false ]
 795     [wsgen] [endpointReferencesInterface: true]
 796     [wsgen] [declaring class has WebSevice: true]
 797     [wsgen] [returning: true]
 798     [wsgen] [WrapperGen - method: customAlign(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 799     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 800     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAlign]
 801     [wsgen] [should process method: presetAlign hasWebMethods: false ]
 802     [wsgen] [endpointReferencesInterface: true]
 803     [wsgen] [declaring class has WebSevice: true]
 804     [wsgen] [returning: true]
 805     [wsgen] [WrapperGen - method: presetAlign(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 806     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 807     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAlign]
 808     [wsgen] [should process method: getResult hasWebMethods: false ]
 809     [wsgen] [endpointReferencesInterface: true]
 810     [wsgen] [declaring class has WebSevice: true]
 811     [wsgen] [returning: true]
 812     [wsgen] [WrapperGen - method: getResult(java.lang.String)]
 813     [wsgen] [method.getDeclaringType(): compbio.data.msa.MsaWS<T>]
 814     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetResult]
 815     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 816     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 817     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 818     [wsgen] [endpointReferencesInterface: true]
 819     [wsgen] [declaring class has WebSevice: false]
 820     [wsgen] [returning: true]
 821     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 822     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 823     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 824     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 825     [wsgen] [endpointReferencesInterface: true]
 826     [wsgen] [declaring class has WebSevice: false]
 827     [wsgen] [returning: true]
 828     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 829     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 830     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 831     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 832     [wsgen] [endpointReferencesInterface: true]
 833     [wsgen] [declaring class has WebSevice: false]
 834     [wsgen] [returning: true]
 835     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 836     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 837     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 838     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 839     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 840     [wsgen] [endpointReferencesInterface: true]
 841     [wsgen] [declaring class has WebSevice: false]
 842     [wsgen] [returning: true]
 843     [wsgen] [WrapperGen - method: getRunnerOptions()]
 844     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 845     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 846     [wsgen] [should process method: getPresets hasWebMethods: false ]
 847     [wsgen] [endpointReferencesInterface: true]
 848     [wsgen] [declaring class has WebSevice: false]
 849     [wsgen] [returning: true]
 850     [wsgen] [WrapperGen - method: getPresets()]
 851     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 852     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 853     [wsgen] [should process method: getLimit hasWebMethods: false ]
 854     [wsgen] [endpointReferencesInterface: true]
 855     [wsgen] [declaring class has WebSevice: false]
 856     [wsgen] [returning: true]
 857     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 858     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 859     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 860     [wsgen] [should process method: getLimits hasWebMethods: false ]
 861     [wsgen] [endpointReferencesInterface: true]
 862     [wsgen] [declaring class has WebSevice: false]
 863     [wsgen] [returning: true]
 864     [wsgen] [WrapperGen - method: getLimits()]
 865     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 866     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 867     [wsgen] compbio/data/msa/jaxws/Align.java
 868     [wsgen] compbio/data/msa/jaxws/AlignResponse.java
 869     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 870     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 871     [wsgen] compbio/data/msa/jaxws/CustomAlign.java
 872     [wsgen] compbio/data/msa/jaxws/CustomAlignResponse.java
 873     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 874     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 875     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 876     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 877     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 878     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 879     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 880     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 881     [wsgen] compbio/data/msa/jaxws/GetResult.java
 882     [wsgen] compbio/data/msa/jaxws/GetResultResponse.java
 883     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 884     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 885     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 886     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 887     [wsgen] compbio/data/msa/jaxws/PresetAlign.java
 888     [wsgen] compbio/data/msa/jaxws/PresetAlignResponse.java
 889     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
 890     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
 891     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
 892     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
 893     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
 894     [wsgen] Note:       ap round: 2
 895     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.DisemblWS
 896     [wsgen] Note:       ap round: 1
 897     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
 898     [wsgen] [should process method: analize hasWebMethods: false ]
 899     [wsgen] [endpointReferencesInterface: true]
 900     [wsgen] [declaring class has WebSevice: true]
 901     [wsgen] [returning: true]
 902     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
 903     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 904     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
 905     [wsgen] [should process method: customAnalize hasWebMethods: false ]
 906     [wsgen] [endpointReferencesInterface: true]
 907     [wsgen] [declaring class has WebSevice: true]
 908     [wsgen] [returning: true]
 909     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
 910     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 911     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
 912     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
 913     [wsgen] [endpointReferencesInterface: true]
 914     [wsgen] [declaring class has WebSevice: true]
 915     [wsgen] [returning: true]
 916     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
 917     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 918     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
 919     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
 920     [wsgen] [endpointReferencesInterface: true]
 921     [wsgen] [declaring class has WebSevice: true]
 922     [wsgen] [returning: true]
 923     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
 924     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
 925     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
 926     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
 927     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
 928     [wsgen] [should process method: cancelJob hasWebMethods: false ]
 929     [wsgen] [endpointReferencesInterface: true]
 930     [wsgen] [declaring class has WebSevice: false]
 931     [wsgen] [returning: true]
 932     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
 933     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 934     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
 935     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
 936     [wsgen] [endpointReferencesInterface: true]
 937     [wsgen] [declaring class has WebSevice: false]
 938     [wsgen] [returning: true]
 939     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
 940     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 941     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
 942     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
 943     [wsgen] [endpointReferencesInterface: true]
 944     [wsgen] [declaring class has WebSevice: false]
 945     [wsgen] [returning: true]
 946     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
 947     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
 948     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
 949     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
 950     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
 951     [wsgen] [endpointReferencesInterface: true]
 952     [wsgen] [declaring class has WebSevice: false]
 953     [wsgen] [returning: true]
 954     [wsgen] [WrapperGen - method: getRunnerOptions()]
 955     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 956     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
 957     [wsgen] [should process method: getPresets hasWebMethods: false ]
 958     [wsgen] [endpointReferencesInterface: true]
 959     [wsgen] [declaring class has WebSevice: false]
 960     [wsgen] [returning: true]
 961     [wsgen] [WrapperGen - method: getPresets()]
 962     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 963     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
 964     [wsgen] [should process method: getLimit hasWebMethods: false ]
 965     [wsgen] [endpointReferencesInterface: true]
 966     [wsgen] [declaring class has WebSevice: false]
 967     [wsgen] [returning: true]
 968     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
 969     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 970     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
 971     [wsgen] [should process method: getLimits hasWebMethods: false ]
 972     [wsgen] [endpointReferencesInterface: true]
 973     [wsgen] [declaring class has WebSevice: false]
 974     [wsgen] [returning: true]
 975     [wsgen] [WrapperGen - method: getLimits()]
 976     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
 977     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
 978     [wsgen] compbio/data/msa/jaxws/Analize.java
 979     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
 980     [wsgen] compbio/data/msa/jaxws/CancelJob.java
 981     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
 982     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
 983     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
 984     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
 985     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
 986     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
 987     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
 988     [wsgen] compbio/data/msa/jaxws/GetLimit.java
 989     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
 990     [wsgen] compbio/data/msa/jaxws/GetLimits.java
 991     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
 992     [wsgen] compbio/data/msa/jaxws/GetPresets.java
 993     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
 994     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
 995     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
 996     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
 997     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
 998     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
 999     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1000     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1001     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1002     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1003     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1004     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1005     [wsgen] Note:       ap round: 2
1006     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.GlobPlotWS
1007     [wsgen] Note:       ap round: 1
1008     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
1009     [wsgen] [should process method: analize hasWebMethods: false ]
1010     [wsgen] [endpointReferencesInterface: true]
1011     [wsgen] [declaring class has WebSevice: true]
1012     [wsgen] [returning: true]
1013     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
1014     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1015     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
1016     [wsgen] [should process method: customAnalize hasWebMethods: false ]
1017     [wsgen] [endpointReferencesInterface: true]
1018     [wsgen] [declaring class has WebSevice: true]
1019     [wsgen] [returning: true]
1020     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
1021     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1022     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
1023     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
1024     [wsgen] [endpointReferencesInterface: true]
1025     [wsgen] [declaring class has WebSevice: true]
1026     [wsgen] [returning: true]
1027     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
1028     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1029     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
1030     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
1031     [wsgen] [endpointReferencesInterface: true]
1032     [wsgen] [declaring class has WebSevice: true]
1033     [wsgen] [returning: true]
1034     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
1035     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1036     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
1037     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1038     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
1039     [wsgen] [should process method: cancelJob hasWebMethods: false ]
1040     [wsgen] [endpointReferencesInterface: true]
1041     [wsgen] [declaring class has WebSevice: false]
1042     [wsgen] [returning: true]
1043     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
1044     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1045     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
1046     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
1047     [wsgen] [endpointReferencesInterface: true]
1048     [wsgen] [declaring class has WebSevice: false]
1049     [wsgen] [returning: true]
1050     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
1051     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1052     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
1053     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
1054     [wsgen] [endpointReferencesInterface: true]
1055     [wsgen] [declaring class has WebSevice: false]
1056     [wsgen] [returning: true]
1057     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
1058     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1059     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
1060     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
1061     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
1062     [wsgen] [endpointReferencesInterface: true]
1063     [wsgen] [declaring class has WebSevice: false]
1064     [wsgen] [returning: true]
1065     [wsgen] [WrapperGen - method: getRunnerOptions()]
1066     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1067     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
1068     [wsgen] [should process method: getPresets hasWebMethods: false ]
1069     [wsgen] [endpointReferencesInterface: true]
1070     [wsgen] [declaring class has WebSevice: false]
1071     [wsgen] [returning: true]
1072     [wsgen] [WrapperGen - method: getPresets()]
1073     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1074     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
1075     [wsgen] [should process method: getLimit hasWebMethods: false ]
1076     [wsgen] [endpointReferencesInterface: true]
1077     [wsgen] [declaring class has WebSevice: false]
1078     [wsgen] [returning: true]
1079     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
1080     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1081     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
1082     [wsgen] [should process method: getLimits hasWebMethods: false ]
1083     [wsgen] [endpointReferencesInterface: true]
1084     [wsgen] [declaring class has WebSevice: false]
1085     [wsgen] [returning: true]
1086     [wsgen] [WrapperGen - method: getLimits()]
1087     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1088     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
1089     [wsgen] compbio/data/msa/jaxws/Analize.java
1090     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1091     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1092     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1093     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1094     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1095     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1096     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1097     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1098     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1099     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1100     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1101     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1102     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1103     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1104     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1105     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1106     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1107     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1108     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1109     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1110     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1111     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1112     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1113     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1114     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1115     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1116     [wsgen] Note:       ap round: 2
1117     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.JronnWS
1118     [wsgen] Note:       ap round: 1
1119     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
1120     [wsgen] [should process method: analize hasWebMethods: false ]
1121     [wsgen] [endpointReferencesInterface: true]
1122     [wsgen] [declaring class has WebSevice: true]
1123     [wsgen] [returning: true]
1124     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
1125     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1126     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
1127     [wsgen] [should process method: customAnalize hasWebMethods: false ]
1128     [wsgen] [endpointReferencesInterface: true]
1129     [wsgen] [declaring class has WebSevice: true]
1130     [wsgen] [returning: true]
1131     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
1132     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1133     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
1134     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
1135     [wsgen] [endpointReferencesInterface: true]
1136     [wsgen] [declaring class has WebSevice: true]
1137     [wsgen] [returning: true]
1138     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
1139     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1140     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
1141     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
1142     [wsgen] [endpointReferencesInterface: true]
1143     [wsgen] [declaring class has WebSevice: true]
1144     [wsgen] [returning: true]
1145     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
1146     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1147     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
1148     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1149     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
1150     [wsgen] [should process method: cancelJob hasWebMethods: false ]
1151     [wsgen] [endpointReferencesInterface: true]
1152     [wsgen] [declaring class has WebSevice: false]
1153     [wsgen] [returning: true]
1154     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
1155     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1156     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
1157     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
1158     [wsgen] [endpointReferencesInterface: true]
1159     [wsgen] [declaring class has WebSevice: false]
1160     [wsgen] [returning: true]
1161     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
1162     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1163     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
1164     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
1165     [wsgen] [endpointReferencesInterface: true]
1166     [wsgen] [declaring class has WebSevice: false]
1167     [wsgen] [returning: true]
1168     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
1169     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1170     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
1171     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
1172     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
1173     [wsgen] [endpointReferencesInterface: true]
1174     [wsgen] [declaring class has WebSevice: false]
1175     [wsgen] [returning: true]
1176     [wsgen] [WrapperGen - method: getRunnerOptions()]
1177     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1178     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
1179     [wsgen] [should process method: getPresets hasWebMethods: false ]
1180     [wsgen] [endpointReferencesInterface: true]
1181     [wsgen] [declaring class has WebSevice: false]
1182     [wsgen] [returning: true]
1183     [wsgen] [WrapperGen - method: getPresets()]
1184     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1185     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
1186     [wsgen] [should process method: getLimit hasWebMethods: false ]
1187     [wsgen] [endpointReferencesInterface: true]
1188     [wsgen] [declaring class has WebSevice: false]
1189     [wsgen] [returning: true]
1190     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
1191     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1192     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
1193     [wsgen] [should process method: getLimits hasWebMethods: false ]
1194     [wsgen] [endpointReferencesInterface: true]
1195     [wsgen] [declaring class has WebSevice: false]
1196     [wsgen] [returning: true]
1197     [wsgen] [WrapperGen - method: getLimits()]
1198     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1199     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
1200     [wsgen] compbio/data/msa/jaxws/Analize.java
1201     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1202     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1203     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1204     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1205     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1206     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1207     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1208     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1209     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1210     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1211     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1212     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1213     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1214     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1215     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1216     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1217     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1218     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1219     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1220     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1221     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1222     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1223     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1224     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1225     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1226     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1227     [wsgen] Note:       ap round: 2
1228     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.IUPredWS
1229     [wsgen] Note:       ap round: 1
1230     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
1231     [wsgen] [should process method: analize hasWebMethods: false ]
1232     [wsgen] [endpointReferencesInterface: true]
1233     [wsgen] [declaring class has WebSevice: true]
1234     [wsgen] [returning: true]
1235     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
1236     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1237     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
1238     [wsgen] [should process method: customAnalize hasWebMethods: false ]
1239     [wsgen] [endpointReferencesInterface: true]
1240     [wsgen] [declaring class has WebSevice: true]
1241     [wsgen] [returning: true]
1242     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
1243     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1244     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
1245     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
1246     [wsgen] [endpointReferencesInterface: true]
1247     [wsgen] [declaring class has WebSevice: true]
1248     [wsgen] [returning: true]
1249     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
1250     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1251     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
1252     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
1253     [wsgen] [endpointReferencesInterface: true]
1254     [wsgen] [declaring class has WebSevice: true]
1255     [wsgen] [returning: true]
1256     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
1257     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1258     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
1259     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1260     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
1261     [wsgen] [should process method: cancelJob hasWebMethods: false ]
1262     [wsgen] [endpointReferencesInterface: true]
1263     [wsgen] [declaring class has WebSevice: false]
1264     [wsgen] [returning: true]
1265     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
1266     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1267     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
1268     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
1269     [wsgen] [endpointReferencesInterface: true]
1270     [wsgen] [declaring class has WebSevice: false]
1271     [wsgen] [returning: true]
1272     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
1273     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1274     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
1275     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
1276     [wsgen] [endpointReferencesInterface: true]
1277     [wsgen] [declaring class has WebSevice: false]
1278     [wsgen] [returning: true]
1279     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
1280     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1281     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
1282     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
1283     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
1284     [wsgen] [endpointReferencesInterface: true]
1285     [wsgen] [declaring class has WebSevice: false]
1286     [wsgen] [returning: true]
1287     [wsgen] [WrapperGen - method: getRunnerOptions()]
1288     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1289     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
1290     [wsgen] [should process method: getPresets hasWebMethods: false ]
1291     [wsgen] [endpointReferencesInterface: true]
1292     [wsgen] [declaring class has WebSevice: false]
1293     [wsgen] [returning: true]
1294     [wsgen] [WrapperGen - method: getPresets()]
1295     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1296     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
1297     [wsgen] [should process method: getLimit hasWebMethods: false ]
1298     [wsgen] [endpointReferencesInterface: true]
1299     [wsgen] [declaring class has WebSevice: false]
1300     [wsgen] [returning: true]
1301     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
1302     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1303     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
1304     [wsgen] [should process method: getLimits hasWebMethods: false ]
1305     [wsgen] [endpointReferencesInterface: true]
1306     [wsgen] [declaring class has WebSevice: false]
1307     [wsgen] [returning: true]
1308     [wsgen] [WrapperGen - method: getLimits()]
1309     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1310     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
1311     [wsgen] compbio/data/msa/jaxws/Analize.java
1312     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1313     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1314     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1315     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1316     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1317     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1318     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1319     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1320     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1321     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1322     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1323     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1324     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1325     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1326     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1327     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1328     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1329     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1330     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1331     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1332     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1333     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1334     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1335     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1336     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1337     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1338     [wsgen] Note:       ap round: 2
1339     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.RegistryWS
1340     [wsgen] Note:       ap round: 1
1341     [wsgen] [ProcessedMethods Interface: compbio.data.msa.RegistryWS]
1342     [wsgen] [should process method: getSupportedServices hasWebMethods: false ]
1343     [wsgen] [endpointReferencesInterface: true]
1344     [wsgen] [declaring class has WebSevice: true]
1345     [wsgen] [returning: true]
1346     [wsgen] [WrapperGen - method: getSupportedServices()]
1347     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1348     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetSupportedServices]
1349     [wsgen] [should process method: getNonoperatedServices hasWebMethods: false ]
1350     [wsgen] [endpointReferencesInterface: true]
1351     [wsgen] [declaring class has WebSevice: true]
1352     [wsgen] [returning: true]
1353     [wsgen] [WrapperGen - method: getNonoperatedServices()]
1354     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1355     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetNonoperatedServices]
1356     [wsgen] [should process method: getLastTested hasWebMethods: false ]
1357     [wsgen] [endpointReferencesInterface: true]
1358     [wsgen] [declaring class has WebSevice: true]
1359     [wsgen] [returning: true]
1360     [wsgen] [WrapperGen - method: getLastTested(compbio.ws.client.Services)]
1361     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1362     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLastTested]
1363     [wsgen] [should process method: getLastTestedOn hasWebMethods: false ]
1364     [wsgen] [endpointReferencesInterface: true]
1365     [wsgen] [declaring class has WebSevice: true]
1366     [wsgen] [returning: true]
1367     [wsgen] [WrapperGen - method: getLastTestedOn(compbio.ws.client.Services)]
1368     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1369     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLastTestedOn]
1370     [wsgen] [should process method: testAllServices hasWebMethods: false ]
1371     [wsgen] [endpointReferencesInterface: true]
1372     [wsgen] [declaring class has WebSevice: true]
1373     [wsgen] [returning: true]
1374     [wsgen] [WrapperGen - method: testAllServices()]
1375     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1376     [wsgen] [requestWrapper: compbio.data.msa.jaxws.TestAllServices]
1377     [wsgen] [should process method: testService hasWebMethods: false ]
1378     [wsgen] [endpointReferencesInterface: true]
1379     [wsgen] [declaring class has WebSevice: true]
1380     [wsgen] [returning: true]
1381     [wsgen] [WrapperGen - method: testService(compbio.ws.client.Services)]
1382     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1383     [wsgen] [requestWrapper: compbio.data.msa.jaxws.TestService]
1384     [wsgen] [should process method: isOperating hasWebMethods: false ]
1385     [wsgen] [endpointReferencesInterface: true]
1386     [wsgen] [declaring class has WebSevice: true]
1387     [wsgen] [returning: true]
1388     [wsgen] [WrapperGen - method: isOperating(compbio.ws.client.Services)]
1389     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1390     [wsgen] [requestWrapper: compbio.data.msa.jaxws.IsOperating]
1391     [wsgen] [should process method: getServiceDescription hasWebMethods: false ]
1392     [wsgen] [endpointReferencesInterface: true]
1393     [wsgen] [declaring class has WebSevice: true]
1394     [wsgen] [returning: true]
1395     [wsgen] [WrapperGen - method: getServiceDescription(compbio.ws.client.Services)]
1396     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1397     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetServiceDescription]
1398     [wsgen] [should process method: getServiceCategories hasWebMethods: false ]
1399     [wsgen] [endpointReferencesInterface: true]
1400     [wsgen] [declaring class has WebSevice: true]
1401     [wsgen] [returning: true]
1402     [wsgen] [WrapperGen - method: getServiceCategories()]
1403     [wsgen] [method.getDeclaringType(): compbio.data.msa.RegistryWS]
1404     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetServiceCategories]
1405     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1406     [wsgen] compbio/data/msa/jaxws/GetLastTested.java
1407     [wsgen] compbio/data/msa/jaxws/GetLastTestedOn.java
1408     [wsgen] compbio/data/msa/jaxws/GetLastTestedOnResponse.java
1409     [wsgen] compbio/data/msa/jaxws/GetLastTestedResponse.java
1410     [wsgen] compbio/data/msa/jaxws/GetNonoperatedServices.java
1411     [wsgen] compbio/data/msa/jaxws/GetNonoperatedServicesResponse.java
1412     [wsgen] compbio/data/msa/jaxws/GetServiceCategories.java
1413     [wsgen] compbio/data/msa/jaxws/GetServiceCategoriesResponse.java
1414     [wsgen] compbio/data/msa/jaxws/GetServiceDescription.java
1415     [wsgen] compbio/data/msa/jaxws/GetServiceDescriptionResponse.java
1416     [wsgen] compbio/data/msa/jaxws/GetSupportedServices.java
1417     [wsgen] compbio/data/msa/jaxws/GetSupportedServicesResponse.java
1418     [wsgen] compbio/data/msa/jaxws/IsOperating.java
1419     [wsgen] compbio/data/msa/jaxws/IsOperatingResponse.java
1420     [wsgen] compbio/data/msa/jaxws/TestAllServices.java
1421     [wsgen] compbio/data/msa/jaxws/TestAllServicesResponse.java
1422     [wsgen] compbio/data/msa/jaxws/TestService.java
1423     [wsgen] compbio/data/msa/jaxws/TestServiceResponse.java
1424     [wsgen] Note:       ap round: 2
1425     [wsgen] command line: wsgen -classpath /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-beanutils-1.7.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-collections-3.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-lang-2.3.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/commons-logging-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-annotations-1.0.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-ga-1.1.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/compbio-util-1.4.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/derby-10.8.2.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/displaytag-export-poi-1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/drmaa.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/itext-1.4.7.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/jstl-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/log4j-1.2.15.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/poi-3.2-FINAL-20081019.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/standard-1.1.2.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-api.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-rt.jar:/home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/lib/webservices-tools.jar -d /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/WEB-INF/classes -Xendorsed -keep -wsdl -r /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices/compbio/ws/server/resource -s /home/asherstnev/Projects/Java.projects/jabaws/secure-git/develop/webservices -verbose compbio.ws.server.RNAalifoldWS
1426     [wsgen] Note:       ap round: 1
1427     [wsgen] [ProcessedMethods Interface: compbio.data.msa.SequenceAnnotation<T>]
1428     [wsgen] [should process method: analize hasWebMethods: false ]
1429     [wsgen] [endpointReferencesInterface: true]
1430     [wsgen] [declaring class has WebSevice: true]
1431     [wsgen] [returning: true]
1432     [wsgen] [WrapperGen - method: analize(java.util.List<compbio.data.sequence.FastaSequence>)]
1433     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1434     [wsgen] [requestWrapper: compbio.data.msa.jaxws.Analize]
1435     [wsgen] [should process method: customAnalize hasWebMethods: false ]
1436     [wsgen] [endpointReferencesInterface: true]
1437     [wsgen] [declaring class has WebSevice: true]
1438     [wsgen] [returning: true]
1439     [wsgen] [WrapperGen - method: customAnalize(java.util.List<compbio.data.sequence.FastaSequence>,java.util.List<compbio.metadata.Option<T>>)]
1440     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1441     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CustomAnalize]
1442     [wsgen] [should process method: presetAnalize hasWebMethods: false ]
1443     [wsgen] [endpointReferencesInterface: true]
1444     [wsgen] [declaring class has WebSevice: true]
1445     [wsgen] [returning: true]
1446     [wsgen] [WrapperGen - method: presetAnalize(java.util.List<compbio.data.sequence.FastaSequence>,compbio.metadata.Preset<T>)]
1447     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1448     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PresetAnalize]
1449     [wsgen] [should process method: getAnnotation hasWebMethods: false ]
1450     [wsgen] [endpointReferencesInterface: true]
1451     [wsgen] [declaring class has WebSevice: true]
1452     [wsgen] [returning: true]
1453     [wsgen] [WrapperGen - method: getAnnotation(java.lang.String)]
1454     [wsgen] [method.getDeclaringType(): compbio.data.msa.SequenceAnnotation<T>]
1455     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetAnnotation]
1456     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JABAService]
1457     [wsgen] [ProcessedMethods Interface: compbio.data.msa.JManagement]
1458     [wsgen] [should process method: cancelJob hasWebMethods: false ]
1459     [wsgen] [endpointReferencesInterface: true]
1460     [wsgen] [declaring class has WebSevice: false]
1461     [wsgen] [returning: true]
1462     [wsgen] [WrapperGen - method: cancelJob(java.lang.String)]
1463     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1464     [wsgen] [requestWrapper: compbio.data.msa.jaxws.CancelJob]
1465     [wsgen] [should process method: getJobStatus hasWebMethods: false ]
1466     [wsgen] [endpointReferencesInterface: true]
1467     [wsgen] [declaring class has WebSevice: false]
1468     [wsgen] [returning: true]
1469     [wsgen] [WrapperGen - method: getJobStatus(java.lang.String)]
1470     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1471     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetJobStatus]
1472     [wsgen] [should process method: pullExecStatistics hasWebMethods: false ]
1473     [wsgen] [endpointReferencesInterface: true]
1474     [wsgen] [declaring class has WebSevice: false]
1475     [wsgen] [returning: true]
1476     [wsgen] [WrapperGen - method: pullExecStatistics(java.lang.String,long)]
1477     [wsgen] [method.getDeclaringType(): compbio.data.msa.JManagement]
1478     [wsgen] [requestWrapper: compbio.data.msa.jaxws.PullExecStatistics]
1479     [wsgen] [ProcessedMethods Interface: compbio.data.msa.Metadata<T>]
1480     [wsgen] [should process method: getRunnerOptions hasWebMethods: false ]
1481     [wsgen] [endpointReferencesInterface: true]
1482     [wsgen] [declaring class has WebSevice: false]
1483     [wsgen] [returning: true]
1484     [wsgen] [WrapperGen - method: getRunnerOptions()]
1485     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1486     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetRunnerOptions]
1487     [wsgen] [should process method: getPresets hasWebMethods: false ]
1488     [wsgen] [endpointReferencesInterface: true]
1489     [wsgen] [declaring class has WebSevice: false]
1490     [wsgen] [returning: true]
1491     [wsgen] [WrapperGen - method: getPresets()]
1492     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1493     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetPresets]
1494     [wsgen] [should process method: getLimit hasWebMethods: false ]
1495     [wsgen] [endpointReferencesInterface: true]
1496     [wsgen] [declaring class has WebSevice: false]
1497     [wsgen] [returning: true]
1498     [wsgen] [WrapperGen - method: getLimit(java.lang.String)]
1499     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1500     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimit]
1501     [wsgen] [should process method: getLimits hasWebMethods: false ]
1502     [wsgen] [endpointReferencesInterface: true]
1503     [wsgen] [declaring class has WebSevice: false]
1504     [wsgen] [returning: true]
1505     [wsgen] [WrapperGen - method: getLimits()]
1506     [wsgen] [method.getDeclaringType(): compbio.data.msa.Metadata<T>]
1507     [wsgen] [requestWrapper: compbio.data.msa.jaxws.GetLimits]
1508     [wsgen] compbio/data/msa/jaxws/Analize.java
1509     [wsgen] compbio/data/msa/jaxws/AnalizeResponse.java
1510     [wsgen] compbio/data/msa/jaxws/CancelJob.java
1511     [wsgen] compbio/data/msa/jaxws/CancelJobResponse.java
1512     [wsgen] compbio/data/msa/jaxws/CustomAnalize.java
1513     [wsgen] compbio/data/msa/jaxws/CustomAnalizeResponse.java
1514     [wsgen] compbio/data/msa/jaxws/GetAnnotation.java
1515     [wsgen] compbio/data/msa/jaxws/GetAnnotationResponse.java
1516     [wsgen] compbio/data/msa/jaxws/GetJobStatus.java
1517     [wsgen] compbio/data/msa/jaxws/GetJobStatusResponse.java
1518     [wsgen] compbio/data/msa/jaxws/GetLimit.java
1519     [wsgen] compbio/data/msa/jaxws/GetLimitResponse.java
1520     [wsgen] compbio/data/msa/jaxws/GetLimits.java
1521     [wsgen] compbio/data/msa/jaxws/GetLimitsResponse.java
1522     [wsgen] compbio/data/msa/jaxws/GetPresets.java
1523     [wsgen] compbio/data/msa/jaxws/GetPresetsResponse.java
1524     [wsgen] compbio/data/msa/jaxws/GetRunnerOptions.java
1525     [wsgen] compbio/data/msa/jaxws/GetRunnerOptionsResponse.java
1526     [wsgen] compbio/data/msa/jaxws/JobSubmissionExceptionBean.java
1527     [wsgen] compbio/data/msa/jaxws/LimitExceededExceptionBean.java
1528     [wsgen] compbio/data/msa/jaxws/PresetAnalize.java
1529     [wsgen] compbio/data/msa/jaxws/PresetAnalizeResponse.java
1530     [wsgen] compbio/data/msa/jaxws/PullExecStatistics.java
1531     [wsgen] compbio/data/msa/jaxws/PullExecStatisticsResponse.java
1532     [wsgen] compbio/data/msa/jaxws/ResultNotAvailableExceptionBean.java
1533     [wsgen] compbio/data/msa/jaxws/UnsupportedRuntimeExceptionBean.java
1534     [wsgen] compbio/data/msa/jaxws/WrongParameterExceptionBean.java
1535     [wsgen] Note:       ap round: 2
1536
1537 BUILD SUCCESSFUL
1538 Total time: 10 seconds