| 2017-10-03 |
gmungoc | JAL-2738 copy to spikes/mungo |
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| 2017-07-24 |
gmungoc | spike branch updated from latest features/JAL-2446 |
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| 2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
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| 2017-05-29 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
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| 2017-05-23 |
gmungoc | JAL-2490 find features for export as GFF, JAL-2548... |
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| 2017-05-23 |
gmungoc | JAL-2490 tidy code and tests for feature export in... |
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| 2017-05-15 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
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| 2017-05-11 |
kiramt | JAL-2491 First port to applet |
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| 2017-05-05 |
kiramt | Merge remote-tracking branch |
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| 2017-05-05 |
kiramt | Merge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges |
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| 2017-04-25 |
kiramt | JAL-2388 Working hidden regions hide/show in desktop |
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| 2017-04-24 |
kiramt | JAL-2388 Hidden cols separated from column selection... |
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| 2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
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| 2017-04-05 |
gmungoc | JAL-2384 JAL-2371 update ResidueShader on change of... |
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| 2017-03-29 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups |
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| 2017-03-24 |
gmungoc | JAL-2428 use 'correct' name for selected score model |
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| 2017-03-24 |
gmungoc | JAL-1632 TreeChooser renamed CalculationChooser, text... |
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| 2017-03-24 |
gmungoc | JAL-838 move two callers off Comparison.PID and depreca... |
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| 2017-03-23 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
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| 2017-03-16 |
kiramt | JAL-2388 Applied ViewportRanges to code |
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| 2017-02-27 |
kiramt | JAL-2388 Make startRes,startSeq,endRes,endSeq private... |
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| 2017-02-17 |
gmungoc | JAL-2403 constants for "NJ", "AV" |
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| 2017-02-09 |
gmungoc | JAL-1608 menu entry text; enable/disable Create/Remove... |
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| 2017-02-09 |
gmungoc | JAL-2405 enable nucleotide/peptide colour schemes in... |
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| 2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueS... |
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| 2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
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| 2017-01-23 |
gmungoc | JAL-2386 simplify changeColour (doesn't change colour... |
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| 2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project... |
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| 2017-01-17 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-11 |
gmungoc | JAL-2344 FileFormats singleton for formats, FileFormatI... |
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| 2017-01-05 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-05 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
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| 2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
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| 2016-12-14 |
Jim Procter | Merge branch 'patch/JAL-2197_jpredforjnets' into develop |
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| 2016-12-13 |
gmungoc | JAL-2361 adding items to applet colour menus, TCoffee... |
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| 2016-11-25 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-24 |
gmungoc | Distinguish text-only output formats and others (.jar... |
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| 2016-11-24 |
gmungoc | FileFormatI further tweaks, clean compile |
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| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
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| 2016-10-24 |
Jim Procter | Merge branch 'releases/Release_2_10_0_Branch' |
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| 2016-10-24 |
Jim Procter | JAL-2197 add jpredfile as alternative form of jnetfile... |
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| 2016-10-06 |
gmungoc | Merge branch 'develop' into task/JAL-2196pdbeProperties |
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| 2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
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| 2016-10-05 |
Jim Procter | JAL-2189 source formatting |
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| 2016-10-05 |
gmungoc | Merge branch 'develop' into task/JAL-2196pdbeProperties |
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| 2016-09-19 |
gmungoc | JAL-2172 test and code updates for readonly selection... |
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| 2016-09-13 |
gmungoc | JAL-2196 refactor PDBEntry.getProperty,setProperty... |
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| 2016-08-30 |
gmungoc | Merge branch 'develop' into features/filetypeEnum |
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| 2016-08-24 |
gmungoc | JAL-1355 correct 'thereshold' to 'threshold' in message... |
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| 2016-07-19 |
Jim Procter | Merge branch 'develop' into efficiency/JAL-2034_JAL... |
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| 2016-07-18 |
gmungoc | JAL-2099 ensure initial setting of scaleAbove reaches... |
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| 2016-07-12 |
gmungoc | FileFormat enum wip changes |
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| 2016-07-11 |
gmungoc | file format enum wip changes |
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| 2016-05-10 |
gmungoc | Merge branch 'develop' into features/JAL-1956_featureStyles |
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| 2016-03-25 |
Jim Procter | JAL-2034 make Escape/select/deselect operations not... |
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| 2016-02-24 |
gmungoc | JAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles |
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| 2016-01-28 |
gmungoc | Merge branch 'develop' into JAL-1705_trialMerge |
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| 2016-01-11 |
gmungoc | JAL-1989 additional ways to 'mirror' show/hide columns... |
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| 2016-01-11 |
gmungoc | JAL-1989 more unit tests and encapsulation for ColumnSe... |
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| 2015-12-09 |
Jim Procter | JAL-1982 hotfix to prevent NPE with applet launch on... |
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| 2015-11-21 |
gmungoc | JAL-653 JAL-1968 FeaturesFile now handles Jalview or... |
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| 2015-10-22 |
gmungoc | JAL-1932 TrimRegionCommand bug fix, tests and purge... |
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| 2015-10-16 |
Jim Procter | JAL-1925 update source version in license Release_2_9_0b2 |
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| 2015-10-08 |
Jim Procter | JAL-1894 update year/version in copyright |
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| 2015-10-08 |
Jim Procter | Merge branch 'develop' into Release_2_9_0b1_Branch |
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| 2015-10-07 |
Jim Procter | JAL-1894 source formatting |
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| 2015-10-05 |
Jim Procter | Merge branch 'develop' into Release_2_9_0b1_Branch |
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| 2015-09-28 |
gmungoc | JAL-1909 repaint complementary alignment panel after... |
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| 2015-09-22 |
Jim Procter | Merge branch 'develop' into Release_2_9_0b1_Branch |
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| 2015-09-22 |
Jim Procter | Merge branch 'develop' into Release_2_9_0b1_Branch |
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| 2015-09-22 |
tcofoegbu | JAL-1774 house keeping |
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| 2015-09-21 |
tcofoegbu | merge |
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| 2015-09-21 |
tcofoegbu | JAL-1774 modifed warning dialog to use JVDialog rather... |
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| 2015-09-21 |
gmungoc | JAL-1152 set initial state of show alignment/sequence... |
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| 2015-09-18 |
tcofoegbu | JAL-1774 JAL-1506 revised implementaion for clear highl... |
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| 2015-09-14 |
gmungoc | JAL-1865 fixed so initial state of annotation sort... |
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| 2015-09-10 |
Jim Procter | JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... |
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| 2015-09-10 |
Jim Procter | JAL-1645 source formatting and organise imports |
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| 2015-09-09 |
gmungoc | JAL-1619 update applet.currentAlignFrame on any menu... |
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| 2015-09-06 |
Jim Procter | JAL-1645 JAL-1355 UI/i18n: added missing messages,... |
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| 2015-09-03 |
Jim Procter | JAL-1680 JAL-1576 JAL-1233 all conservation and consens... |
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| 2015-08-24 |
gmungoc | remove mentions of non-functional RNAInteraction colour... |
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| 2015-08-07 |
tcofoegbu | JAL-1824 updated caching procedure for pdb entries... |
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| 2015-07-08 |
gmungoc | JAL-1759 merge from develop |
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| 2015-07-06 |
gmungoc | JAL-1799 equivalent logic in applet |
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| 2015-07-01 |
gmungoc | Merge branch 'develop' into features/JAL-1759jmolUpdate |
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| 2015-06-29 |
gmungoc | JAL-1799 adjusted annotation height calculation |
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| 2015-06-26 |
gmungoc | Merge branch 'develop' into features/JAL-1759jmolUpdate |
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| 2015-06-26 |
gmungoc | JAL-1759 updates for Jmol 14.2.14_25.06.11 |
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| 2015-06-22 |
Jim Procter | JAL-1780 JAL-653 Format/AppletFormat import and export... |
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| 2015-06-19 |
Jim Procter | JAL-653 JAL-1780 dropped av.setHasHiddenRows() and... |
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| 2015-06-18 |
Jim Procter | JAL-1780 JAL-653 moved AlignExportSettings reference... |
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| 2015-06-17 |
Jim Procter | Merge branch 'features/JAL-653_gffalignments' into... |
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| 2015-06-17 |
Jim Procter | Merge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments |
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| 2015-06-17 |
tcofoegbu | JAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile |
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| 2015-06-12 |
tcofoegbu | JAL-1641 refactor |
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