wsbuild.xml

   1 <?xml version="1.0" encoding="UTF-8"?>\r
   2 \r
   3 <project default="build-server" name="compbio-ws" basedir=".">\r
   4 \r
   5         <!-- java -->\r
   6         <property name="classes" location="${basedir}/WEB-INF/classes" />\r
   7         <property name="lib.path" location="${basedir}/WEB-INF/lib" />\r
   8 \r
   9         <path id="classes.path">\r
  10                 <pathelement location="${classes}" />\r
  11         </path>\r
  12 \r
  13         <!-- add libraries -->\r
  14         <path id="project.classpath">\r
  15                 <fileset dir="${lib.path}">\r
  16                         <include name="*.jar" />\r
  17                 </fileset>\r
  18         </path>\r
  19 \r
  20         <property name="wsdl.dir" location="${basedir}/webservices/compbio/ws/server/resource" />\r
  21         <property name="clustal.wsdl" location="${wsdl.dir}/ClustalWS.wsdl" />\r
  22         <property name="muscle.wsdl" location="${wsdl.dir}/MuscleWS.wsdl" />\r
  23         <property name="tcoffee.wsdl" location="${wsdl.dir}/TcoffeeWS.wsdl" />\r
  24         <property name="mafft.wsdl" location="${wsdl.dir}/MafftWS.wsdl" />\r
  25         <property name="aacon.wsdl" location="${wsdl.dir}/AAConWS.wsdl" />\r
  26         <property name="disembl.wsdl" location="${wsdl.dir}/DisemblWS.wsdl" />\r
  27         <property name="globplot.wsdl" location="${wsdl.dir}/GlobPlotWS.wsdl" />\r
  28         <property name="jronn.wsdl" location="${wsdl.dir}/JronnWS.wsdl" />\r
  29 \r
  30         <taskdef name="wsgen" classname="com.sun.tools.ws.ant.WsGen">\r
  31                 <classpath refid="project.classpath" />\r
  32         </taskdef>\r
  33 \r
  34         <target name="build-server">\r
  35                 <!-- TODO this runs file from Eclipse, but with Ant only this need to depends on clean and build! -->\r
  36                         <property name="server.artifacts.dir" location="${basedir}/webservices/compbio/ws/server/jaxws/" />\r
  37 \r
  38                         <mkdir dir="${server.artifacts.dir}" />\r
  39                         <mkdir dir="${wsdl.dir}" />\r
  40                         <delete quiet="false" verbose="true" failonerror="false">\r
  41                                 <fileset dir="${server.artifacts.dir}">\r
  42                                         <include name="*.java" />\r
  43                                 </fileset>\r
  44                                 <fileset dir="${wsdl.dir}">\r
  45                                 </fileset>\r
  46                         </delete>\r
  47                         <!-- destdir - Where to put generated classes -->\r
  48                         <!-- sourcedestdir -  Where to put generated source files -->\r
  49                         <!-- resourcedestdir - Where to put generated source files -->\r
  50                 <wsgen sei="compbio.ws.server.AAConWS" \r
  51                                         sourcedestdir="${basedir}/webservices" \r
  52                                         destdir="${classes}" \r
  53                                         resourcedestdir="${wsdl.dir}" \r
  54                                         keep="true" genwsdl="true" \r
  55                                         extension="false" \r
  56                                         xendorsed="true"                        \r
  57                                         verbose="true">\r
  58                                         <classpath refid="classes.path" />\r
  59                                         <classpath refid="project.classpath" />\r
  60                 </wsgen>\r
  61                 <wsgen sei="compbio.ws.server.ClustalWS" \r
  62                                         sourcedestdir="${basedir}/webservices" \r
  63                                         destdir="${classes}" \r
  64                                         resourcedestdir="${wsdl.dir}" \r
  65                                         keep="true" genwsdl="true" \r
  66                                         extension="false" \r
  67                                         xendorsed="true"\r
  68                                         verbose="true">\r
  69                                         <classpath refid="classes.path" />\r
  70                                         <classpath refid="project.classpath" />\r
  71                 </wsgen>\r
  72                 <wsgen sei="compbio.ws.server.MuscleWS" \r
  73                                                 sourcedestdir="${basedir}/webservices" \r
  74                                                 destdir="${classes}" \r
  75                                                 resourcedestdir="${wsdl.dir}" \r
  76                                                 keep="true" genwsdl="true" \r
  77                                                 extension="false"\r
  78                                                 xendorsed="true"\r
  79                                                 verbose="true">\r
  80                                                 <classpath refid="classes.path" />\r
  81                                                 <classpath refid="project.classpath" />\r
  82                         </wsgen>\r
  83                 <wsgen sei="compbio.ws.server.MafftWS" \r
  84                                                 sourcedestdir="${basedir}/webservices" \r
  85                                                 destdir="${classes}" \r
  86                                                 resourcedestdir="${wsdl.dir}" \r
  87                                                 keep="true" genwsdl="true" \r
  88                                                 extension="false"\r
  89                                                 xendorsed="true"\r
  90                                                 verbose="true">\r
  91                                                 <classpath refid="classes.path" />\r
  92                                                 <classpath refid="project.classpath" />\r
  93                         </wsgen>\r
  94                 <wsgen sei="compbio.ws.server.TcoffeeWS" \r
  95                                                 sourcedestdir="${basedir}/webservices" \r
  96                                                 destdir="${classes}" \r
  97                                                 resourcedestdir="${wsdl.dir}" \r
  98                                                 keep="true" genwsdl="true" \r
  99                                                 extension="false" \r
 100                                                 xendorsed="true"                        \r
 101                                                 verbose="true">\r
 102                                                 <classpath refid="classes.path" />\r
 103                                                 <classpath refid="project.classpath" />\r
 104                 </wsgen>\r
 105                 <wsgen sei="compbio.ws.server.DisemblWS" \r
 106                                                 sourcedestdir="${basedir}/webservices" \r
 107                                                 destdir="${classes}" \r
 108                                                 resourcedestdir="${wsdl.dir}" \r
 109                                                 keep="true" genwsdl="true" \r
 110                                                 extension="false" \r
 111                                                 xendorsed="true"                        \r
 112                                                 verbose="true">\r
 113                                                 <classpath refid="classes.path" />\r
 114                                                 <classpath refid="project.classpath" />\r
 115                 </wsgen>\r
 116                 <wsgen sei="compbio.ws.server.GlobPlotWS" \r
 117                                                 sourcedestdir="${basedir}/webservices" \r
 118                                                 destdir="${classes}" \r
 119                                                 resourcedestdir="${wsdl.dir}" \r
 120                                                 keep="true" genwsdl="true" \r
 121                                                 extension="false" \r
 122                                                 xendorsed="true"                        \r
 123                                                 verbose="true">\r
 124                                                 <classpath refid="classes.path" />\r
 125                                                 <classpath refid="project.classpath" />\r
 126                 </wsgen>\r
 127                 <wsgen sei="compbio.ws.server.JronnWS" \r
 128                                                 sourcedestdir="${basedir}/webservices" \r
 129                                                 destdir="${classes}" \r
 130                                                 resourcedestdir="${wsdl.dir}" \r
 131                                                 keep="true" genwsdl="true" \r
 132                                                 extension="false" \r
 133                                                 xendorsed="true"                        \r
 134                                                 verbose="true">\r
 135                                                 <classpath refid="classes.path" />\r
 136                                                 <classpath refid="project.classpath" />\r
 137                 </wsgen>\r
 138         </target>\r
 139 \r
 140 \r
 141         <taskdef name="wsimport" classname="com.sun.tools.ws.ant.WsImport">\r
 142                 <classpath refid="project.classpath" />\r
 143         </taskdef>\r
 144 \r
 145         <target name="build-clients">\r
 146                         <property name="client.artifacts.dir" location="${basedir}/webservices/compbio/ws/client/stub" />\r
 147 \r
 148                         <mkdir dir="${client.artifacts.dir}" />\r
 149                         <delete quiet="false" verbose="true" failonerror="true">\r
 150                                 <fileset dir="${client.artifacts.dir}">\r
 151                                         <include name="*.java" />\r
 152                                 </fileset>\r
 153                         </delete>\r
 154                         <wsimport wsdl="${clustal.wsdl}" \r
 155                                 sourcedestdir="${basedir}/webservices/" \r
 156                                 keep="true" extension="false" \r
 157                                 verbose="true" xnocompile="true" \r
 158                                 package="compbio.ws.client.stub" \r
 159                                 quiet="false">\r
 160                         </wsimport>\r
 161                         <wsimport wsdl="${muscle.wsdl}" \r
 162                                 sourcedestdir="${basedir}/webservices/" \r
 163                                 keep="true" extension="false" \r
 164                                 verbose="true" xnocompile="true" \r
 165                                 package="compbio.ws.client.stub" \r
 166                                 quiet="false">\r
 167                         </wsimport>\r
 168                         <wsimport wsdl="${mafft.wsdl}" \r
 169                                 sourcedestdir="${basedir}/webservices/" \r
 170                                 keep="true" extension="false" \r
 171                                 verbose="true" xnocompile="true" \r
 172                                 package="compbio.ws.client.stub" \r
 173                                 quiet="false">\r
 174                         </wsimport>\r
 175                         <wsimport wsdl="${tcoffee.wsdl}" \r
 176                                 sourcedestdir="${basedir}/webservices/" \r
 177                                 keep="true" extension="false" \r
 178                                 verbose="true" xnocompile="true" \r
 179                                 package="compbio.ws.client.stub" \r
 180                                 quiet="false">\r
 181                         </wsimport>\r
 182                         <!--            <xjcarg value="-cp" />\r
 183                                                 <xjcarg pathref="project.classpath" />\r
 184                                                 <xjcarg value="-Xcommons-lang" /> -->\r
 185                                 \r
 186                 </target>\r
 187 \r
 188         \r
 189         <!-- \r
 190         \r
 191         <target name="Build artifacts from schema" description="Test task to generate JaxB commons annotated data classes DOES NOT REALLY WORK">\r
 192                 <taskdef name="xjc" classname="com.sun.tools.xjc.XJCTask">\r
 193                         <classpath refid="project.classpath" />\r
 194                 </taskdef>\r
 195                 <mkdir dir="${basedir}/src/test" />\r
 196                 <xjc schema="${wsdl.dir}/SyncMsaWS_schema1.xsd" destdir="${basedir}/src/test">\r
 197                         <arg value="-Xcommons-lang" />\r
 198                 \r
 199                         <produces dir="${basedir}/src/test" />\r
 200                         <classpath refid="classes.path" />\r
 201                         <classpath>\r
 202                                         <fileset dir="${basedir}/lib">\r
 203                                                  //JAXB2 Basics library \r
 204                                                 <include name="jaxb2-basics-*.jar"/>\r
 205                                                  // JAXB2 Basics library dependencies \r
 206                                                 <include name="jaxb2-basics-runtime-*.jar"/>\r
 207                                                 <include name="jaxb2-basics-tools-*.jar"/>\r
 208                                                 <include name="commons-beanutils-*.jar"/>\r
 209                                                 <include name="commons-lang-*.jar"/>\r
 210                                                 <include name="commons-logging-*.jar"/>\r
 211                                         </fileset>\r
 212                                 </classpath>\r
 213                 </xjc>\r
 214         </target>\r
 215 \r
 216                                         -Xequals\r
 217                                         -XhashCode\r
 218                                         -Xcopyable\r
 219                                         -Xmergeable\r
 220         \r
 221         \r
 222         \r
 223         \r
 224         <target name="build-Clustal-client-from-live-server">\r
 225 \r
 226                 <wsimport wsdl="http://localhost:7979/ClustalWS?wsdl" \r
 227                         sourcedestdir="${basedir}/webservices/" \r
 228                         keep="true" \r
 229                         extension="false" \r
 230                         verbose="true" \r
 231                         xnocompile="true" \r
 232                         package="compbio.ws.client.stub" \r
 233                         quiet="false">\r
 234                 </wsimport>\r
 235         </target>\r
 236 \r
 237         <target name="build-Muscle-client-from-live-server">\r
 238                 <wsimport wsdl="http://localhost:7979/MuscleWS?wsdl" \r
 239                                         sourcedestdir="${basedir}/webservices/" \r
 240                                         keep="true" \r
 241                                         extension="false" \r
 242                                         verbose="true" \r
 243                                         xnocompile="true" \r
 244                                         package="compbio.ws.client.stub" \r
 245                                         quiet="false">\r
 246                 </wsimport>\r
 247         </target>\r
 248 \r
 249 \r
 250         <target name="build-client-jar" description="Pack WS client into a single jar THIS IS EXAMPLE ONLY!">\r
 251                 <echo>Jar file: wsclient</echo>\r
 252                 <delete file="${basedir}/resources/wsclient.jar">\r
 253                 </delete>\r
 254                 <jar jarfile="${basedir}/resources/wsclient.jar">\r
 255                         <fileset dir="${basedir}/WebContent/WEB-INF/classes/" includes="org/pimslims/ws/client/**/*.class" />\r
 256                         <fileset dir="${classes}" includes="org/pimslims/sec/*,org/pimslims/lab/Util.class" />\r
 257                         <zipfileset excludes="META-INF/*.SF" src="D:/workspace/current-pims-web/WebContent/WEB-INF/lib/webservices-rt.jar" />\r
 258                         <manifest>\r
 259                                 <attribute name="Built-By" value="${user.name}" />\r
 260                                 <attribute name="Main-Class" value="org.pimslims.ws.client.FileUploadClient" />\r
 261                                 <attribute name="Class-Path" value="." />\r
 262                                 <attribute name="Implementation-Title" value="PIMS File Upload Web Service Client" />\r
 263                                 <attribute name="Implementation-Vendor" value="The PIMS team" />\r
 264                                 <attribute name="Implementation-URL" value="http://www.pims-lims.org" />\r
 265                         </manifest>\r
 266                 </jar>\r
 267         </target>\r
 268 \r
 269 \r
 270         <target name="run-client-jar" description="THIS IS EXAMPLE ONLY">\r
 271                 <java jar="${basedir}/resources/wsclient.jar" fork="true" failonerror="true" maxmemory="256m">\r
 272                         <arg value="C:/Documents and Settings/pvt43/Desktop/Leeds Sequencing/Copy of Files to up load" />\r
 273                 </java>\r
 274         </target>\r
 275 \r
 276         <target name="run-client-class" description="THIS IS EXAMPLE ONLY">\r
 277                 <java classname="org.pimslims.ws.client.FileUploadClient" fork="true" failonerror="true" maxmemory="256m">\r
 278                         <classpath refid="project.classpath" />\r
 279                         <classpath refid="instrument.classpath" />\r
 280                 </java>\r
 281         </target>\r
 282 -->\r
 283 </project>\r
 284 \r